- Transcript 'Moocci.CG.ELv1_2.S61...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S101.g13415.01.t
Possible name(s)
CHDH
Gene model
Location
S101 [72,942 / 87,267]
Amino acid sequence
Length: 641
>Harore.CG.MTP2014.S101.g13415.01.p
MLRRAFVILVLSVISHKIYVSYMSITTENADEEYDFIIVGGGNTGAVVANRLSENETYKV
LVLEAGPEYFLNPLMNLPTLSILDKQHNWNYVTESQNFGADALIDEVLSVPRGKVLGGTS
SINYQLYMRGSHHDYDSWQENGATGWSYKEVLPYFMKSENADHYDLVDREFHGQDGPVHV
SYTAKVGITEAMLTAGKEIGLKYISDSNGESKLGISVAQVTTKSGLRQSSASSYLYPVAH
SRKDRLHIVTKAHTTRIMFEENDNDVRAVGVTYRKNGEDKVVRVKREIIMCAGVYGTPQL
LMLSGIGPKNHLEGLKIPIVKDLPGVGSNLQEHPFVPLHFHATNLSYGDIYGIKELIFGL
PKYLMTGEGIFAGDGTVVVYLDKNFSDGATQREELRPEFQYLFIPIEVSTLVYKLVNMKL
FNYKPDWFPKWNDGWVKWAMERSWKALMENGTIQGYVCLIQNCEEPLSKADNERGGSFTS
FFVYIKLLHEKSRGFVRLASSDPFSHPKIDPKLLTHPDDLAGLVKALKWIGEWTKTESFK
RLGVDIFSIHGECESKTKFSEEYYECIIRQQVELYHGCCTAKMGRADDKMAVVDSKLRVY
GISGLRVADASVFPNHISSPPQATCYMIGEKAADLIKESWQ
Nucleotide sequence
Length: 2,419
>Harore.CG.MTP2014.S101.g13415.01.t
ATCTATATCAACAAAACTTTCCATTATCACTTACCCAATGCTAAGTTATTTAGTTTACTC
CTTATAGTACTACTAACAAGTATATTCACACTTTGAACCATCAGTAACAATTAATTTGAA
TTAGTGCTGTTTTACGGTTATGTGACTAAAAAGGACCACCACATTTCTCATTGTAACCAT
TGCATTATTTATGACCTGCGAAAAACTATGCCTCCAATTTATAAGCAGAGAATTTAGATG
GGAGCAAGTCCTACAATATGTTAAGAAGAGCATTCGTTATCCTGGTATTGTCAGTTATAT
CACACAAAATATATGTTAGCTATATGAGCATAACGACTGAAAATGCAGATGAAGAATACG
ATTTCATTATCGTGGGAGGTGGTAATACTGGAGCTGTTGTTGCGAATCGCTTGAGTGAGA
ATGAAACCTATAAAGTTCTGGTTTTGGAAGCTGGACCAGAATATTTTCTGAACCCTCTCA
TGAACCTTCCAACTTTATCCATTCTTGATAAACAACACAATTGGAATTATGTTACAGAGA
GTCAAAATTTTGGAGCAGACGCATTGATCGATGAGGTACTCAGTGTTCCTCGAGGAAAAG
TGCTTGGTGGCACCAGCTCAATCAATTATCAATTGTACATGCGTGGAAGTCATCATGACT
ACGATTCGTGGCAAGAAAATGGTGCTACAGGCTGGTCGTACAAAGAGGTGTTGCCCTATT
TCATGAAGTCCGAAAACGCTGACCATTATGACTTAGTCGATAGAGAATTTCATGGTCAAG
ATGGACCTGTGCATGTTAGTTACACTGCCAAAGTGGGTATTACTGAAGCTATGCTTACTG
CAGGAAAAGAAATTGGGTTGAAGTATATCAGTGATTCAAATGGAGAATCCAAATTGGGAA
TTTCTGTTGCACAGGTTACAACGAAAAGTGGCCTTCGACAATCTTCCGCTTCTAGCTACC
TTTATCCTGTTGCTCATTCCAGGAAGGATCGTCTCCATATTGTGACCAAGGCTCACACAA
CTAGGATCATGTTTGAAGAAAATGATAATGATGTGAGGGCAGTTGGTGTAACCTACAGAA
AAAATGGAGAAGATAAAGTTGTGAGAGTAAAAAGAGAAATAATTATGTGTGCGGGTGTAT
ATGGAACCCCTCAATTGTTAATGCTATCTGGCATAGGACCTAAAAATCACCTTGAAGGTC
TCAAAATCCCAATAGTTAAAGATTTACCTGGCGTGGGGTCCAATTTACAAGAACATCCAT
TTGTGCCATTGCATTTCCATGCAACCAATCTCTCTTATGGTGACATCTATGGTATAAAAG
AGCTTATCTTCGGCCTGCCAAAATATCTCATGACAGGTGAAGGTATCTTTGCTGGTGATG
GTACTGTAGTTGTTTATTTAGATAAGAATTTCAGTGATGGCGCTACACAAAGGGAAGAAC
TGAGACCAGAGTTTCAATATTTGTTCATTCCAATCGAGGTTTCAACATTAGTATATAAAT
TGGTGAACATGAAACTTTTCAACTACAAACCAGATTGGTTCCCAAAGTGGAACGATGGGT
GGGTGAAGTGGGCGATGGAAAGATCCTGGAAGGCGTTGATGGAAAATGGGACTATACAGG
GATATGTTTGTCTTATACAGAATTGTGAAGAACCGTTATCAAAAGCTGATAATGAACGTG
GAGGCAGCTTCACCTCCTTCTTTGTGTACATTAAACTTCTGCATGAAAAAAGCAGAGGTT
TCGTGCGTCTGGCATCCTCTGATCCTTTTTCACATCCCAAGATTGATCCAAAATTGCTCA
CTCATCCTGATGATCTTGCTGGACTCGTGAAAGCATTAAAGTGGATTGGAGAGTGGACAA
AAACCGAGTCATTCAAAAGACTGGGTGTTGATATTTTTTCAATACATGGAGAATGCGAGA
GCAAGACAAAATTCAGTGAAGAGTATTATGAATGCATTATTCGCCAGCAAGTCGAATTAT
ACCATGGCTGCTGCACAGCAAAAATGGGACGTGCTGATGATAAGATGGCAGTGGTTGATT
CAAAACTACGAGTTTATGGAATCAGCGGACTTCGTGTAGCTGATGCCTCTGTTTTCCCAA
ATCATATATCTTCTCCACCCCAAGCCACTTGCTATATGATTGGGGAAAAAGCTGCAGATT
TAATCAAAGAAAGCTGGCAGTAATCAAGATCCATTCAAAAGACTCTGACCAGTAAGACCA
GTAACCTTCGCTGACTCATCGTTGAGATTCTACTGGATGTCAAGCTGATGAGGCACTTAA
AGTAGATAACAAAGGTGCAGCCCCTGAAGAAGACATCTTTGCAAATGAGAACGACTGAAC
GAAATCATGAATGACGAAGAATATGCCAAGCTGCATTCTATGTCAATTGCGTGATATTGG
GAATAAAAATTTCTTCAGC
| PIRSF |
GMC_OxRdtase (IPR012132) - T[13-354] 1.6E-92 - T[443-641] 3.0E-54 |
| SUPERFAMILY |
FAD/NAD-bd_sf (IPR036188) - T[15-327] 4.46E-79 - T[579-640] 4.46E-79 |
| Pfam |
GMC_OxRdtase_N (IPR000172) - T[34-334] 6.6E-75 |
| ProSitePatterns |
GMC_OxRdtase_N (IPR000172) - T[113-136] . |
| Pfam |
GMC_OxRtase_C (IPR007867) - T[491-632] 5.8E-36 |
| Gene3D |
FAD/NAD-bd_sf (IPR036188) - T[567-640] 6.9E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHDH_HUMAN | 34.739 % | 205 | 4.45E-58 |