- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g09790.01.t
Possible name(s)
ALOX12B; ALOX5
Gene model
Location
S10 [436,541 / 441,143]
Amino acid sequence
Length: 743
>Harore.CG.MTP2014.S10.g09790.01.p
MDWNIASRVLYKAQSDRDLEVNTTSPLYYSTVKKLYGPKFLCRIATMLGNLKSLSSSAKQ
CLKVPHHCSSDKAGKITYSIAITTGSMKFAGTDANISIRITGAGGDRTSRAKLDNAFRDD
FERGCTDKFRVKLEDIGEPTLVALEIDHSGLFSDWYACLIVLQKSGSKEIYTFPVYSWVE
GTVVVPNGEAKLPQNEENPMLISFRKNELSSKRRLYKWRGRDDAAAKGLPGYISAISHDA
LPKNIQFPDGLYRDFEESKGIAFVHGFQDKLHAISTEIIDKWDSLEEFTHFMSHPKIPNM
PDYQKDWLNDCEFGRQMLNGCNPCMISQCKEIPKNFPVTDDMVKKLLKRPLTEELKAGKL
FLIDCKVAKDIEIPICSCVPLCLLYDADSKLKPIAIQLQQEPDSKNPIWTPNDSEYDWML
AKMHFRSAESNIHQIVYRILYTHLVLEPFAVAMLRCLSSRHPLHKLLHPHLQYVCAANTV
IRTSLLSPGGVFDKLLAYGGGNQFPVLRAAFRTYNVNIMNTVKLMKKQGTDSLKAYYYKD
DGIPLFKSIGKFVEKIIMLFYSCDDDVKNDRELQHFIKEVHDEGFAWEEGKHRGCPTHFG
TRAEVVDVLSGVIFTATCQHAATNSGQLDTYMYVPNSPLQMSKPPLTAKGKATLQTVVSS
LPDKRASITQVDIAHSFSKYSEEEVYLGNFPSRLFCDEESQKIISIFQKELQEISKKIKE
RNSQLKIPYEYLMPEKIPNGLTV
Nucleotide sequence
Length: 2,232
>Harore.CG.MTP2014.S10.g09790.01.t
ATGGACTGGAACATAGCATCTCGGGTACTTTACAAAGCACAGTCGGACAGAGATCTCGAA
GTAAACACTACTAGCCCGCTTTACTACTCTACTGTAAAAAAACTGTACGGACCAAAGTTT
CTTTGCAGAATTGCCACCATGCTTGGAAATCTGAAATCCCTCTCCAGCTCTGCAAAGCAA
TGCCTGAAAGTGCCCCATCACTGCAGTTCTGACAAGGCCGGAAAAATTACTTACAGCATT
GCTATTACGACTGGTTCAATGAAATTTGCTGGAACCGATGCAAACATCTCCATTCGCATC
ACGGGTGCTGGGGGCGATCGAACGTCACGTGCCAAGCTTGATAACGCTTTTCGGGATGAC
TTTGAACGAGGATGCACTGACAAGTTTCGCGTAAAGCTTGAGGACATAGGAGAACCTACT
CTTGTTGCTCTTGAAATTGACCATTCTGGACTTTTTTCCGACTGGTACGCCTGCTTGATT
GTTTTGCAAAAATCTGGGTCAAAAGAAATATACACTTTCCCCGTATACTCGTGGGTTGAA
GGAACAGTTGTAGTGCCAAACGGTGAAGCAAAACTACCACAAAACGAAGAAAATCCAATG
CTCATATCGTTTCGTAAAAACGAATTGTCATCAAAAAGACGTTTGTATAAATGGAGAGGC
CGGGACGATGCTGCTGCCAAAGGGTTGCCAGGTTATATATCTGCTATTTCTCACGACGCC
CTGCCTAAAAATATTCAGTTCCCTGATGGTCTTTATCGAGACTTTGAGGAATCAAAGGGA
ATTGCTTTCGTCCACGGATTTCAAGATAAGCTACATGCTATATCTACAGAAATCATAGAT
AAATGGGATTCCCTGGAAGAATTTACTCATTTCATGTCGCACCCGAAAATCCCTAACATG
CCAGACTACCAGAAGGATTGGCTCAATGACTGTGAGTTTGGAAGACAGATGCTGAACGGC
TGCAACCCGTGTATGATAAGTCAGTGTAAAGAGATTCCAAAAAACTTTCCAGTGACAGAT
GATATGGTTAAAAAGCTTCTTAAACGCCCTCTTACTGAAGAGCTGAAGGCTGGAAAATTG
TTTCTCATCGACTGTAAAGTGGCAAAAGATATCGAGATTCCTATCTGCAGCTGTGTACCG
CTTTGTCTCTTATATGACGCCGATAGTAAACTCAAACCCATTGCCATTCAGTTGCAGCAG
GAACCGGACAGTAAAAATCCGATTTGGACACCAAACGATTCCGAATACGATTGGATGCTC
GCAAAGATGCATTTTCGTAGCGCTGAAAGCAACATTCATCAGATTGTATATCGCATTCTC
TATACTCATTTGGTTCTTGAACCCTTCGCCGTGGCGATGTTGCGCTGCTTGTCATCGAGA
CATCCTTTGCATAAACTGCTCCACCCTCATTTGCAGTACGTTTGTGCCGCCAATACCGTA
ATACGTACTTCCCTCCTTTCGCCGGGTGGAGTTTTTGACAAGCTGCTCGCTTACGGAGGA
GGAAATCAATTTCCAGTTCTTCGAGCCGCCTTCCGGACTTACAACGTCAACATTATGAAC
ACCGTGAAGCTGATGAAGAAGCAGGGAACTGATTCGCTGAAGGCATATTATTACAAAGAC
GACGGAATTCCTCTTTTCAAGTCGATCGGGAAATTTGTTGAGAAAATCATAATGCTTTTC
TACAGCTGTGATGACGATGTCAAAAACGATAGAGAATTACAGCACTTCATAAAGGAGGTA
CACGATGAAGGCTTTGCATGGGAGGAAGGAAAACACAGAGGTTGTCCAACGCATTTCGGC
ACCAGAGCAGAGGTTGTAGACGTTTTGTCCGGCGTCATTTTCACAGCAACGTGTCAACAT
GCCGCTACCAATTCTGGACAACTAGATACCTATATGTACGTCCCAAATTCTCCACTGCAA
ATGAGCAAACCACCTCTCACTGCTAAGGGAAAGGCTACTTTGCAAACAGTGGTTTCAAGC
TTACCAGACAAAAGAGCAAGTATCACACAAGTGGATATTGCACATTCGTTTTCAAAGTAT
TCAGAAGAAGAGGTGTATCTCGGAAATTTTCCCAGCCGACTATTTTGCGATGAAGAGTCT
CAGAAAATCATTTCGATCTTCCAGAAAGAATTGCAGGAAATTTCGAAAAAGATCAAGGAA
CGAAATTCGCAATTGAAGATACCTTACGAGTACTTGATGCCAGAAAAAATTCCAAATGGC
TTAACCGTTTGA
| Gene3D |
Catalase_core_sf (IPR037060) - T[45-188] 9.5E-30 |
| PANTHER |
LipOase (IPR000907) - T[60-743] 1.2E-176 |
| SUPERFAMILY |
PLAT/LH2_dom_sf (IPR036392) - T[74-181] 8.02E-24 |
| SMART |
PLAT/LH2_dom (IPR001024) - T[76-187] 1.3E-14 |
| ProSiteProfiles |
PLAT/LH2_dom (IPR001024) - T[76-193] 29.59 |
| Pfam |
PLAT/LH2_dom (IPR001024) - T[78-181] 1.3E-17 |
| ProSiteProfiles |
LipOase_C (IPR013819) - T[191-743] 120.674 |
| SUPERFAMILY |
LipOase_C_sf (IPR036226) - T[193-742] 1.96E-135 |
| Pfam |
LipOase_C (IPR013819) - T[277-496] 4.6E-30 - T[533-726] 5.6E-27 |
| PRINTS |
LipOase_C (IPR013819) - T[415-432] 3.5E-10 - T[433-450] 3.5E-10 - T[453-473] 3.5E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOX5_HUMAN | 34.348 % | 411 | 3.41E-134 |
| LX12B_HUMAN | 30.909 % | 349 | 5.09E-110 |
| LOX12_HUMAN | 32.006 % | 344 | 1.92E-108 |