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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.76.v2.A...'
  2. Transcript 'KH2012:KH.L3.1.v1.A....'
  3. Transcript 'KH2012:KH.S522.8.v1....'
  4. Transcript 'Moocci.CG.ELv1_2.S24...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1070.g03113.01.t

Possible name(s)

RDH12; RDH13

Location

S1070 [2,421 / 3,408]

Sequences

Amino acid sequence

Length: 328

>Harore.CG.MTP2014.S1070.g03113.01.p
MSEKPVETVIRGWVNPEIKIPGKTVVITGANTGIGLATAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKKLDLSSFESVREFAADINATESRLDVLINNAGVFLCPQSKTE
DEFETHFGINHLGPFLLTNLLLDLLKKSTPSRIVTVASIAHNKWAGGVIQWDDLNHNNNV
YNPYTCYSQSKLCNVLFSRELSKRLQGTGVTSNSLQPGTVRTDAFRHMNTYELQSFVERF
TSFLIRITKWLYKTPEKGAQTSIYLAVAPELAEDSGKYYSDCKQTEESSDAKNDDFAERL
WQISEKFVELKTGSEKGEAEEKKSGGAK

Nucleotide sequence

Length: 987

>Harore.CG.MTP2014.S1070.g03113.01.t
ATGTCTGAAAAACCTGTGGAAACAGTCATCAGAGGTTGGGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGGTCATAACAGGAGCTAATACTGGAATTGGTTTAGCAACTGCTGTG
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCCGAGAATGTTGTTTTGAAGAAACTC
GATCTCTCGTCGTTTGAATCCGTTCGAGAATTTGCCGCTGACATCAATGCTACCGAATCT
CGACTGGATGTTCTCATTAATAACGCAGGGGTTTTCCTGTGCCCTCAATCTAAGACCGAG
GATGAGTTCGAGACACATTTTGGGATCAATCATCTGGGGCCTTTTCTGTTGACGAATTTG
TTGTTGGATTTATTGAAGAAAAGCACACCAAGTCGAATTGTGACTGTGGCTTCGATTGCT
CATAATAAATGGGCTGGCGGTGTGATTCAATGGGACGATTTAAACCACAATAATAATGTT
TACAATCCGTATACGTGTTATTCACAAAGCAAACTGTGCAATGTTTTGTTCTCGAGAGAA
CTGAGTAAAAGATTGCAAGGCACCGGTGTCACTTCCAACAGTTTGCAACCAGGCACTGTA
CGGACCGACGCTTTCAGACATATGAATACCTATGAATTACAATCATTTGTGGAAAGGTTT
ACATCTTTCCTGATAAGGATTACAAAATGGTTGTATAAGACCCCAGAAAAGGGGGCTCAA
ACCTCCATTTACTTGGCAGTTGCCCCGGAGCTTGCAGAAGACAGTGGAAAGTATTATTCC
GACTGCAAACAGACTGAAGAGTCGAGCGATGCGAAGAATGATGATTTTGCCGAGAGATTG
TGGCAAATCAGTGAAAAATTTGTTGAATTGAAGACGGGAAGTGAGAAAGGAGAAGCAGAA
GAGAAAAAATCAGGAGGAGCCAAGTGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-285] 3.21E-59
Pfam
SDR_fam (IPR002347) - T[23-161] 4.3E-28
PRINTS
SDR_fam (IPR002347) - T[24-41] 1.8E-18 - T[100-111] 1.8E-18 - T[100-111] 3.3E-6 - T[145-161] 1.8E-18 - T[151-159] 3.3E-6 - T[187-206] 1.8E-18 - T[187-206] 3.3E-6 - T[208-225] 1.8E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 51.351 % 267 4.16E-88
RDH14_HUMAN 48.185 % 249 2.52E-81
RDH12_HUMAN 48.667 % 256 3.03E-84