- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S104.g07353.01.t
Possible name(s)
SEC23A; SEC23B; SEC24B
Gene model
Location
S104 [199,514 / 205,425]
Amino acid sequence
Length: 811
>Harore.CG.MTP2014.S104.g07353.01.p
MCYVIIVARSFLHELELNATTAIALPINIRNNPLQSEMTTYQEYIQQNEDRDGVRCSWNV
WPSSRLEATRIVVPVATLFTPLKERPDLPPIQYEPILCHRQTCRAVLNPLCQVDYRSKIW
TCNFCYQRNPFPASYSAITESHQPAELIPQFTTLEYQIRSPAPVGPVFLFVIDTCMDEED
LEAMKESLQMSLSLLPNNALIGLITFGRMVQVHELGTEGISKSYVFRGTKDLNAKQIQEM
LGLNKIPGGGGAPINPSAPGQQAPNVNAPPVNRFLQPLHKCDMFVTDLLGELQCDPWPVS
QGKRPLRSVGTALSIAVGLLECSFPKVPSRIMLFLGGPGTQGPGMIVDDSLENTMRSWYD
VEKDNIPYMKKSIKHYESLATRAANNGHIIDIYSCALDQTGLHEMKGCPNFTGGIMVMGD
SFNSSLFKQTFQKVFSKDAKGEFNMAFGATLEIKTSREVKISGIIGPCVSLSVKSPWVSE
NEIGVGGTSQWRLCGLDPTTTLAVYFEVVNQHNTPIPQGGRGTVQFITNYIHSSGQHRIR
VTTIARSWADPSTGQVHVAARSFDQEASAVVMARMAIYRSQDDGGPDVLRWLDRMLIRLC
QKFGEFQKDAPDTFRFAENFSLYPQFMFHLRRSSFLQVFGHSPDETAYHRYQINHQDLTN
SLIMIQPVLYSYSFNGPPEPVLLDSTSIQPDKILLLDTFFQVLIFHGDTIAQWKKASYQD
QPQYENFKQLLQAPVDDAQDILATRFPIPRYIETQHGGSQARFLLSKVNPSQTHNNMMWG
QQDGSAPVLTDDVSLQVFMDHLKKLAVSSAT
Nucleotide sequence
Length: 2,767
>Harore.CG.MTP2014.S104.g07353.01.t
ATGTGCTATGTTATTATAGTTGCCCGTTCTTTCTTGCATGAACTGGAACTGAACGCTACA
ACGGCAATCGCATTGCCTATAAATATTAGGAATAACCCACTACAAAGTGAAATGACTACG
TATCAAGAATATATTCAACAAAACGAGGACAGAGATGGAGTCAGATGCAGCTGGAATGTA
TGGCCTTCTTCTCGCTTGGAGGCAACAAGGATAGTTGTTCCGGTGGCAACACTTTTTACC
CCGCTGAAGGAACGTCCTGACTTGCCACCTATTCAGTACGAACCCATACTGTGTCATCGT
CAAACTTGTCGAGCTGTTTTGAATCCGTTATGTCAAGTGGATTACCGCAGCAAGATATGG
ACCTGCAATTTCTGTTACCAAAGAAACCCGTTTCCTGCAAGCTACAGTGCCATCACTGAA
TCCCATCAACCAGCTGAACTCATACCGCAATTCACGACACTAGAATACCAGATACGCAGC
CCGGCTCCCGTAGGCCCGGTGTTTCTGTTTGTCATTGACACCTGCATGGATGAAGAAGAT
CTTGAAGCTATGAAAGAGTCTCTTCAGATGTCTCTAAGCCTCTTGCCAAATAATGCTCTG
ATAGGCCTTATCACTTTTGGTAGAATGGTCCAGGTGCATGAACTGGGAACCGAGGGGATC
TCAAAGAGCTATGTCTTTCGTGGTACTAAGGATTTGAATGCCAAGCAAATACAGGAGATG
CTTGGTCTAAATAAAATCCCAGGTGGAGGAGGAGCGCCAATAAATCCAAGTGCTCCTGGG
CAGCAAGCTCCTAATGTAAATGCACCTCCTGTGAATAGGTTTCTGCAACCCCTTCACAAA
TGTGACATGTTTGTAACCGATTTGCTTGGAGAACTACAGTGTGACCCTTGGCCTGTGTCC
CAGGGAAAACGACCTTTGAGATCTGTCGGAACCGCCCTTTCGATTGCTGTCGGTTTACTT
GAGTGCTCATTTCCCAAAGTTCCCTCAAGAATTATGCTGTTTCTCGGTGGTCCAGGAACA
CAGGGGCCTGGGATGATAGTGGATGATAGCCTTGAGAATACAATGAGATCTTGGTATGAT
GTTGAAAAGGATAATATTCCTTACATGAAGAAGTCTATCAAGCATTATGAATCCCTCGCA
ACCAGAGCTGCTAACAATGGCCATATCATTGATATATATTCCTGTGCTTTGGATCAAACA
GGTCTTCATGAAATGAAGGGATGCCCCAATTTCACTGGTGGAATCATGGTTATGGGAGAC
TCGTTCAATTCATCTCTGTTCAAGCAGACCTTTCAAAAAGTATTCTCCAAGGATGCGAAA
GGGGAATTTAATATGGCTTTTGGAGCAACCCTTGAAATAAAGACATCCAGAGAGGTTAAA
ATCAGTGGAATAATAGGACCTTGCGTCAGTCTGAGCGTTAAAAGCCCTTGGGTATCTGAA
AACGAGATAGGAGTAGGGGGCACGAGCCAGTGGAGGCTTTGTGGATTGGATCCAACAACA
ACCTTAGCTGTCTACTTTGAAGTTGTTAACCAGCACAACACACCTATTCCACAAGGTGGC
AGAGGAACAGTACAATTTATCACAAATTACATCCATTCAAGCGGACAGCACAGAATTCGA
GTGACAACTATTGCGAGAAGCTGGGCAGACCCTTCTACTGGCCAAGTCCATGTAGCCGCA
AGAAGCTTCGATCAAGAGGCTTCTGCCGTTGTCATGGCAAGAATGGCAATTTACAGATCA
CAGGATGACGGTGGACCAGATGTTTTGAGATGGTTGGACAGAATGTTAATCAGACTTTGT
CAAAAATTTGGAGAATTCCAAAAAGACGCTCCTGACACATTCCGTTTCGCTGAAAATTTC
TCACTCTATCCACAGTTCATGTTTCATCTTCGGAGATCAAGTTTTCTTCAAGTATTCGGT
CACAGTCCCGACGAGACCGCATATCATCGGTATCAGATCAATCACCAAGATCTTACCAAC
TCTCTCATTATGATACAGCCTGTATTATACTCCTATTCATTCAATGGCCCGCCAGAGCCT
GTGCTTCTGGACAGCACTAGCATTCAACCGGACAAAATTCTTCTTCTGGACACTTTTTTC
CAAGTTTTAATTTTCCATGGAGACACTATTGCACAATGGAAAAAGGCATCTTATCAGGAT
CAGCCACAATATGAAAATTTCAAACAACTGCTGCAAGCTCCAGTCGACGATGCTCAAGAC
ATTCTTGCAACTCGCTTTCCAATTCCGAGGTATATTGAAACACAGCATGGTGGCAGTCAA
GCCAGGTTTCTTCTCTCCAAAGTGAATCCATCCCAGACACATAATAATATGATGTGGGGT
CAACAGGATGGTTCTGCACCCGTTCTGACTGATGATGTAAGTTTACAAGTTTTCATGGAT
CATCTGAAGAAACTTGCGGTATCCAGTGCTACATAACAGAATGAATCAAAATTAAGAAGC
GTTGTAATATAATTTACATCTAAAATGTAACTGACTATATGGTTAAGTTAAAAGATATTA
TAAGTTTACAATAAATGTGCTTGGAATAGGAAGTACAGTATGAAGGGATGTAGTGTATTT
TTTTGCTCAGTATAAAGTTACTCTTGGATCAACATGGTTGCCTGTTTATAAAACCGTCAT
ATTATCACTGTTATATCGAAGGAGAAACAAATTAGAATTCCTATTATATTGAATAAAATG
AAAGCATGGTAGTCTGAAACAGTGCAGTGCAAACTTATGGGTTTTTGGCAGTTGTAGTAT
TGATCAT
| PANTHER |
Sec23 (IPR037364) - T[38-809] 0.0 |
| SUPERFAMILY |
Znf_Sec23_Sec24_sf (IPR036174) - T[86-159] 2.75E-20 |
| Pfam |
Znf_Sec23_Sec24 (IPR006895) - T[95-135] 9.0E-15 |
| Pfam |
Sec23/24_trunk_dom (IPR006896) - T[165-435] 3.4E-73 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[165-445] 4.4E-204 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[166-437] 5.68E-84 |
| Pfam |
Sec23_24_beta_S (IPR012990) - T[446-549] 2.3E-31 |
| SUPERFAMILY |
Sec23/24_helical_dom_sf (IPR036175) - T[564-666] 1.28E-42 |
| Pfam |
Sec23/24_helical_dom (IPR006900) - T[564-662] 9.3E-24 |
| CDD |
Sec23_C (IPR037550) - T[656-776] 7.55195E-80 |
| Gene3D |
ADF-H/Gelsolin-like_dom_sf (IPR029006) - T[666-770] 4.2E-114 |
| SUPERFAMILY |
Gelsolin-like_dom_sf (IPR036180) - T[667-807] 2.62E-56 |
| Pfam |
Gelsolin-like_dom (IPR007123) - T[678-764] 1.7E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC23A_HUMAN | 73.29 % | 1211 | 0 |
| SC23B_HUMAN | 71.08 % | 1170 | 0 |