- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S105.g01421.01.t
Possible name(s)
IPO5; KPNB1; TNPO1
Gene model
Location
S105 [130,381 / 139,422]
Amino acid sequence
Length: 833
>Harore.CG.MTP2014.S105.g01421.01.p
MATLVQILDKTVSPDPKELNEAQAFLEHAAQENLAGFLVGLCQVLASPVNSQVSRMAAGL
QVKNYITSKDQTVKTQHQQRWLALDENSKNEVKKLVLQALGTESTRPSSAAHVIAGIACA
EIPRGQWQELIPNLVQYVTAENSTEQVKEAALEAIGYICADMELTHLLVHANIILTAIVQ
GMRKQEPSYHVKLAATNAMLNSLEFTSANFEKETERHFIMQVICEATQMDDAKGEIRVAA
LQCLVKIMSLYYQYMETYMGPALFAITVEAMKSNDDNVCLQGIEFWSNVCDEELDLSIEM
AEAEEMGRPPERTSKFYAKGALPYLIPILTNILAQQDEMDDEDDWNPSKAAGVWSILEGP
SPDQLSPILEQGMPTFIKLLKDDCVVVRDTTAWAIGRICELIPETVINEKYLMILLEAMI
ESLTAEPRVATNICWAFSSLAEAAYDVASGNGGEEPETYMMSKVYENIIQKLLLTTERND
GHQNNLRSSAYEAVMEMIKNSPKDCYDTVLKTTTHIMQRIHDLLNMESLLCATLQSVLRK
VKQEHVASIADNVMGSLLRMLSSGSGGVQEDALLAVGTLIEVVGENFVAYMPAFKEYLFS
GLRNHAEYQVCIVAVGVVGDICRAIGHKIMDHCDAIMTALLENLSDANVHRSVKPHILSV
FGDIALAIGPDFKKYLEIVLGTLQQAAQAQVDKSDYDMVDYFNELREGCLETYTGIIQGL
KGDKKELSADVFLLKDHIHFMLLFVESIAMDEDRSEGVVAAAAGLIGDLCTAFGQTYGPT
LLGYLDAKPKISDLLTEGRRSKTSKTKSLALFLRCCLNLSSFWHLPPILQSPD
Nucleotide sequence
Length: 2,713
>Harore.CG.MTP2014.S105.g01421.01.t
TGATCGATTTTCATTTCTCAGATTCGAGGTTAAATTTGGCGAAATCTGTTTCTTTGATAA
TTTTTCATTTCATGGTGATCGTTTTAGTCCAGCGAAAGATAATCAACCACCACCATGGCC
ACTCTCGTCCAAATATTAGATAAAACTGTCTCTCCAGATCCGAAGGAGCTAAATGAAGCC
CAGGCCTTTCTTGAGCATGCAGCCCAAGAAAATCTGGCAGGCTTTCTAGTAGGCCTTTGC
CAAGTGCTAGCGTCGCCGGTGAATAGCCAGGTCTCTCGCATGGCTGCCGGTCTGCAGGTG
AAAAATTATATCACATCAAAAGATCAAACAGTAAAAACGCAACATCAGCAACGTTGGCTT
GCTTTGGATGAAAATTCAAAGAATGAAGTTAAAAAACTGGTTCTTCAAGCCTTGGGAACT
GAATCAACACGACCTTCCTCTGCTGCCCACGTCATTGCTGGGATTGCATGTGCTGAGATT
CCTAGAGGACAATGGCAAGAATTGATCCCTAACCTTGTACAGTATGTGACAGCAGAGAAT
AGTACCGAGCAAGTCAAGGAAGCTGCTCTTGAAGCTATTGGATACATTTGTGCTGATATG
GAACTGACTCACTTGCTGGTACACGCCAACATAATTCTGACCGCAATCGTTCAAGGGATG
AGGAAGCAAGAGCCAAGCTATCATGTCAAACTTGCAGCAACGAATGCTATGCTCAACTCT
TTAGAGTTTACAAGCGCTAATTTTGAGAAAGAGACCGAGAGACACTTCATCATGCAAGTC
ATTTGCGAAGCCACTCAAATGGACGATGCAAAGGGAGAGATCCGTGTTGCTGCCTTACAA
TGCCTCGTGAAGATAATGTCGCTGTATTATCAATACATGGAGACCTATATGGGGCCTGCA
CTTTTTGCTATTACTGTGGAAGCCATGAAATCCAACGATGACAATGTCTGTCTCCAAGGA
ATTGAATTTTGGTCGAATGTTTGTGACGAAGAGCTTGATTTATCGATCGAAATGGCCGAG
GCAGAAGAGATGGGACGACCGCCAGAAAGGACTAGCAAGTTTTATGCCAAGGGAGCCCTG
CCATATCTCATTCCTATATTAACGAATATACTTGCGCAGCAGGATGAAATGGACGACGAG
GATGACTGGAATCCTTCGAAAGCGGCCGGAGTTTGGTCTATTCTGGAAGGACCATCACCT
GATCAACTGAGTCCAATTTTGGAACAAGGCATGCCAACCTTCATCAAGCTTCTGAAGGAC
GATTGCGTGGTCGTTCGTGACACTACAGCATGGGCTATCGGACGAATCTGTGAGCTGATT
CCAGAGACGGTCATCAATGAGAAATATCTTATGATCTTGCTTGAAGCAATGATTGAGAGT
TTGACTGCTGAGCCGAGAGTCGCTACTAATATTTGTTGGGCGTTTTCATCACTAGCCGAA
GCAGCATACGATGTTGCTTCTGGCAATGGTGGCGAAGAGCCAGAAACCTACATGATGAGC
AAAGTTTATGAGAATATCATACAGAAATTGCTCCTTACAACAGAGCGGAATGACGGCCAC
CAGAACAACTTGCGCAGCTCGGCATACGAGGCTGTCATGGAGATGATCAAGAACAGTCCG
AAAGATTGCTACGACACCGTTCTGAAAACAACAACTCATATCATGCAGAGAATACATGAT
CTTCTTAACATGGAGTCTCTCTTGTGCGCCACCTTGCAGAGTGTCTTACGTAAGGTTAAG
CAGGAACATGTCGCATCCATTGCAGACAATGTCATGGGCTCCCTTCTTCGGATGTTGAGT
TCCGGTTCAGGAGGTGTTCAAGAGGACGCCTTGCTCGCAGTGGGAACACTCATCGAAGTT
GTGGGAGAAAACTTTGTTGCATACATGCCTGCATTTAAAGAATATCTCTTCTCTGGATTG
CGCAATCATGCTGAATATCAGGTGTGCATTGTTGCTGTCGGGGTAGTTGGTGACATCTGC
CGTGCAATCGGCCACAAAATCATGGACCACTGCGACGCCATCATGACCGCTCTTCTCGAG
AACCTGTCAGATGCCAACGTACACCGCAGCGTCAAGCCCCACATACTGTCAGTGTTTGGA
GACATCGCACTGGCTATCGGACCGGACTTCAAGAAATATCTGGAGATTGTGCTTGGGACT
CTGCAACAAGCAGCGCAAGCTCAAGTGGACAAGAGTGACTACGACATGGTGGATTATTTC
AATGAGCTCCGAGAAGGCTGTTTGGAGACATATACGGGCATCATTCAGGGTCTTAAAGGA
GATAAAAAAGAGCTGAGTGCGGATGTCTTCTTGCTCAAAGATCACATTCATTTCATGCTT
CTCTTTGTCGAATCCATCGCCATGGACGAAGACCGTAGCGAAGGAGTCGTAGCTGCGGCA
GCTGGGCTTATTGGTGATCTTTGTACCGCCTTTGGACAAACGTACGGTCCCACTTTGTTG
GGGTACCTGGATGCCAAGCCGAAGATTAGCGACCTTCTGACGGAAGGCAGACGATCAAAG
ACAAGCAAGACGAAGAGTTTGGCGTTGTTTTTGCGATGTTGCCTGAACTTGAGTTCCTTT
TGGCATCTTCCTCCTATCCTGCAATCTCCTGACTGACTGTTCCTGGATGAAGGATGTAAA
TCTTTGCCCATCTGTTTCCCGTAGCCTGAGAGTGCTCTTGCTGTTGTTGCCCTCTTGAGT
GATGATGATGTGA
| Gene3D |
ARM-like (IPR011989) - T[1-353] 9.9E-134 - T[354-820] 4.1E-185 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[4-811] 9.69E-147 |
| Pfam |
Importin-beta_N (IPR001494) - T[22-102] 1.8E-9 |
| ProSiteProfiles |
Importin-beta_N (IPR001494) - T[22-102] 19.979 |
| SMART |
Importin-beta_N (IPR001494) - T[22-102] 1.3E-8 |
| SMART |
Armadillo (IPR000225) - T[119-160] 180.0 - T[361-400] 0.023 - T[542-581] 190.0 |
| ProSiteProfiles |
HEAT_type_2 (IPR021133) - T[372-410] 9.281 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IMB1_HUMAN | 62.673 % | 1063 | 0 |