- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S107.g03991.01.t
Possible name(s)
TAF6; TAF6L
Gene model
Location
S107 [213,693 / 216,102]
Amino acid sequence
Length: 579
>Harore.CG.MTP2014.S107.g03991.01.p
MAEEKRYAVLSSVSILQCANATGITDLPADVASALAEDASYRVREIINKSSQFMKHARRI
RLSATDVMKALHFNHVTSTIGENHAEDPHYDTLNEGDFHILEDDPVNLHDIALDNYKGRE
MIQPTFSSSWYIVNGSLYTGNASDENVTVSDTLLEYFNTSVTCILGSDKALRQETLKDLC
VNPKIFPLIPYFVTFISNVKAVSHDLQKLSVLLQTVSALTLNPYMNFMGFLKPLVSSVLY
CVLEPLAASINLTNDHWLLRDYGARLLAFIADRHSHTHTKDIVKYIRESVKNILSDPTRP
LCSHYGSIVTITALGIPAIRTMLCPNLLSYYDLCLRSLLEEDTDCNNVHLKSDIHKVVGV
IIDALEKMYFEVFENGLQNSDYTLLTQLFSLFGDSLFARLPLLVPNMLSSSQTRHDYASK
TKDQSRKTKPLQKNYNSPSTLQYYGPIIKKPLFLSTRRLKSINLSEMFRPTRIQQRKLNI
GSMGNLTLSRQKVLNAPYSHSPYFRSVIKTAFIGTRSEEVLTTTYNHNLATISYHVTRIH
YHKVYGKNLSIKSDIIQAEVNISLDYNQCPIQSKSINTN
Nucleotide sequence
Length: 1,740
>Harore.CG.MTP2014.S107.g03991.01.t
ATGGCAGAAGAGAAGCGATATGCTGTGCTCTCTTCAGTCTCTATACTGCAATGTGCCAAT
GCAACTGGTATAACTGATCTTCCTGCCGATGTTGCCTCAGCATTAGCAGAGGATGCTAGC
TATCGTGTGCGTGAAATTATCAATAAATCCTCGCAGTTCATGAAACATGCAAGAAGGATA
CGTTTGAGTGCAACTGACGTCATGAAAGCCTTACATTTCAACCATGTAACTTCAACCATC
GGAGAAAACCATGCTGAGGATCCACACTATGATACTCTTAACGAGGGAGACTTTCATATT
TTGGAAGATGATCCTGTTAACCTTCATGACATAGCATTGGATAATTACAAGGGAAGAGAA
ATGATACAGCCTACCTTTTCATCATCGTGGTATATCGTCAATGGAAGTCTATACACAGGC
AATGCCTCGGATGAGAATGTGACTGTCTCTGATACATTGCTGGAATATTTTAACACGTCA
GTGACATGTATTCTAGGGAGTGATAAAGCCTTGAGACAAGAAACTTTAAAAGATTTGTGT
GTAAATCCTAAAATTTTTCCCTTGATTCCGTACTTTGTTACGTTCATATCCAATGTTAAA
GCTGTGAGTCATGATTTGCAAAAGTTGTCTGTTCTTTTGCAAACAGTTTCAGCCCTGACT
CTGAATCCTTATATGAATTTCATGGGATTCTTGAAACCATTGGTTTCGTCTGTACTTTAC
TGTGTTCTAGAACCGCTAGCTGCTTCCATCAATCTAACTAATGACCACTGGCTTCTCCGC
GACTATGGCGCTCGGCTGTTAGCTTTCATTGCGGATAGACACAGTCACACACATACTAAA
GACATTGTAAAATACATACGCGAATCTGTCAAGAACATATTGTCAGATCCCACCAGACCA
CTCTGCTCCCACTATGGCTCTATAGTCACCATAACTGCTTTGGGCATACCTGCCATCCGA
ACCATGCTATGTCCAAACCTATTATCTTATTACGATTTGTGCCTCCGTTCATTATTGGAA
GAAGACACCGACTGCAACAATGTGCATTTGAAAAGTGATATTCACAAGGTGGTTGGAGTT
ATCATTGACGCTTTAGAAAAAATGTACTTTGAAGTGTTTGAAAATGGACTACAAAATTCC
GATTACACCCTGCTGACACAGCTGTTTTCTTTATTCGGTGACTCTCTCTTTGCTAGATTG
CCACTGCTTGTTCCAAACATGCTTTCAAGTTCACAAACCCGCCATGATTACGCCTCAAAA
ACAAAAGATCAAAGTAGGAAAACAAAACCTTTGCAAAAAAATTATAACAGTCCATCTACA
TTGCAGTATTATGGACCGATTATCAAAAAACCTTTGTTTTTGTCAACGCGACGTTTGAAA
TCCATAAACCTGTCGGAGATGTTTAGGCCGACAAGAATACAGCAAAGGAAACTGAACATA
GGCAGTATGGGAAATCTTACATTGTCAAGGCAGAAGGTACTGAATGCACCTTACTCTCAT
TCTCCATATTTCCGTTCAGTTATAAAGACAGCCTTTATTGGGACACGTTCCGAGGAAGTG
TTGACAACAACCTACAATCATAATTTAGCCACCATTTCATACCATGTGACACGAATACAT
TACCACAAGGTATACGGTAAAAATCTTTCGATAAAATCCGACATAATTCAGGCAGAAGTC
AACATTAGTTTAGATTACAATCAATGCCCCATACAATCCAAATCTATAAACACGAACTAG
| PANTHER |
TAF6 (IPR037796) - T[1-400] 1.6E-88 |
| Gene3D |
Histone-fold (IPR009072) - T[7-72] 4.5E-18 |
| SMART |
TAF_TATA-bd (IPR004823) - T[8-72] 4.9E-14 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[9-71] 1.16E-8 |
| Pfam |
TAF_TATA-bd (IPR004823) - T[10-71] 7.3E-17 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[182-413] 4.46E-6 |
| Pfam |
TAF6_C (IPR011442) - T[238-327] 4.1E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAF6_HUMAN | 30.319 % | 87.4 | 5.93E-18 |
| TAF6L_HUMAN | 39.566 % | 243 | 2.8E-72 |