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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R22....' > 
  2. Transcript 'KH2012:KH.S966.3.v2....' > 
  3. Clone 'AHC0AAA177YJ09' > 
  4. Transcript 'KH2012:KH.S753.2.v1....' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1064.g11062.01.t

Possible name(s)

Harore.CG.MTP2014.S1064.g11062

Gene model

Harore.CG.MTP2014.S1064.g11062

Location

S1064 [0 / 3,062]

Sequences

Amino acid sequence

Length: 574

>Harore.CG.MTP2014.S1064.g11062.01.p
IIMADLYEKVNLQVYRNVESTLCMLEESKKFDLENKISILMNESKFQEALKLLEQLQPIQ
NDKAKKINTQLMISQCQMKLAVPHSSAKDLEKLITSSPVLSEDLKESANKNVKQKIYVRA
FLYYFLASKFYKGKYLGDDAVQGIKACVQAVEMFVEEMIKQDDGKKIVAGYVIPTLKEVT
DDLSKIPNADPRYQVTLQAWCLQSIGLCYKHCEDYQQFANNVESAIQLLQRELKEDVDKY
RVYGICLHRSGEAHEKLDEKGQAMDLYESAIKAKNNANDWPSVQSKFDSNELSQEKLKIM
VEFYEAKLDVLKNVMKRFEYSEALNLIREIEPLLRRVEEKIKVQLTKIEYHMMMEQHCKV
FREMDELTRLTLSSKRTAGDVMKMAENDITAELYISGFLRYFSACKLYKERSAGNGIRAC
MLAVRQFVKKMIEQDEKMKKIVTDYIIPALEEVTDDVRTILNSNREVQVELQAWCLYIVG
FCYGYCKKFERHAEFTESAIELMKKQLKDDAEKYSIIGYCYHSTGVAYSSLNQKEKSKEM
YRKAVDVYNKATDWLNEEKKRDAIMLTKKNLKFL

Nucleotide sequence

Length: 1,727

>Harore.CG.MTP2014.S1064.g11062.01.t
GTATTATCATGGCTGATTTGTATGAAAAAGTCAACTTGCAAGTCTATAGAAACGTCGAGT
CGACTCTCTGCATGCTGGAAGAATCGAAGAAATTCGACCTCGAAAACAAAATATCGATAC
TCATGAATGAATCCAAGTTCCAGGAAGCTCTCAAACTTCTTGAACAACTTCAACCAATCC
AAAATGATAAAGCAAAGAAGATAAACACCCAACTCATGATATCACAATGTCAGATGAAAT
TGGCAGTGCCACACAGTAGTGCTAAAGATCTGGAAAAGCTGATTACATCATCACCGGTGC
TATCAGAGGACTTGAAGGAATCTGCAAATAAAAACGTCAAACAAAAGATATATGTTCGAG
CATTTCTTTACTATTTCTTGGCAAGTAAATTTTACAAAGGAAAATATCTTGGTGATGATG
CAGTGCAAGGTATCAAGGCATGTGTGCAAGCTGTTGAGATGTTTGTAGAAGAAATGATCA
AACAGGATGATGGGAAGAAGATTGTCGCTGGTTACGTCATCCCAACACTGAAGGAAGTCA
CTGATGATCTGAGCAAAATCCCAAATGCAGATCCAAGATATCAAGTCACACTGCAAGCAT
GGTGTTTACAAAGCATTGGATTATGCTACAAACATTGCGAAGATTATCAACAATTTGCCA
ACAATGTAGAATCAGCCATCCAGCTCTTGCAGAGAGAATTAAAAGAAGATGTCGATAAAT
ATCGGGTGTATGGAATTTGTCTTCATAGATCTGGTGAAGCTCATGAGAAATTGGATGAAA
AGGGGCAAGCAATGGATCTGTATGAAAGCGCTATCAAGGCAAAGAACAATGCAAATGACT
GGCCTAGTGTTCAGAGTAAATTTGATAGTAATGAGCTGTCGCAGGAAAAGCTGAAAATCA
TGGTGGAATTTTATGAAGCCAAGTTAGATGTTTTGAAGAATGTAATGAAGAGATTCGAAT
ACTCAGAAGCTCTTAACCTTATTCGTGAAATCGAACCATTGCTTAGAAGGGTGGAAGAAA
AAATAAAAGTTCAGCTAACAAAGATTGAATATCACATGATGATGGAGCAACATTGTAAGG
TTTTTAGAGAGATGGATGAGCTTACTCGATTGACACTTTCGTCGAAGAGAACAGCCGGTG
ATGTCATGAAAATGGCAGAAAATGACATCACAGCGGAGCTGTACATAAGTGGCTTTCTCC
GTTACTTCTCTGCATGCAAATTATACAAAGAGAGATCGGCAGGGAATGGTATCAGAGCAT
GCATGCTAGCCGTGCGACAGTTTGTGAAGAAAATGATTGAGCAAGATGAAAAGATGAAAA
AGATTGTCACTGATTATATCATCCCAGCACTTGAGGAAGTCACCGATGATGTGAGAACAA
TTCTAAATTCGAATCGGGAAGTTCAAGTTGAGCTGCAGGCTTGGTGTTTGTATATCGTTG
GGTTTTGTTACGGCTACTGCAAAAAGTTTGAACGACATGCCGAGTTTACTGAATCTGCGA
TTGAACTGATGAAGAAACAATTGAAGGATGATGCAGAGAAGTATTCCATCATTGGATATT
GCTACCACAGTACTGGTGTTGCTTACTCAAGCTTGAATCAAAAAGAGAAATCGAAAGAAA
TGTACAGGAAAGCAGTGGATGTTTACAACAAGGCGACTGACTGGCTTAACGAGGAGAAAA
AGAGGGACGCTATTATGTTAACGAAAAAAAATCTGAAATTTCTCTGA

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[199-281] 4.56E-12 - T[471-568] 4.56E-12
SMART
TPR_repeat (IPR019734) - T[199-232] 240.0 - T[244-277] 28.0 - T[473-506] 380.0 - T[518-551] 21.0
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[451-573] 1.2E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value