- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S10.g12402.01.t
Possible name(s)
H1F0; HIST1H1T; SHPRH
Gene model
Location
S10 [406,936 / 407,515]
Amino acid sequence
Length: 192
>Harore.CG.MTP2014.S10.g12402.01.p
MIAAAINCENSPKGISTLKCRRYICSNYKVAATVTVYLKNSINRLMRSGYLVQTKGKGAA
GSFKLSTASKDLEKQKAQQIRKKEREQAKKEKTAVKKTTKKPSTTGGSAKSKKAVAKKTA
VIKKIKSAPKKTPVKKLTTGKKRGRKPAAAKTGSKKTPAKSPPKKTKAPTKKSSPKKKTA
AKRAGARKTAKK
Nucleotide sequence
Length: 579
>Harore.CG.MTP2014.S10.g12402.01.t
ATGATAGCTGCTGCTATCAATTGCGAGAACTCTCCAAAAGGAATTTCGACTTTGAAATGC
CGGCGTTACATATGCAGCAACTATAAAGTGGCCGCAACGGTTACGGTTTATCTCAAGAAC
TCGATAAACCGACTGATGAGATCAGGCTATCTGGTCCAAACGAAAGGAAAGGGTGCTGCG
GGTTCTTTCAAACTGAGCACGGCCTCCAAAGACCTCGAAAAGCAAAAAGCGCAGCAGATA
CGTAAGAAGGAAAGAGAACAAGCTAAAAAGGAAAAGACTGCTGTTAAGAAAACTACTAAG
AAACCATCGACGACCGGAGGATCGGCGAAATCAAAGAAAGCTGTCGCGAAAAAGACCGCG
GTGATCAAAAAAATAAAGTCGGCACCCAAAAAAACTCCCGTGAAGAAACTGACGACCGGG
AAGAAGAGAGGCAGGAAGCCAGCCGCTGCCAAAACGGGGTCTAAGAAAACTCCTGCCAAA
TCACCACCCAAAAAGACGAAAGCCCCGACGAAGAAGTCCTCTCCCAAAAAGAAGACAGCA
GCCAAGAGGGCGGGTGCGAGGAAAACGGCCAAGAAATAG
| ProSiteProfiles |
Histone_H1/H5_H15 (IPR005818) - T[1-67] 19.637 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[1-80] 1.1E-16 |
| SMART |
Histone_H1/H5_H15 (IPR005818) - T[1-57] 0.0026 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[1-66] 3.37E-12 |
| Pfam |
Histone_H1/H5_H15 (IPR005818) - T[1-66] 1.7E-15 |
| PRINTS |
Histone_H5 (IPR005819) - T[8-25] 1.8E-12 - T[28-46] 1.8E-12 - T[49-73] 1.8E-12 - T[124-141] 1.8E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|