Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cima018i06' > 
  2. Transcript 'KH2012:KH.C14.261.v1...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S105.g00538.02.t

Possible name(s)

ECHDC2; ECHS1; HIBCH

Gene model

Harore.CG.MTP2014.S105.g00538

Location

S105 [54,577 / 59,753]

Sequences

Amino acid sequence

Length: 407

>Harore.CG.MTP2014.S105.g00538.02.p
MWCPGSAHRLDIIFRHLTYNRCCPSLMRKPILKPSYSINRCSKESIRRMSSSSAEDVILE
KFGTKGVITLNRPKALNALNLSMIKKIYPKLKEWEEDPEMTMIIIKATGGKAFCAGGDIL
AITEAGKKGDVATGAEFFSSEYQLNHAIGTCVIPYIAFISGITMGGGVGLSVHGQFRVAT
EKTVFAMPETAIGLFPDVGGSYVLPRIGGKLGLYLALTGYRLRGRDVYKAGIATHMVDSA
VLPNLEKDLLAMENPGTQDIMDLLRRYHLECKTGREQDFILNDKLNDIDRLFCGETMEEI
MKNLEEEGTDWAKETYAALKKMSPTSLKITLRQLSTGAGLSLPDCFVMESRMGRGCLRNH
DFYEGVRAVLVDKDHAPKWKPDTLEGVSQELVDDHFSLADGDIDLSL

Nucleotide sequence

Length: 2,271

>Harore.CG.MTP2014.S105.g00538.02.t
AGGCAACTTTTTCATCTAGTTCTGTTGCAAGCAACAAGGTAGGTGCATATTTTCAATGAC
GAAGCACCTTAATCCTTATCGTCTCGAGCAAGCTGCCAAGAGTACGTCTGAATATAGCTC
TGGTCGTTTTAATCCATTTGCAAAAAATTTGTGGGGTTGGATAATCGCACTCCCATCTGC
CGTATTCGTTTTCATTCAACTGAAGAAAAGTATCGACAAGAGACGCTTAGAAGATCTTAA
AGTCATTCAGCGTATGAGACGTGCAGAGCGTGGTGAATTATAACAATCAATTTTCTACAT
AAAGCACCATGTGGTGTCCAGGATCTGCTCACAGACTTGACATAATATTCAGGCACCTGA
CCTATAATAGATGTTGTCCTTCATTAATGCGGAAACCTATCTTAAAACCCAGTTATTCAA
TAAATCGATGTTCAAAGGAAAGTATAAGAAGGATGTCTTCCAGTTCTGCTGAAGATGTTA
TTTTAGAAAAATTCGGTACAAAGGGTGTCATTACGCTCAACAGGCCAAAGGCATTGAATG
CTTTAAATCTCAGCATGATAAAAAAAATCTATCCCAAGCTTAAAGAGTGGGAAGAAGATC
CGGAGATGACGATGATCATAATTAAAGCTACAGGCGGGAAAGCGTTTTGTGCCGGAGGGG
ACATTCTCGCCATCACGGAAGCGGGAAAGAAAGGGGATGTTGCAACAGGAGCAGAATTTT
TCAGTTCAGAATACCAGTTAAATCACGCCATTGGAACATGCGTTATACCTTACATAGCTT
TTATAAGCGGGATAACAATGGGAGGAGGAGTTGGCCTTTCCGTGCACGGTCAATTCCGAG
TCGCAACGGAGAAGACTGTGTTTGCAATGCCGGAAACTGCAATAGGTCTCTTCCCTGATG
TCGGAGGGTCCTACGTTCTGCCACGCATCGGTGGGAAACTGGGTCTTTACCTAGCCCTGA
CCGGATACAGATTACGAGGTAGGGACGTTTACAAGGCCGGGATCGCCACCCATATGGTTG
ACAGCGCCGTCTTACCCAACTTAGAAAAGGATTTGCTGGCCATGGAAAATCCTGGAACAC
AAGACATCATGGATCTCTTGAGGAGATATCATCTGGAGTGTAAAACTGGACGAGAGCAAG
ACTTCATTCTCAACGATAAATTGAATGATATTGACCGATTGTTTTGTGGGGAAACGATGG
AAGAAATTATGAAGAACTTGGAAGAAGAAGGAACAGATTGGGCCAAGGAAACTTATGCGG
CTTTGAAAAAGATGTCGCCAACTTCGTTGAAGATTACCTTGCGTCAGCTCTCCACCGGTG
CCGGATTGAGTCTGCCTGACTGTTTCGTAATGGAATCAAGAATGGGACGTGGTTGTCTCA
GAAATCACGACTTTTATGAAGGCGTTCGAGCCGTGCTGGTCGATAAGGATCATGCGCCAA
AATGGAAACCAGACACGTTGGAGGGTGTGAGCCAGGAGTTAGTTGATGATCATTTCTCTT
TGGCTGATGGAGATATAGACCTTTCCCTCTAGTTTTTTTACCCTCGACTCTGTACCAGTA
CTGGACTTGCGGTAGAACTTGCTTATAAGTTTTTTATGGTATAGCGGTTAACCTAAGCCA
ATGTGTAATTACATTGAACGCTAGGCTAATTATTAAAGCACAAACAGTATTGAAATATGC
ATTCTGGGTTTGCTTGATTGCAATTAGAATTGGAAGCAAGGTCTTCTGTGAATTGTAAAA
AAAATGCAAAAGCATACTGTGATGCGTTGGATAGTATACTCTGTAGGCAGTAAACTAGTA
AATTTATCTTGTATTTGTATCTATATCTTAGTTACAGTAGCTATGAAAGATATATGTAGT
TGTTCATCATTGAATAGATGACCACTGGGCATGTAATACAGTTCATATACATTCTGTAAT
TCTTTCCTAGCGCTTATCCTAGATTTGCTTAAGTCAGTCAGTTGTCAAGATTTGTTGAAA
GATATGCAAAACCAATAAACTTCACTGTAGTAGCAGTAGCCTCACCACCCAGCGTAATTA
AAAACTTTAGTTCCAACGATTTCATTCATTGGTTCTGTCCTGATTTATTTCCTCGACTCA
TAATAGCTATTTTACCCACACAGTGATTTTGAATAGCTAGTGCTCGGTATTGAATGGACT
GTTTGCTATTCAATGTTAACAATATAGGTACAGTACTAGATAAATTTTCTATTTTAGATG
CCATGTTATTTTTAATTTGTCGTTAATTCAATAAAAAATTGTTTTGATTAG

InterProScan

SUPERFAMILY
ClpP/crotonase-like_dom_sf (IPR029045) - T[53-239] 2.49E-65 - T[306-383] 2.49E-65
Pfam
HIBYL-CoA-H (IPR032259) - T[66-396] 8.0E-133

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ECHD2_HUMAN 31.868 % 82.4 1.15E-17
HIBCH_HUMAN 58.449 % 439 1.51E-153