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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S10.g12722.01.t

Possible name(s)

CNOT2; CNOT3

Location

S10 [338,222 / 341,788]

Sequences

Amino acid sequence

Length: 521

>Harore.CG.MTP2014.S10.g12722.01.p
MFSSGLGGAQKKSNMMLGQTQSSHFSSPLYGQQNKHESNVIGSLGQFGRSYSIPGSLTPT
SLGGDMLNQQSQSRGILPMSRNSMGQPPNSSSQISNSLLSGRPGMSPTRGISPSDMLSLK
QPMRQLGFNSTISRNQSFLSNQSMGMNAIGSESLSQFRQHQHQLGPNGSSGVLDISEFPV
LKGGTAMSSGITNGISNPFNLDQAEFPALAQRTRPIGSQPSNSLDSKPPYVGMLNKQNDN
AEFQIDNDEFPALPGGAGATAAMNVMKAVFPEQDGRGDESNHKFGPLGNLQALGEDKSNV
TGMSINQYSNQQKGIQVLQDNSIKSIPTSMLTDQYGVVGLLAFIKAAETDPTLVHLALGN
DLTTLGLNLNSPENLYHKFQSPFSRQPCRPQDIDFFVPSEYLTNAHIRDKLAPIKLNRYG
EDLLFYVYYTNPGDVLQLAAAAELYNRDWRYHKEERVWITRAPGIEPRMKSTAYEQGTYY
YFDCQNWRKVAKEFHLEYDKLEERPHLPNLMSLHFNPAQHA

Nucleotide sequence

Length: 2,056

>Harore.CG.MTP2014.S10.g12722.01.t
AATTAAAGAAAACTTTGGTGCTTTGTCACATATCGATATGTCAGTTGTTGAATAGTAAGG
CGATAAATATAATTTGAACGTATAAACACTATGTTTAGCTCTGGTCTTGGAGGTGCTCAA
AAGAAATCGAACATGATGTTGGGTCAGACGCAGTCTTCACATTTTTCATCTCCTTTGTAT
GGACAACAAAACAAGCATGAATCTAATGTCATCGGAAGCCTAGGACAGTTTGGCAGGAGT
TACTCAATACCAGGAAGTTTAACACCAACGAGTTTAGGAGGGGATATGCTGAATCAGCAG
TCCCAGAGCAGGGGAATTCTACCTATGTCTAGGAACTCAATGGGCCAACCTCCCAATTCA
TCATCTCAAATCAGTAACAGTTTATTATCAGGAAGGCCGGGGATGAGTCCAACGAGAGGG
ATTTCTCCTTCTGACATGCTCAGCCTGAAGCAACCAATGAGACAGTTGGGATTTAATTCA
ACTATTTCAAGGAATCAATCATTTCTAAGCAATCAGTCAATGGGAATGAATGCGATTGGG
AGTGAAAGTCTATCGCAGTTTCGACAACATCAGCATCAATTGGGTCCCAACGGTTCATCA
GGTGTACTAGACATCAGCGAGTTCCCGGTTCTAAAAGGAGGTACGGCAATGTCAAGTGGA
ATTACTAATGGAATATCGAATCCTTTTAATCTTGATCAAGCTGAATTTCCAGCACTGGCT
CAAAGGACGAGACCTATCGGCTCACAGCCGTCCAATTCGTTGGATTCGAAACCACCCTAT
GTCGGAATGCTGAACAAACAAAATGATAATGCAGAGTTTCAGATAGACAATGATGAATTC
CCAGCATTACCTGGTGGCGCTGGTGCAACAGCTGCAATGAATGTCATGAAAGCAGTGTTT
CCCGAACAAGATGGCAGAGGCGATGAATCAAATCATAAATTTGGTCCATTGGGAAATTTG
CAGGCGCTAGGCGAAGATAAATCAAATGTTACCGGCATGTCCATAAACCAATACTCGAAC
CAACAAAAAGGCATTCAAGTTTTACAAGACAACTCAATAAAAAGTATCCCGACAAGTATG
CTAACTGATCAGTACGGTGTTGTCGGTTTGCTAGCATTCATCAAAGCTGCGGAAACAGAC
CCAACGTTGGTTCATCTTGCCCTCGGAAATGATCTCACTACCCTAGGACTAAATCTCAAC
TCTCCCGAAAACTTGTACCATAAATTTCAATCACCGTTTTCAAGACAACCTTGTAGACCC
CAAGATATCGATTTCTTTGTACCGAGTGAATATTTGACGAATGCGCACATCCGAGATAAA
CTTGCCCCAATCAAGCTAAACCGATACGGAGAAGACTTACTTTTTTACGTTTACTACACG
AATCCAGGAGATGTCCTTCAACTTGCAGCCGCAGCAGAACTGTACAACCGTGACTGGAGA
TATCACAAAGAAGAAAGGGTTTGGATAACGAGAGCACCAGGAATTGAGCCAAGGATGAAA
AGCACGGCGTACGAACAAGGAACATACTATTATTTTGATTGCCAGAACTGGAGAAAAGTT
GCCAAGGAATTTCATCTTGAATACGATAAATTAGAAGAGAGACCACATCTACCAAACCTT
ATGTCATTGCACTTTAATCCGGCGCAGCATGCGTGATAAACGATCATCGGAATACAACGA
ATTTGTTGGTAAATTCATCACAAACCCTGGACCAACATGACTATGCCACTACATTTTCCT
GTTCTTCACGCAGTTCTTGTTACTTTATTTTCCATAAAATGACTGAGATCAGGCTTCTTC
AATTTCCGTTAGAAAAAAAAACTCGACATAAAATATTGTGCAAAACCTGGTTGAATTTTT
CCCTCTCGTTTACGGAGTACATACATTCTTCTGACTTTGTTGTCTGTCGACGTATGCGAT
GGCGACTTTTTATTTCTTTATTTTCCCAAACGAAGAGTTTTGTACCTGCCTTTTTGAGAG
CTATGAAATTTTGACGATAAATTCTATATTTTGGGATCTATTGTCTGCCCGTGCATTAAA
ATAATTAAAAAAGAAC

InterProScan

Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[325-521] 7.7E-81
Pfam
NOT (IPR007282) - T[378-501] 1.3E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT2_HUMAN 48.052 % 402 3.95E-135





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