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TRANSCRIPT CARD

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  1. Clone 'cicl028k21'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Molecular Tool 'Snail-MO (Imai's 25mer MO)'
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g45825.01.t

Possible name(s)

TAF1B

Location

chrUn [288,000,800 / 288,005,022]

Sequences

Amino acid sequence

Length: 598

>Boschl.CG.Botznik2013.chrUn.g45825.01.p
MPACENCGADDFECIDGMFYCVECETQSQTFQDEQAPDLLADGTFTTRQLKKKKHKEKSD
YGHIWYSVEGYQLVIKAHINALIKIGIDPKLDVVMKQIWFKYVHKTNMASIDSCLPTDSV
PESFLSLRDYYFKHCSKDDAAVSSRKVKLRFSRESKKKGKQLDSDSEWFSVDTEASSAEE
DRLSSSSCPSIGQKKRKRHPRSWCMMKTMSLGKVIAFCYISFRWMGELFTIGDLIHWAES
GRIPYYDAGGCFPNDMKLYQGDDRTFVHARLLQYHEIVFLSRRLHNYIKMPDLPPVNILA
LVGRYLHQLNLPLGLIPLAHRILETINKANWANQSMTHKRRTDLLSSKLPDMIAAAVIII
VLKTCFVLDGDKEWRNNVEMDEICSKHSAHADSCSPFSWRKWVIQQLNYTSASSSTFNDR
SLSDNCFDLHTCMEHYMNVILKGHSYKTERICKNKVNAKEFMEARQAPFKRLVQLQGSSE
IINEKRLQRVDGSDMIKLFGYRGKFCPGNLTSSCVHLLLKSLAYKEESDYIPCRNLTGTT
NLESLPHSYAFVLSLFTDVTKADWELIHDYVSCAEMHLFETDKFTHSSSSSLFEEIEE

Nucleotide sequence

Length: 1,797

>Boschl.CG.Botznik2013.chrUn.g45825.01.t
TGCCTGCCTGTGAGAACTGTGGGGCTGATGATTTCGAATGCATAGATGGAATGTTTTACT
GTGTTGAGTGTGAGACTCAGTCACAAACCTTTCAAGATGAGCAAGCTCCTGACTTACTTG
CTGACGGCACCTTTACCACCAGACAGCTCAAGAAAAAAAAACACAAGGAAAAATCAGATT
ATGGGCACATCTGGTACAGTGTCGAAGGATATCAATTGGTTATTAAAGCTCATATCAACG
CTCTAATAAAAATTGGCATCGATCCAAAGCTTGATGTTGTGATGAAGCAGATTTGGTTCA
AATACGTCCACAAAACAAACATGGCGTCCATTGACTCCTGCTTGCCAACCGACAGTGTTC
CAGAGTCGTTTCTCTCCTTGCGCGATTATTACTTCAAACACTGTAGCAAAGACGATGCAG
CGGTGTCGTCTCGAAAAGTCAAACTGCGTTTTTCTAGAGAGTCAAAAAAGAAAGGCAAGC
AGCTGGACAGTGACTCGGAATGGTTTTCCGTAGATACCGAAGCATCTTCGGCTGAAGAAG
ACCGATTGTCATCCTCGTCGTGTCCGTCAATAGGTCAAAAAAAGCGAAAAAGGCATCCAC
GATCATGGTGTATGATGAAAACAATGTCACTTGGTAAAGTTATAGCATTCTGCTACATTT
CCTTTCGTTGGATGGGTGAATTGTTCACTATTGGAGACCTGATCCACTGGGCGGAGTCTG
GACGAATTCCTTACTATGGCGCAGGTGGATGCTTCCCTAATGATATGAAGCTATATCAGG
GAGATGACCGTACATTTGTGCATGCACGTTTGCTACAATATCACGAGGTTGTTTTTTTGA
GTCGAAGACTCCACAACTACATCAAAATGCCTGATCTTCCTCCAGTCAATATATTAGCGT
TGGTAGGAAGATATTTGCATCAATTGAATTTACCGTTAGGTCTCATACCACTTGCTCACC
GGATCCTTGAAACCATTAACAAAGCAAAGTGGGCAAACCAGAGCATGACTCATAAGAGAA
GAACCGATCTACTTTCCTCAAAACTCCCTGATATGATTGCAGCAGCGGTGATTATAATTG
TACTGAAGACTTGTTTCGTTCTGGATGGAGATAAAGAATGGCGAAATAATGTGGAAATGG
ATGAAATATGCTCTAAGCATTCGGCACATGCCGACAGTTGTTCCCCTTTTAGTTGGAGGA
AATGGGTCATTCAACAACTTAATTACACATCTGCCAGTTCCAGCACTTTCAACGACCGAA
GCTTGTCGGATAACTGCTTCGACCTTCATACTTGCATGGAGCATTACATGAACGTGATCT
TGAAAGGGCACTCGTATAAAACTGAGCGAATTTGCAAGAATAAAGTCAATGCCAAAGAAT
TCATGGAAGCGCGACAAGCCCCGTTTAAACGACTCGTGCAATTGCAAGGGAGTTCCGAGA
TCATCAACGAAAAGAGACTACAAAGGGTTGATGGTAGTGATATGATCAAACTTTTTGGTT
ACAGAGGAAAATTTTGTCCTGGTAATCTCACGTCGTCTTGTGTTCACCTGCTTTTAAAGT
CTCTTGCCTATAAGGAAGAGTCAGATTACATTCCTTGCAGGAATCTCACTGGAACAACGA
ATCTAGAATCTCTACCTCATTCATATGCTTTTGTTCTGAGCCTTTTCACCGATGTAACGA
AAGCAGATTGGGAGCTAATTCATGATTATGTTTCATGTGCTGAGATGCATTTGTTTGAAA
CAGACAAATTTACTCACTCTAGCAGTAGTAGTCTCTTTGAAGAAATAGAAGAATAAA

InterProScan

PANTHER
TAF1B/Rrn7 (IPR033599) - T[2-589] 1.3E-73
Pfam
TF_Rrn7_Zf (IPR021752) - T[2-29] 2.1E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TAF1B_HUMAN 24.497 % 104 1.55E-23