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TRANSCRIPT CARD

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  1. Clone 'cien202581' > 
  2. EST 'AHC0AAA197YJ17_RM1' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g42335.01.t

Possible name(s)

SEC23A; SEC23B; SEC24B

Gene model

Boschl.CG.Botznik2013.chrUn.g42335

Location

chrUn [275,956,534 / 275,960,700]

Sequences

Amino acid sequence

Length: 430

>Boschl.CG.Botznik2013.chrUn.g42335.01.p
WYDVEKDNVPHMKKSIKHYESLANRASKNGHIIDVYSCALDQTGLHEVKCCANYTGGIMV
MGDSFNTSLFKQTFQKIFAKDSKGEFNMAFGATLEVKTSREVKVSGIIGPCTSLNARSQC
VSENEIGVGGTSQWKLCGLDSSTTLAVYLEIVNQHNTPIPQGGRGTVQFITNYLHSSGQR
RIRVTTFARSWADPSTGLAHVAASFDQEAAAVVMGRMAIARSQDDGGPDVLRWLDRMLIR
LCQKFGEFSKDAPDTFRFPENFSLYPQFMFHLRRSGFLQVFGHSPDETAYHRYQINRQDL
TNSLIMIQPVLYSYSFNGPPEPVLLDSTSIQQDKILLLDTFFQVLIYHGETIAEWKKQXY
HEQPEYANFKQLMQAPVDDAQDILATRFPIPRYIETQHXGSQARFLLSKVNPSQTHNNMM
WGQQVILWLL

Nucleotide sequence

Length: 1,293

>Boschl.CG.Botznik2013.chrUn.g42335.01.t
GGTACGACGTCGAAAAAGACAATGTTCCTCACATGAAAAAATCAATCAAGGACTACGAAT
CGCTCGCAAACCGAGCTTCCAAAAACGGACACATTATCGACGTGTATTCGTGCGCCTTGG
ATCAAACTGGGCTTCATGAAGTAAAGTGCTGTGCGAACTATACCGGGGGCATCATGGTTA
TGGGCGACTCGTTCAACACTTCGTTATTCAAACAAACATTTCAAAAAATATTTGCTAAAG
ACTCTAAGGGAGAGTTTAACATGGCGTTTGGGGCTACCCTTGAAGTAAAGGCGTCGAGAG
AGGTGAAAGTGAGCGGTATTATCGGGCCTTGCACAAGCCTCAATGCCCGAAGCCAGTGCG
TGTCGGAAAACGAAATCGGTGTCGGCGGCACTTCGCAATGGAAACTGTGCGGGCTGGATT
CGTCTACGACACTGGCTGTTTATCTTGAAATAGTAAATCAGGATAACACACCTATCCCAC
AAGGCGGTCGGGGCACTGTCCAATTCATCACGAATTATCTTCATTCCAGCGGACAGCGTC
GTATTCGCGTCACCACATTTGCGAGAAGGTGGGCTGACCCGTCAACCGGCTTGGCGCATG
TCGCGGCTAGTTTCGACCAAGAGGCCGCCGCGGTCGTAATGGGTAGGATGGCAATAGCGA
GATCGCAAGACGACGGAGGGCCGGATGTTCTTCGGTGGCTGGACAGGATGCTAATTCGAC
TGGGTCAAAAGTTTGGTGAATTTTCTAAGGACGCACCGGATACGTTCAGGTTCCCGGAAA
ATTTCTCGCTATACCCACAGGTCATGTTTCACTTGCGACGGTCCGGTTTTCTTCAAGTTT
TCGGCCACAGCCCAGACGAAACCGCGTACCACCGCTATCAAATCAACAGACAAGATCTGA
CGAATTCCTTAATCATGATTCAACCGGTCCTGTATTCGTATTCCTTCAACGGTCCGCCCG
AGGCCGTTCTTTTGGACAGTACGAGTATTCAGCAGGACAAAATATTGCTCTTGGACACCT
TTTTCCAAGTTTTAATATACCACGGCGAAGCAATCGCGGAGTGGAAGAAACAAGGNTACC
ACGAACAGCCGGAATACGCCAACTTTAAACAATTGATGCAAGCCCCAGTGGACGATGCTC
AGGACATATTGGCGACGCGATTTCCAATTCCAAGGTACATTGAGACGCAGCACGGNGGCA
GTCAAGCGCGCTTCCTGCTGTCCAAAGTCAACCCGTCTCAAACCCACAACAACATGATGT
GGGGCCAGCAGGTGATTCTTTGGTTGCTTTAAG

InterProScan

Gene3D
vWFA_dom_sf (IPR036465) - T[1-76] 1.1E-16
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[1-79] 5.89E-21
PANTHER
Sec23 (IPR037364) - T[1-424] 1.8E-233
Pfam
Sec23/24_trunk_dom (IPR006896) - T[2-78] 7.3E-21
Pfam
Sec23_24_beta_S (IPR012990) - T[89-192] 2.4E-32
SUPERFAMILY
Sec23/24_helical_dom_sf (IPR036175) - T[206-308] 1.01E-42
Pfam
Sec23/24_helical_dom (IPR006900) - T[206-304] 4.8E-24
CDD
Sec23_C (IPR037550) - T[298-418] 1.74824E-80
SUPERFAMILY
Gelsolin-like_dom_sf (IPR036180) - T[309-422] 3.66E-46
Gene3D
ADF-H/Gelsolin-like_dom_sf (IPR029006) - T[312-428] 2.6E-57
Pfam
Gelsolin-like_dom (IPR007123) - T[320-406] 2.2E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SC23A_HUMAN 71.059 % 678 0
SC23B_HUMAN 70.588 % 667 0