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  1. Transcript 'KH2012:KH.C1.940.v2....' > 
  2. Transcript 'KH2012:KH.C5.25.v1.A...' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g48187.01.t

Possible name(s)

CASZ1; MTF1

Gene model

Boschl.CG.Botznik2013.chrUn.g48187

Location

chrUn [299,413,471 / 299,423,144]

Sequences

Amino acid sequence

Length: 666

>Boschl.CG.Botznik2013.chrUn.g48187.01.p
MSKCETSDLENIAKYFLRCPTMKCLFPACEYFTREHYHCMVDGCFATFPSEKNVRKHSRV
ESFSIHHRLKSEFKSSSKGSNAKTRVRFQVIAFTVPFHLNLELTGVSQPLLKGPSTPLSI
SPDQPARTSMLSVSSAPSRNTTPPAVAEPAQDRGANGHSDAEMSKSSREEDARLSGTVVS
MQGPGPSQLLSAGLLQAMIKSPQSRHPLFSTPSLRNWDFLTNVATSSPITNMSPREYSMD
SIGRQRGNAGVGYMHFTADMPCIGADCKYAGQVHWHCTINRCRYVCKSLAKAQNHRTAHD
TSEAYSRSAKDCFRSYTLKHPCPNPNCEFRLRGHYHCLKPGCTFVTIGTSKLPWHMKKHE
KIANREANGFKYYTKKEHCRHIECKYAAKFSHYHCVRDGCSSAFQYIHQMSTHIRKHNRK
SAGRSWVSAGELERDERAESGDDATPLVIDEEALGAGNFKQEAPNNSGLTPREIQNAISH
YQNVVDQSRGDITLNHDGKALDFSTIIAMSQQAEGIASQIKREQDNSDVTMDEVSDDQSQ
AARYMNNELSGAEISPMMASGIGQFSKFKLDDATLDGFQKFETNQDCGDQACVHRHKVAH
FHCTKDNCNYHFTGRSHMYKHYQHHERVAGLVRDDFKRFKATQPCDDARCTLNGNSTHFH
CLRCEF

Nucleotide sequence

Length: 2,000

>Boschl.CG.Botznik2013.chrUn.g48187.01.t
AATGTCGAAGTGCGAGACGTCGGACTTGGAAAACATCGCCAAATACTTCCTCAGGTGTCC
GACCATGAAGTGCTTGTTTCCGGCGTGCGAGTATTTCACGCGAGAGCATTACCACTGTAT
GGTGGACGGGTGTTTCGCTACGTTCCCGTCGGAGAAGAACGTCAGAAAGCATTCGAGAGT
CGAGTCATTTTCAATTCACCACCGACTCAAGTCAGAGTTCAAGTCGTCTAGTAAAGGGTC
GAATGCTAAGACTCGAGTCCGGTTCCAAGTTATAGCGTTTACTGTTCGGTTTCATCTCAA
CCTCGAGCTGACCGGGGTGTCCCAACCACTGCTGAAAGGCCCGTCCACACCGCTCTCGAT
TTCACCCGACCAGCCGGCCCGGACCTCGATGCTGAGCGTGTCGTCCGCCCCAAGCAGAAA
CACGACCCCACCCGCCGTGGCAGAACCGGCCCAGGACAGGGGTGCCAATGGACACAGCGA
CGCGGAGATGTCCAAAAGTAGCCGCGAGGAAGACGCGAGGCTGTCCGGGACAGTGGTGTC
GATGCAGGGTCCTGGTCCTAGCCAGCTTCTCAGCGCAGGGCTGCTGCAGGCTATGATCAA
GTCGCCACAGTCCAGGCATCCGCTGTTCTCCACCCCGAGCCTGAGGAACTGGGACTTTTT
GACAAACGTCGCGACCTCGAGCCCGATTACGAACATGTCCCCCCGAGAATATAGCATGGA
CTCTATCGGCCGTCAACGCGGGAACGCTGGTGTCGGCTACATGCATTTCACCGCTGGCAT
GCCTTGTATCGGAGCCGATTGCAAATACGCGGGCCAGGTCCATTGGCACTGTACCATCAA
CCGTTGCCGTTACGTGTGCAAGTCTCTGGCCAAAGCCCAGAACCACAGGACGGCCCACGA
CACGTCGGAGGCGTACTCGCGCTCGGCCAAAGACTGCTTCCGAAGCTACACGCTCAAGCA
CCCATGCCCAAACCCGAATTGTGAGTTTCGGCTTCGCGGACACTATCACTGCCTGAAGCC
CGGTTGCACCTTCGTCACCATCGGCACGTCGAAACTGCCGTGGCACATGAAGAAACACGA
AAAGATCGCAAACAGAGAGGCCAACGGTTTCAAATACTACACCAAGAAGGAGCATTGTCG
ACACATAGAATGCAAGTACGCCGCGAAATTCAGTCATTACCATTGCGTGCGCGACGGCTG
CTCGTCTGCGTTCCAATACATACATCAGATGTCGACGCACATCCGCAAGCACAACAGAAA
GTCTGCGGGCAGGAGCTGGGTGTCTGCAGGAGAATTGGAACGAGACGAACGCGCCGAGTC
TGGAGACGACGCAACCCCATTGGTTATCGACGAGGAAGCTCTTGGGGCCGGTAATTTCAA
ACAGGAGGCTCCAAACAACAGCGGCCTGACGCCGAGGGAAATTCAAAACGCGATCAGCCA
TTACCAGAACGTTGTGGACCAGAGCCGCGGCGATATCACTTTGAATGACGATGGAAAGGC
CTTGGACTTCAGCACGATTATCGCCATGTCTCAACAAGCAGAGGGCATCGCCAGTCAAAT
CAAAGGCGAGCAAGACAACAGTGACGTCACTATGGACGAAGTCTCAGACGACCAATCGCA
GGCCGCGAGATACATGAATAACGAATGGTCCGGCGCTGAGATATCGCCCATGATGGCGTC
TGGGATCGGACAGTTTTCCAAGTTTAAATTAGACGACGCGACGCTGGATGGCTTTCAAAA
GTTTGAGACGAATCAGGATTGCGGGGACCAGGCATGCGTGCATCGACACAAGGTTGCCCA
CTTCCACTGTACCAAGGACAACTGTAACTATCACTTCACCGGTCGGTCCCACATGTACAA
GCATTACCAGCATCACGAGCGGGTGGCGGGCCTCGTCAGGGACGATTTTAAGAGGTTTAA
AGCCACGCAACCGTGCGACGATGCGCGGTGTACGCTGAACGGGAACAGCACGCATTTTCA
TTGCTTGAGATGCGAATTCA

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[37-66] 9.9 - T[275-299] 16.0 - T[335-359] 3.4 - T[393-417] 5.2 - T[601-625] 5.0
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[393-422] 8.933 - T[601-625] 8.891
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[395-417] . - T[603-625] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CASZ1_HUMAN 36.747 % 310 2.5E-91