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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S10...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S113.g15476.01.t

Possible name(s)

POLA2

Gene model

Harore.CG.MTP2014.S113.g15476

Location

S113 [72,064 / 76,283]

Sequences

Amino acid sequence

Length: 699

>Harore.CG.MTP2014.S113.g15476.01.p
MHGTFVPTCFPALSDLFSGQWLFLATYFGILIMSLTSVEEIKESLSVFAITVNDDDVLFK
LQEIALLFKYDADSLVDEWLAYQSTHNCGLTLPDLEKLLIEKKCGKNRIIANKTPISARK
RKPLGVYTSENFNDFFDMHIEGMEDDVLDAYGTPDCVKKTKKPNHVTPKSALKSRHGIGN
ILDDSPMFSPSSISPTRSSQKYGVRQNPGEVLIAFGDDLKSFENHPKSQNLNISIACNKN
WNVQKTYKYMFQKVLDLSDVMNETIETLAELISKRYADEIDVFAPCSLPSQEPVFIVGRV
CCDQGGGVGKLNSDSVILQGDRATSYGDSVSVDLSQIDEYSLFPGQIIAMQGTNPTGKKF
IATKIFTPGIESCNNSNTITDCGPTHVLIASGPFTTSDSLSFEPLTDLISTVKEKQPDVT
ILIGPLVDGKNDEVKNGRLTVPFQELHQKQIDLVIEELKGCTKLVFVSSQRDVCSHPVYP
QPPYTSSRQSQNVTLVGDPSQLQINGLHFAVTSNDILLHLGAEETCRVKGMSDRFSRLSR
HILDQRSLYPLMPSHETVNIDWIAAEVYGCLRTKPHFLILPSDLKCFVKDIDGCVCINPG
RLSKGMTGGSFAEILVEKFNEDNVTALNVATFLYCYTALYLNSIQLNIMFLSEKDLGVVK
KMDKGKSLFIAISGNHSDKSKHSVPLTPQYDILLTIQIS

Nucleotide sequence

Length: 2,100

>Harore.CG.MTP2014.S113.g15476.01.t
ATGCACGGAACCTTCGTACCCACATGTTTTCCCGCGCTGAGTGATTTGTTCAGCGGTCAG
TGGCTATTTTTAGCGACATATTTTGGTATATTAATCATGTCACTTACTTCTGTGGAAGAA
ATAAAGGAAAGCTTATCTGTGTTTGCGATTACAGTAAACGATGACGATGTCCTTTTCAAA
TTACAAGAAATTGCTCTGTTGTTTAAATATGATGCTGACTCATTAGTTGACGAATGGCTC
GCTTACCAAAGCACACACAATTGCGGCTTGACTCTCCCCGATCTAGAAAAATTGCTTATA
GAGAAAAAATGTGGGAAAAATCGAATCATTGCTAATAAAACACCGATTTCCGCCCGGAAA
AGGAAGCCACTCGGTGTGTATACTTCCGAAAATTTCAATGATTTCTTTGACATGCACATT
GAAGGCATGGAAGATGATGTTCTCGATGCGTACGGCACGCCTGACTGTGTGAAAAAAACA
AAAAAGCCAAATCATGTTACACCCAAATCAGCGCTTAAATCCAGGCATGGAATTGGGAAT
ATATTGGACGACAGTCCGATGTTTTCCCCATCTTCAATATCACCCACCAGATCATCACAA
AAATATGGCGTCCGTCAAAATCCGGGAGAAGTTTTGATAGCTTTTGGAGATGATCTAAAA
AGCTTTGAAAATCATCCAAAATCCCAAAACTTGAACATTTCAATTGCTTGCAACAAAAAC
TGGAATGTTCAGAAGACATACAAATACATGTTTCAAAAAGTTTTGGACTTATCAGACGTT
ATGAACGAAACCATCGAAACGTTGGCGGAATTGATTAGTAAACGTTACGCTGATGAAATC
GATGTTTTTGCACCTTGTTCGTTGCCCAGTCAAGAACCGGTTTTTATTGTCGGACGAGTT
TGTTGCGACCAGGGTGGAGGAGTCGGGAAGTTAAATTCGGATTCTGTCATTCTTCAGGGT
GATAGAGCGACATCATATGGTGATTCTGTATCGGTCGATTTGAGTCAAATCGATGAGTAC
TCTCTGTTTCCAGGACAAATCATTGCAATGCAAGGTACCAATCCAACAGGAAAAAAATTC
ATCGCTACCAAGATTTTTACACCTGGTATAGAGTCGTGCAACAATTCTAACACAATAACA
GATTGTGGTCCCACACATGTTTTGATCGCTTCCGGTCCTTTTACCACCTCAGACAGTTTG
AGTTTTGAGCCATTAACTGACTTGATATCCACAGTAAAGGAAAAACAACCGGATGTCACG
ATTTTGATAGGTCCTTTAGTCGACGGTAAAAACGATGAGGTGAAAAATGGGAGGTTAACT
GTTCCTTTCCAAGAGCTACATCAGAAGCAAATAGATTTAGTTATCGAAGAGCTGAAGGGG
TGTACGAAATTAGTGTTTGTTTCTTCACAACGAGATGTTTGTTCACATCCTGTCTATCCT
CAGCCACCTTACACGTCAAGTAGGCAATCGCAGAATGTAACCTTAGTTGGTGATCCCAGT
CAATTACAAATTAATGGACTCCATTTCGCCGTAACATCTAATGACATATTGTTACATCTG
GGAGCTGAGGAAACATGCAGAGTAAAAGGGATGTCAGATCGTTTCAGCCGCCTTTCAAGG
CATATCCTCGACCAGAGAAGTCTTTATCCTCTGATGCCATCTCATGAAACCGTAAACATT
GACTGGATAGCGGCCGAAGTCTACGGCTGCTTGAGAACAAAGCCGCATTTTCTAATCCTT
CCCTCAGACTTGAAGTGCTTTGTTAAAGACATAGACGGATGCGTTTGCATCAATCCAGGC
CGACTGAGTAAAGGAATGACCGGCGGATCATTTGCAGAGATTTTAGTTGAAAAATTTAAC
GAAGATAATGTGACTGCGTTAAATGTTGCCACGTTTTTATACTGCTACACTGCTTTGTAT
CTAAACTCAATACAGCTCAATATAATGTTCCTCTCAGAAAAGGACTTGGGAGTGGTCAAA
AAAATGGATAAAGGTAAAAGTTTATTCATAGCCATATCAGGAAATCATTCAGATAAATCA
AAACATTCTGTTCCACTAACACCACAGTATGATATTCTCCTAACTATACAAATATCCTGA

InterProScan

PIRSF
DNA_pol_alpha_bsu (IPR016722) - T[36-646] 1.1E-139
PANTHER
DNA_pol_alpha_bsu (IPR016722) - T[37-620] 4.6E-151
Pfam
Pol_alpha_B_N (IPR013627) - T[55-290] 1.8E-13
Pfam
DNA_pol_alpha/epsilon_bsu (IPR007185) - T[387-588] 2.0E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DPOA2_HUMAN 37.252 % 362 1.8E-116