Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C5.42.v2.A...'
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g46862.01.t

Possible name(s)

MDH1; MDH1B

Location

chrUn [291,697,897 / 291,706,666]

Sequences

Amino acid sequence

Length: 537

>Boschl.CG.Botznik2013.chrUn.g46862.01.p
MAKFVIAGSSSCPYFAKTELLADQLAINLPHFEIHKIVKPQEQWLTWLQDVCDKNKWAHG
KSPIIWRELVDRGGKGLLIGGFNDFMEYAQCYYGVSSSVMTDLMLKMKAENEKTTKEKLK
EEEDLRNLSKPIHVCITNASSQTAYNLIASVASGEVFGKGVEISLRLFDTRENLKRLHGV
EMEAMDLAYPLLRKIVSTSDIEVAFKDATAVVFLDEVSFQNEKGQTDSRSSWLERNAKLF
QVYGVALNSYALPEVKVIVSGKGPINFNTHVLVDTATDLSKQNIVAASRLQERRMRAIIA
RRLKINSVGVKDAIVWGDCAYDGAERTHADVSIARCHGYDGAVWGPEWFSRSAVEMIHDD
KWLSDEFVSELKSHHEDMNGILNHETSTSSASALSSLMRDWFQGTGNGEIYSLGVESEGW
YGVKGCVFSLPVKFDYAGSYQVVWDIAVSEEAKKKIAELEIQLKKDIMEVFPEQVQIEEQ
KVFGDNSETPVLHESAAKPLADKLEIIEEENENSNEGETKEEAGDEPTEKINTDEEI

Nucleotide sequence

Length: 1,614

>Boschl.CG.Botznik2013.chrUn.g46862.01.t
TGGCGAAATTCGTGATTGCGGGTTCGAGCAGCTGTCCATACTTTGCGAAAACCGAACTTC
TAGCCGACCAGCTCGCCATAAATCTACCACATTTTGAGGTCCATAAAATCGTGAAACCGC
AGGAACAGTGGCTGACGTGGTTACAGGATGTTTGCGATAAGAATAAATGGGCGCATGGTA
AAAGCCCTATTATTTGGAGGGAGCTTGTGGACCGAGGAGGCAAAGGTTTGCTGATTGGAG
GATTCAATGACTTCATGGAATACGCGCAGGGTTACTACGGCGTCAGTTCGAGCGTCATGA
CGGATCTCATGTTGAAAATGAAGGCAGAAAACGAGAAAACAACAAAGGAAAAACTGAAGG
AAGAAGAAGACCTCCGTAATCTCAGCAAGCCGATCCACGTCTGCATCACAAAGGCATCAA
GCCAGACCGCCTACAATCTAATCGCATCCGTCGCCAGCGGAGAAGTGTTTGGGAAAGGGG
TCGAGATTTCTCTGAGGCTATTTGACACGCGAGAAAACTTGAAAAGACTCCACGGCGTGG
AAATGGAGGCGATGGATCTGGCTTACCCTTTGTTACGTAAGATCGTATCGACGTCCGACA
TTGAAGTTGCATTCAAGGACGCCACAGCCGTGGTTTTTCTGGACGAAGTCTCGTTTCAGA
ATGAAAAAGGACAAACTGACTCGAGGTCATCTTGGTTAGAACGAAACGCAAAACTGTTCC
AAGTCTACGGCGTGGCTCTCAACAGTTACGCTCTGCCAGAAGTGAAGGTCATTGTTTCCG
GCAAAGGCCCGATTAACTTCAACACTCACGTGCTCGTTGACACTGCCACGGATTTATCGA
AACAGAATATTGTCGCAGCTTCACGATTACAGGAAAGGCGTATGCGAGCCATAATTGCCC
GCAGATTGAAAATCAATTCTGTCGGGGTAAAGGACGCAATCGTTTGGGGTGATTGCGCTT
ACGACGGGGCTGAAAGGACCCACGCCGATGTTTCGATTGCGCGTTGCCATGGTTATGACG
GAGCTGTTTGGGGTCCGGAATGGTTTTCAAGATCTGCGGTGGAAATGATTCATGACGAGA
AATGGCTTTCTGACGAATTCGTGTCTGAGCTGAAAAGTCACCACGAGGATATGAACGGAA
TTTTAAATCACGAAACAAGCACGAGTTCCGCATCGGCGCTGTCCTCGCTCATGCGCGACT
GGTTTCAGGGCACTGGGAACGGAGAAATTTACTCGTTGGGAGTAGAAAGTGAAGGCTGGT
ACGGCGTCAAAGGCTGCGTGTTCTCTCTCCCTGTCAAGTTTGATTATGCCGGAAGCTATC
AAGTCGTTTGGGACATCGCTGTCAGCGAAGAGGCCAAAAAGAAAATCGCGGAACTGGAAA
TTCAATTGAAAAAGGATATCATGGAGGTATTCCCTGAGCAGGTCCAGATTGAAGAGCAAA
AGGTGTTTGGTGACAACTCGGAGACTCCGGTGTTGCACGAATCTGCGGCGAAACCACTTG
CGGATAAACTTGAAATTATCGAGGAAGAAAACGAAAATTCAAATGAAGGAGAAACGAAGG
AAGAAGCCGGGGATGAACCGACAGAAAAAATAAACACGGACGAAGAAATATAGC

InterProScan

PANTHER
Malate_DH_type2 (IPR010945) - T[5-478] 2.5E-166
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[102-286] 5.91E-22
Pfam
Lactate/malate_DH_N (IPR001236) - T[136-284] 2.9E-9
Gene3D
Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[288-478] 6.3E-36
SUPERFAMILY
Lactate_DH/Glyco_Ohase_4_C (IPR015955) - T[289-465] 8.18E-23
Pfam
Lactate/malate_DH_C (IPR022383) - T[292-471] 7.1E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MDH1B_HUMAN 41.189 % 324 5.23E-105
MDHC_HUMAN 34.091 % 152 8.66E-42