- Clone 'cien59428' >
- Clone 'mae39b19' >
- Transcript 'KH2012:KH.C4.399.v1....' >
- Transcript 'KH2012:KH.C2.108.v1....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S112.g04283.01.t
Possible name(s)
FZD1; FZD6; SMO
Gene model
Location
S112 [57,692 / 65,117]
Amino acid sequence
Length: 780
>Harore.CG.MTP2014.S112.g04283.01.p
FSFVKILKCSSIVSRIAMAFNISFGSEGDCQKATTEKCIPLNGTTCFGAQLDYMYTSIEL
ADDSDTLHMANQKLLLWSGLRSVPKCWEVIQPLLCSLYLPKCENNTIHLPARTLCQKTRL
PCKIVEIENGWPGFMLCENDKVFGDNCPETINTNQFNKSDCETPLMATSNPSSWYEGVEG
CGLQCMNPLFNQVEHDDMHLFIAVCSSITMVCTLFAMLSFFIDWKNSSKYPARIIFYINV
CFFLCSFGWLAQFFQEGRNEIVCRRDGTARLGEPVGQGESPSCVIIFVLVYFFVMAGTAW
FVVLSYSWMLMFKALGSEQQPLKGKTLYFHLFVWSVSFILLIASLAVSQIDGNSMSGICF
IGYKNHWYRMGFLLVPIGMMLFTGGFFLFGGLHALLTIKNSHDGLLSENAVSKITWTMIR
IGVFAFFAFFFVIIAFAADTYEIVNQPMWDRSFRKYIRCEANITILEKLNEEIVDPAARA
CHIANRPNISVMKLHLFAMFGTGIVMSAWVWTRASLMNWRRAWFKLIGRSDNEMKRIRRR
SKLIAKAFANRHALGIGKRKTVRDTEEEENSGGINPEDLEFSEHTMTHQDPVGMDFDLNS
VSQELSSEWVRQVPQMVRRRGAIMPQPIPSSSPVPSSHQDVDDDGVNISWARAKNKSSGS
TPNRSISELPPLITSRTSRKTSGNNANSPWHVPTYETRVFQPQIGESFPGFIREDQFHEG
EIYNEQRYHGISEEPSQLPLGTPCSNTDVLSVRRKANTPLTRPPLRSSVDKPTTSTREAW
Nucleotide sequence
Length: 2,724
>Harore.CG.MTP2014.S112.g04283.01.t
TATTTAGCTTTGTTAAAATATTAAAATGTAGCAGTATAGTAAGTCGAATAGCAATGGCAT
TTAACATTTCCTTTGGAAGTGAAGGGGATTGCCAAAAGGCAACGACTGAAAAATGCATTC
CACTGAACGGAACTACGTGTTTCGGAGCGCAACTCGACTATATGTACACTTCGATAGAAC
TGGCGGATGATTCCGACACTTTACATATGGCGAATCAAAAGCTACTATTGTGGTCAGGAC
TCAGAAGTGTCCCCAAGTGCTGGGAAGTTATACAACCGTTACTCTGTTCTCTTTACTTGC
CTAAATGTGAAAACAATACTATTCATCTTCCTGCCAGAACTCTATGTCAGAAGACCCGCT
TGCCTTGCAAGATCGTCGAAATTGAAAATGGCTGGCCGGGCTTTATGCTTTGTGAAAACG
ATAAAGTATTTGGAGACAATTGTCCTGAAACGATCAACACCAATCAGTTCAACAAATCAG
ACTGTGAAACGCCTCTCATGGCAACATCCAATCCCTCTTCCTGGTACGAGGGAGTAGAGG
GATGTGGTCTGCAATGCATGAACCCGCTGTTTAATCAGGTGGAGCACGACGACATGCACC
TGTTCATTGCTGTATGTAGCTCAATAACGATGGTCTGTACCTTGTTTGCGATGCTATCCT
TCTTCATTGACTGGAAGAATTCGAGCAAGTATCCGGCCCGAATCATATTCTACATCAATG
TCTGCTTCTTCCTGTGTAGTTTCGGCTGGCTAGCTCAGTTTTTTCAAGAAGGAAGAAATG
AAATCGTTTGTAGAAGGGATGGTACGGCTAGGCTAGGTGAACCGGTTGGTCAAGGAGAAT
CTCCATCCTGTGTTATCATTTTTGTCCTCGTCTACTTTTTCGTGATGGCTGGCACTGCCT
GGTTTGTTGTTTTGTCCTATTCCTGGATGCTGATGTTCAAGGCGCTGGGATCCGAACAGC
AGCCACTCAAGGGCAAGACTCTGTATTTCCATTTGTTTGTGTGGTCAGTTTCGTTCATAC
TTTTGATAGCTTCTCTCGCCGTGTCACAGATCGATGGTAATTCTATGAGTGGGATATGCT
TTATCGGCTACAAAAATCATTGGTACAGAATGGGTTTCTTGCTTGTGCCAATCGGCATGA
TGCTCTTCACTGGCGGATTTTTCCTTTTCGGTGGATTGCATGCCCTGTTGACCATTAAAA
ACAGCCACGATGGACTATTGAGCGAGAATGCGGTGTCAAAAATAACATGGACGATGATAA
GGATAGGAGTTTTTGCCTTCTTCGCATTCTTCTTTGTGATCATAGCGTTTGCTGCTGATA
CCTACGAGATTGTGAACCAGCCTATGTGGGACAGAAGCTTCCGTAAATATATCAGATGCG
AGGCCAACATCACAATTTTGGAGAAACTCAACGAGGAGATTGTAGATCCTGCCGCCAGAG
CTTGTCATATTGCCAACCGACCAAATATCTCAGTGATGAAGCTTCACTTGTTTGCAATGT
TTGGGACAGGTATCGTAATGAGTGCTTGGGTGTGGACTCGTGCCTCGTTGATGAACTGGC
GTCGTGCATGGTTCAAACTGATAGGTAGAAGTGACAACGAAATGAAAAGAATCAGAAGAA
GGAGCAAGTTGATTGCGAAAGCCTTCGCAAACCGTCATGCATTAGGCATTGGTAAAAGAA
AGACAGTACGTGACACCGAGGAGGAAGAAAACAGCGGTGGCATCAATCCAGAAGATTTAG
AATTCAGTGAGCATACAATGACACATCAGGATCCAGTTGGAATGGATTTTGATCTAAATA
GTGTTTCTCAGGAACTGTCATCTGAGTGGGTTCGACAGGTGCCTCAGATGGTCAGACGTC
GTGGTGCCATAATGCCACAGCCAATTCCGTCAAGTTCGCCTGTGCCCTCTTCACATCAGG
ATGTAGATGATGACGGTGTGAACATAAGTTGGGCACGCGCAAAAAATAAGAGTTCAGGTT
CAACTCCTAACAGAAGTATAAGTGAGCTGCCGCCTCTGATAACATCGAGAACTTCTAGGA
AAACTTCTGGCAACAATGCAAACTCTCCCTGGCATGTACCCACGTACGAAACAAGAGTTT
TTCAGCCTCAAATCGGAGAGTCCTTCCCTGGGTTTATTAGAGAAGACCAATTTCATGAGG
GTGAAATTTATAATGAGCAGAGATACCATGGCATCAGTGAGGAACCATCTCAATTACCAT
TAGGCACACCCTGTAGTAACACAGATGTGCTGAGTGTCCGTCGCAAGGCCAACACTCCTT
TGACAAGACCTCCTCTTAGATCTTCGGTTGATAAGCCAACGACTTCAACCAGAGAGGCGT
GGTGATTGCCAACCAGATCAAATGTAACTTTTTTCAATACCAGAAAAAGAAGAATTTGTA
TTCTGTATTAAAAGGTTCCTCTCGGTGGAATATTTAGGAGCATGCAAGCAAATTCACTTT
TCATATTGAATTGAGCTATGTTATGCTAGGAGCATAGCAACTGATAAACCTATACATTTG
ATATACTTTTTTTATTATTATTTCCACATAGACCATCCTTTGATTCTCACCTAATAGTGC
TTTAGCTAACTCTGCCTTAAAGCCATATTTTATATTTTTTTATTTCGTGTATCAATATTT
CAAGAACTTGGTCTCTCAGCTATGAATAACATGTTGTAAAGTATTCTTACTTATGATTAG
GGAGGTACAATACAGAATTTAGAA
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[23-147] 2.7E-37 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[26-577] 2.8E-247 |
| PANTHER |
SMO (IPR026544) - T[26-577] 2.8E-247 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[33-150] 14.62 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[37-148] 4.32E-18 |
| SMART |
Frizzled_dom (IPR020067) - T[37-152] 2.8E-20 |
| Pfam |
Frizzled_dom (IPR020067) - T[38-139] 6.2E-11 |
| SMART |
Frizzled/Smoothened_TM (IPR000539) - T[188-529] 5.9E-115 |
| Pfam |
Frizzled/Smoothened_TM (IPR000539) - T[189-525] 1.7E-83 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[198-518] 25.161 |
| PRINTS |
Frizzled/Smoothened_TM (IPR000539) - T[201-223] 2.9E-39 - T[230-252] 2.9E-39 - T[285-309] 2.9E-39 - T[329-352] 2.9E-39 - T[374-396] 2.9E-39 - T[417-438] 2.9E-39 - T[491-511] 2.9E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FZD1_HUMAN | 26.908 % | 169 | 4.29E-44 |
| FZD6_HUMAN | 25.651 % | 163 | 5.37E-42 |
| SMO_HUMAN | 53.496 % | 676 | 0 |