- Transcript 'Boleac.CG.SB_v3.S198...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Molecular Tool 'Cirobu.Tbx6-r.b>Moocci.Lhx3/4.b' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1070.g03113.01.t
Possible name(s)
RDH12; RDH13
Gene model
Location
S1070 [2,421 / 3,408]
Amino acid sequence
Length: 328
>Harore.CG.MTP2014.S1070.g03113.01.p
MSEKPVETVIRGWVNPEIKIPGKTVVITGANTGIGLATAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKKLDLSSFESVREFAADINATESRLDVLINNAGVFLCPQSKTE
DEFETHFGINHLGPFLLTNLLLDLLKKSTPSRIVTVASIAHNKWAGGVIQWDDLNHNNNV
YNPYTCYSQSKLCNVLFSRELSKRLQGTGVTSNSLQPGTVRTDAFRHMNTYELQSFVERF
TSFLIRITKWLYKTPEKGAQTSIYLAVAPELAEDSGKYYSDCKQTEESSDAKNDDFAERL
WQISEKFVELKTGSEKGEAEEKKSGGAK
Nucleotide sequence
Length: 987
>Harore.CG.MTP2014.S1070.g03113.01.t
ATGTCTGAAAAACCTGTGGAAACAGTCATCAGAGGTTGGGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGGTCATAACAGGAGCTAATACTGGAATTGGTTTAGCAACTGCTGTG
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCCGAGAATGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCCGTTCGAGAATTTGCCGCTGACATCAATGCTACCGAATCT
CGACTGGATGTTCTCATTAATAACGCAGGGGTTTTCCTGTGCCCTCAATCTAAGACCGAG
GATGAGTTCGAGACACATTTTGGGATCAATCATCTGGGGCCTTTTCTGTTGACGAATTTG
TTGTTGGATTTATTGAAGAAAAGCACACCAAGTCGAATTGTGACTGTGGCTTCGATTGCT
CATAATAAATGGGCTGGCGGTGTGATTCAATGGGACGATTTAAACCACAATAATAATGTT
TACAATCCGTATACGTGTTATTCACAAAGCAAACTGTGCAATGTTTTGTTCTCGAGAGAA
CTGAGTAAAAGATTGCAAGGCACCGGTGTCACTTCCAACAGTTTGCAACCAGGCACTGTA
CGGACCGACGCTTTCAGACATATGAATACCTATGAATTACAATCATTTGTGGAAAGGTTT
ACATCTTTCCTGATAAGGATTACAAAATGGTTGTATAAGACCCCAGAAAAGGGGGCTCAA
ACCTCCATTTACTTGGCAGTTGCCCCGGAGCTTGCAGAAGACAGTGGAAAGTATTATTCC
GACTGCAAACAGACTGAAGAGTCGAGCGATGCGAAGAATGATGATTTTGCCGAGAGATTG
TGGCAAATCAGTGAAAAATTTGTTGAATTGAAGACGGGAAGTGAGAAAGGAGAAGCAGAA
GAGAAAAAATCAGGAGGAGCCAAGTGA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[21-285] 3.21E-59 |
| Pfam |
SDR_fam (IPR002347) - T[23-161] 4.3E-28 |
| PRINTS |
SDR_fam (IPR002347) - T[24-41] 1.8E-18 - T[100-111] 1.8E-18 - T[100-111] 3.3E-6 - T[145-161] 1.8E-18 - T[151-159] 3.3E-6 - T[187-206] 1.8E-18 - T[187-206] 3.3E-6 - T[208-225] 1.8E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH13_HUMAN | 51.351 % | 267 | 4.16E-88 |
| RDH14_HUMAN | 48.185 % | 249 | 2.52E-81 |
| RDH12_HUMAN | 48.667 % | 256 | 3.03E-84 |