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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S10.g11761.01.t

Possible name(s)

EIF3A

Gene model

Harore.CG.MTP2014.S10.g11761

Location

S10 [281,471 / 284,945]

Sequences

Amino acid sequence

Length: 1,157

>Harore.CG.MTP2014.S10.g11761.01.p
MPEYFQRPENALKRAQEFLDVGKLKPALDVLSDVLRSKKHRTWQKVHEQIITKYLQLCVE
LRKSQAAKEGLYQYKIICQQVNIKSLEDAVKNYLAMAEQETEKAKDKSTETALQMVEDLD
MIDSPEGVLLSAVTGEKTQDRTNRLMLTPWVKFLWESYRQCLDLLRNNNRVEKLYQDIAL
DAFEFCLKYDRRTEFRKLCDNLRNHVKLSEQRHPTAVSINLSNTESQLLHLHTRIAQLDS
AIKIELWQEAFKAVEDIHYLMSLSKKPAKPQVLVNFHSKLSLVFWKAGNMLFHASARHHL
FRLTKEMKKNPTKDDLSRMASLMLVSTLAIPITEQKHGIGKMLDMESALIDKHLKLAKLL
GLSRPPTRASLIEDLKKHNILQYTPKQLRDLFQWIEVDFHPLRLSSRIATSLLWIREQTK
EPELAQYIPALEGNVVSRVLQQMAQVYHTIEFSHLLSLLPFCTAFQLERAIIDASRNGQI
QVRIDHKRGALSFGTDLNASPLYVEDEFFEPQRLQPLPSEKVSQQFNEMAQALHKAYNIL
KPASEAEEMQKRREVILALFNKTWRKEQQNILQRRQVIEMRKEQLEEFSREKEKQEQKAV
LEQEEAVKVAEQQRLSKEMQEREEMRRKEEKDEEERRVAQDRLEMIRKSELGAKMLKDID
VETFTKIDPDELMKRQMETMEREKKDMQDRLKAQEKKVDYFERAKRIEEIPLLKKKYDDK
RIKDEKKWEEMEKERIENLKTEKKSMLQAKARLERMTGDRDIFLQDLRDSRRLVYEQKKA
EFDSMMAKMRAIRLAERKRERKENRRQEWLKEKEEHQQRLRDEQTKKESEEKERMEREKE
EEEARACEEKMNALQEQERKRQEREREIEAKIAAQQKFPGERDRDAWGPPGRRDGQDAWR
GNRDDGPRRRDDGWRKDGPSGRSTSPDRAWGRGSMGRRDGPPRDRDFDGPPRERMDGPRD
RGFMRDDYRPPRDAPRRGYDGPNDGPMDWRTKRRSPSPRGRRSPSPRRFRQGSPRRRSPP
GRGSPVRRGSPMGRHRSPLQGSPPLGRRRSPMGQRSPPPGEWRRNPDRSPPPPRRDTPSD
GGAWRSRPGQRDADAWRRDNRGPPTGGRDVWRGRGDDRDRAGDDRGPPDDRRWGPRRGLS
PPRKDRLADRDERPIRN

Nucleotide sequence

Length: 3,474

>Harore.CG.MTP2014.S10.g11761.01.t
ATGCCGGAATACTTCCAAAGGCCCGAAAACGCTTTGAAAAGAGCTCAAGAATTTCTCGAT
GTAGGGAAGCTGAAGCCCGCACTGGACGTTCTGAGCGATGTATTGCGTAGTAAAAAGCAT
CGCACTTGGCAGAAAGTGCACGAGCAAATCATAACAAAGTACTTGCAACTGTGTGTGGAA
CTTCGTAAAAGCCAAGCTGCGAAGGAAGGCCTGTATCAGTACAAAATTATCTGCCAACAA
GTGAATATAAAGTCGCTTGAAGATGCCGTGAAAAATTACCTAGCGATGGCGGAACAGGAA
ACTGAGAAAGCTAAGGACAAGTCGACAGAGACGGCTTTGCAAATGGTCGAGGACCTTGAC
ATGATCGACTCGCCCGAAGGTGTCCTGCTCAGTGCCGTAACCGGAGAAAAGACGCAAGAT
CGAACCAACCGACTGATGCTGACACCTTGGGTTAAATTTCTGTGGGAAAGTTACCGTCAG
TGTCTCGACTTGCTCAGAAATAATAACAGGGTCGAGAAGCTCTATCAAGACATCGCGCTA
GATGCTTTCGAATTCTGCCTGAAGTACGATAGACGTACAGAGTTTCGGAAACTCTGCGAT
AACCTTAGGAATCATGTCAAGCTCAGTGAGCAACGTCATCCGACTGCCGTGTCCATCAAT
CTGTCCAATACAGAGAGTCAATTACTTCACTTGCACACGAGAATCGCCCAGTTGGACAGT
GCCATAAAAATTGAACTCTGGCAGGAAGCATTCAAGGCTGTTGAAGATATCCACTATCTC
ATGTCGCTGTCAAAGAAACCTGCCAAACCACAGGTTTTGGTCAATTTCCATTCTAAACTG
TCGCTAGTGTTTTGGAAAGCGGGCAACATGCTGTTTCACGCCAGTGCCAGGCACCATCTC
TTCCGTCTGACTAAGGAGATGAAGAAAAACCCAACCAAAGATGATCTCTCCAGGATGGCA
TCTCTCATGTTAGTCTCGACGCTCGCCATACCGATCACGGAACAGAAACATGGGATCGGT
AAAATGCTTGATATGGAAAGTGCCTTGATAGATAAGCACCTGAAACTGGCAAAACTGCTT
GGTCTTAGCCGTCCCCCTACTCGTGCCAGCCTGATTGAGGATCTAAAGAAGCACAACATT
CTTCAGTACACTCCGAAACAGCTTAGAGATTTGTTCCAATGGATCGAAGTAGATTTTCAT
CCTCTTCGATTGAGTTCTCGAATCGCAACTTCTCTGCTGTGGATCCGAGAACAAACGAAA
GAACCTGAACTTGCACAATACATCCCGGCACTTGAGGGAAATGTAGTCTCTCGAGTCTTA
CAGCAAATGGCTCAGGTATATCACACCATCGAGTTTTCACACTTGCTCAGCTTGCTGCCA
TTTTGCACTGCGTTTCAGCTAGAACGGGCTATCATAGATGCTTCTCGTAATGGCCAGATC
CAAGTGCGTATCGATCACAAACGTGGGGCACTGAGCTTCGGGACCGATTTGAACGCATCT
CCCCTGTACGTGGAGGATGAATTTTTTGAACCGCAGAGACTACAGCCACTGCCGAGCGAG
AAAGTCTCGCAGCAGTTCAACGAGATGGCTCAAGCTCTCCATAAGGCGTACAACATCCTT
AAGCCTGCGAGCGAAGCTGAAGAAATGCAGAAAAGAAGAGAAGTGATTCTTGCCCTGTTC
AACAAAACTTGGCGTAAAGAGCAACAGAACATCTTGCAACGTCGCCAGGTTATCGAGATG
AGAAAAGAACAATTGGAAGAATTCAGTCGCGAAAAAGAAAAACAAGAACAGAAAGCAGTT
CTTGAGCAAGAGGAGGCAGTGAAGGTTGCTGAGCAACAGCGCTTGAGCAAAGAGATGCAG
GAGAGAGAAGAAATGCGTCGTAAGGAAGAAAAAGATGAAGAAGAACGGCGTGTGGCTCAG
GACAGACTCGAGATGATACGCAAGAGTGAATTGGGTGCCAAGATGTTGAAAGACATTGAT
GTAGAGACCTTCACAAAAATAGATCCTGATGAGCTGATGAAGAGGCAGATGGAAACAATG
GAAAGAGAAAAGAAAGACATGCAAGACAGATTGAAAGCACAGGAAAAGAAAGTGGATTAT
TTCGAGCGGGCCAAGCGTATCGAAGAGATACCATTGCTCAAGAAAAAGTATGATGATAAA
CGAATCAAGGACGAAAAGAAATGGGAAGAGATGGAAAAAGAACGCATTGAAAACTTGAAA
ACAGAAAAGAAAAGCATGCTTCAGGCAAAAGCCAGACTTGAAAGAATGACTGGGGATCGG
GACATCTTTTTACAGGATCTCCGAGATTCCCGGCGACTTGTGTACGAACAGAAAAAAGCT
GAGTTTGACTCCATGATGGCGAAGATGCGAGCGATAAGATTGGCTGAGAGAAAACGGGAA
CGCAAGGAAAACAGGCGACAAGAATGGCTCAAAGAAAAGGAAGAACACCAACAGAGGTTG
CGTGATGAACAGACGAAAAAAGAAAGTGAAGAAAAAGAGAGAATGGAAAGAGAAAAAGAA
GAGGAAGAGGCTCGTGCTTGCGAAGAAAAAATGAATGCCTTGCAGGAACAAGAGAGAAAA
CGACAAGAACGAGAGCGTGAAATCGAAGCAAAAATCGCCGCTCAGCAGAAATTCCCTGGA
GAAAGAGACAGGGATGCTTGGGGTCCACCTGGTCGCCGCGACGGCCAGGATGCTTGGCGA
GGAAATCGAGACGATGGTCCAAGACGAAGGGACGATGGCTGGCGAAAGGATGGTCCTTCC
GGTAGAAGTACTTCACCTGACAGAGCTTGGGGAAGGGGTAGCATGGGCAGACGTGACGGA
CCTCCTCGTGATAGAGACTTTGATGGACCTCCACGGGAAAGAATGGATGGTCCTCGGGAT
CGTGGATTCATGAGAGATGATTATAGACCACCCAGAGATGCTCCTAGAAGAGGCTATGAT
GGCCCTAATGATGGCCCAATGGATTGGAGAACAAAACGCAGATCACCATCACCTCGGGGA
CGTAGATCTCCATCCCCACGCAGATTCAGACAAGGCTCTCCTCGACGTAGATCGCCTCCA
GGAAGAGGTTCTCCTGTACGTAGAGGCTCACCCATGGGAAGGCATAGATCTCCACTACAG
GGAAGTCCACCTCTGGGAAGACGACGATCACCAATGGGTCAGAGAAGTCCACCTCCTGGA
GAATGGCGTAGAAACCCAGATAGGTCTCCACCACCACCTCGACGTGACACACCATCAGAT
GGTGGCGCATGGAGGAGTAGACCTGGGCAAAGGGATGCAGATGCTTGGCGCAGAGATAAT
AGAGGACCACCTACTGGGGGTAGAGATGTATGGAGAGGCAGAGGAGATGATCGAGATCGT
GCGGGAGATGATAGAGGTCCACCTGATGACAGGCGATGGGGGCCAAGAAGAGGATTATCA
CCCCCAAGAAAAGATCGACTAGCAGACAGAGACGAGAGGCCAATCAGAAATTAA

InterProScan

Hamap
EIF3A (IPR027512) - T[1-982] 26.533
Pfam
PCI_dom (IPR000717) - T[368-494] 8.4E-15
SMART
PCI_dom (IPR000717) - T[426-510] 5.7E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3A_HUMAN 48.943 % 917 0