Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Region 'REG00000065' > 
  2. Clone 'cima877581' > 
  3. Clone 'cima841o09' > 
  4. Transcript 'KH2012:KH.C1.102.v1....' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g47984.01.t

Possible name(s)

MOSPD2; VAPA; VAPB

Gene model

Boschl.CG.Botznik2013.chrUn.g47984

Location

chrUn [298,274,494 / 298,276,694]

Sequences

Amino acid sequence

Length: 90

>Boschl.CG.Botznik2013.chrUn.g47984.01.p
MSRPKQQQILKIEPPTELKFKGPFNDVVTSHLHLANPSDKRVCFKVKTTAPRRYCVRPNS
GFIDSDASVTISGQDSGDVGQGYSTGGRVG

Nucleotide sequence

Length: 273

>Boschl.CG.Botznik2013.chrUn.g47984.01.t
AATGTCCCGCCCGAAGCAGCAACAAATTTTGAAGATTGAACCTCCGACTGAACTCAAGTT
CAAAGGACCGTTTAACGATGTCGTGACGTCCCACCTCCATCTCGCCAACCCATCGGACAA
GAGGGTCTGCTTCAAAGTAAAGACAACGGCACCCAGGCGATACTGCGTCCGGCCCAATAG
CGGATTCATTGACAGCGATGCGTCGGTCACTATATCAGGTCAGGACAGTGGCGATGTAGG
CCAGGGCTACTCAACTGGGGGCAGAGTTGGATA

InterProScan

Gene3D
Ig-like_fold (IPR013783) - T[2-74] 2.2E-29
PANTHER
VAP (IPR016763) - T[5-72] 5.2E-33
SUPERFAMILY
PapD-like_sf (IPR008962) - T[6-71] 1.81E-25
ProSiteProfiles
MSP_dom (IPR000535) - T[9-90] 21.772
Pfam
MSP_dom (IPR000535) - T[10-72] 3.7E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VAPA_HUMAN 72.059 % 110 1.52E-31
VAPB_HUMAN 67.647 % 105 6.46E-30