Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1070.g11701.01.t

Possible name(s)

RDH13

Gene model

Harore.CG.MTP2014.S1070.g11701

Location

S1070 [0 / 854]

Sequences

Amino acid sequence

Length: 283

>Harore.CG.MTP2014.S1070.g11701.01.p
DINATESSLDILINNAGVMMCPPSETKDGFELQFGTNHLGHFLMTNLLLDLVKKSAPARI
IHVSSTAHYGWFGAAIHWDDLNFTKNYDSIKAYGQSKLCNVLFSRELSKKLQGTGVTSNS
LEPGAVKTDLQRHVGTHDRPSFKDRLMSLFTYFTRWAWSTPEKGAQTSIYLAVAPELAED
SGKYYADCKLKEESADAKKDDFAERLWKISEELTGLKPRSEGEEVKQSEEPQKTPEQEEE
TQKTPEQEEETQKTPEQVEEPQKDPEQSEEQQKDPEQSEQKET

Nucleotide sequence

Length: 854

>Harore.CG.MTP2014.S1070.g11701.01.t
CTGACATCAATGCTACCGAATCATCACTGGATATTCTCATTAATAACGCAGGGGTGATGA
TGTGCCCTCCGTCCGAGACCAAGGATGGGTTCGAGCTGCAGTTTGGGACAAATCATCTGG
GTCATTTTTTGATGACGAATCTGTTGCTGGATTTGGTGAAGAAGAGTGCACCTGCCCGCA
TTATACATGTATCATCTACTGCTCATTACGGATGGTTTGGAGCTGCGATTCATTGGGATG
ATTTGAATTTTACTAAGAATTATGATTCTATCAAGGCTTATGGTCAAAGCAAGCTATGTA
ATGTACTTTTCTCTAGAGAGCTAAGCAAGAAGCTGCAAGGTACTGGTGTTACATCAAATA
GTTTGGAACCTGGAGCTGTTAAGACGGATTTACAGAGGCATGTTGGAACACATGACAGGC
CTTCGTTCAAGGACCGGTTGATGTCTTTATTCACTTATTTCACAAGATGGGCGTGGAGCA
CCCCAGAAAAGGGGGCTCAAACCTCCATTTACTTGGCAGTTGCCCCAGAACTTGCAGAAG
ACAGTGGAAAGTATTACGCAGACTGCAAACTAAAAGAAGAGTCTGCCGATGCGAAGAAAG
ATGATTTTGCAGAGAGATTGTGGAAAATCAGCGAAGAGCTTACCGGGCTGAAACCGAGAA
GTGAGGGAGAAGAAGTGAAGCAGAGTGAGGAGCCGCAGAAAACTCCCGAGCAGGAAGAGG
AGACGCAGAAAACTCCCGAGCAGGAAGAGGAGACGCAGAAAACTCCTGAGCAGGTAGAGG
AGCCGCAGAAAGATCCTGAGCAGAGTGAGGAGCAGCAGAAAGATCCTGAGCAGAGTGAAC
AAAAAGAAACTTAG

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[4-190] 8.2E-33
PRINTS	SDR_fam (IPR002347) - T[7-18] 8.8E-6 - T[7-18] 1.7E-11 - T[52-68] 1.7E-11 - T[58-66] 8.8E-6 - T[93-112] 8.8E-6 - T[93-112] 1.7E-11 - T[114-131] 1.7E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	46.479 %	182	4.04E-56
RDH13_HUMAN	50.909 %	189	1.88E-58
RDH14_HUMAN	50.235 %	187	9.8E-58