- Clone 'cima816651' >
- Clone 'AHC0AAA212YN05' >
- Clone 'cien98071' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S117.g12083.01.t
Possible name(s)
SGSM3; TBC1D2; TBC1D2B
Gene model
Location
S117 [114,635 / 122,783]
Amino acid sequence
Length: 882
>Harore.CG.MTP2014.S117.g12083.01.p
MDVNSLFPYQYPLILPTYGLVTNELFQTGRDDVNGLQSNVLLQNTKASVHEEAFRAIMEM
LFGTPNTNGYSGKGFKAESLEEEDIENENEVSQQVIKPVPGGPFSALISSMWPQNILNKI
AKAEDADTPPEYRYDEFGFRVDEEDGAEPNSSKNLGVPLVEDPQHKLQWQAHLEFTLNSE
VGDLTWDKVRMTLPRSVKLTQLIRDGIPHSMRSELWIRLSGAQRKKLKSEVTYPEIIEAS
TNDNIASSKAIEKDLLRTMPNNACFSNLDSLGIPRLRRILRGLAWLYPDNGYCQGTGMIV
SHMLLFMEEENVFWTMCSIIEGLVPSSYFSTNLIGVHADQRVLRQLLVQYLPSLDKLLME
HDIELSLISIHWFITLFAGVLHTKVLLRVWDLFFMEGSIVLFQIALGMLKLKEDMFVGIT
NSADIFNILSDLPSLIDDADLLLQCAQKTAGSLTTVVLETHRKKHLAFLLSEQGSRQPMH
NSVPRKQALRRRTYIGKLLFGSTVDDKFEYEKAKNIKQTELVADLRQAILAIIKHYRNLG
GYEDMNFEPDYSVESHQRDRDEYMHVSQTCHQRAKALLNFERHDDDELGFRKNDIITVIN
MKDEHCWIGEINGLRGWFPAKFVQLLDERSKTYTNIGDDAVNDSITDLVRGGLCPALSAI
FEHGLRRPALLGTACHPWLFIEEASNHEVEKDFDSVFSRLVLCKTFRLDEDGKVLTPEEL
LYRCVQAVNQTHNEAHAQMDVKFRSLICYGLNEQVLHLWLEILCSCTTVVSKWYHPWSYI
MSPGWVQLKCELRVLSKFTLYLSHDWELPKKKESRESLKEGVRDMLQSYARIIKETESPL
QIPRNIHIPNHTPNTSFIYICTFYSLLSACSTAINIAHTVGS
Nucleotide sequence
Length: 4,696
>Harore.CG.MTP2014.S117.g12083.01.t
GGCAACTCGAGAAGTTTATGACATGCCTAGACTTGATTTGTTGGTCCAGATTGCCAAATT
CATAATAACTTTGCTAATGGGTGGAAGTTCAACAGTAGTAATCATATATTGCGTCATCAT
ACACTGAGGAACCTTGTCTTTTCTTCTGTAACCATTATATTCAATAATTTAAGTCTTATA
TGGGTGTCAACATTGGTTAAAATGTATTCAAATTAAATCTTAGCAAGGAAGACATTCATA
AAAAATCGAACACAAAAATATTAGTGCAAAAAGCATGCATGATTGATAATCAGTTACTTC
TCATCAAGAGAATCGAGGTTGTAGCCTTTGAAGAGGCTCTCAAAATATTTTCCCAGATTT
ATCACTTGTCCAGTCCGCCAAGAATCTTCACCGGCTTGGGCAAGGAAGGATGCTCTAAGA
GTGTCACTTGCTTTGATGATACATTGTTTGGTTTCGCCCGTCAGCAGTTCAACAAAGTGA
CTAATCTCTTCAATGTATGCTTCGCTGTAACGTTGTTTAAAAGAATGATGTAGTACATCA
TGCAACATTCCATTAACTCCAGAAAAATGAACTGCTGATTTTAAAGGATTGTCACTCATC
AAGCTTCCATTTTCTCCGAATATCTCACAGGTTTGGTGATAACCATATTGAGAATCTCTT
GACAAGTCGATATGTCCTATAACACCACTGGGAAATTTGAGTACAATATATACTGTGTCT
GCATCATCCAGGTTGGCTATCTCAGGATTATGAGCATGAGCAACACTGAAGATAGTTTCA
GGTTCCTCACCTATCATCCATCGCATTAAGTCGAAGTCATGCACTGCACAGTCGTGAAAT
ATTCCACCAGAAATCTTCAGGTAAGAGAGAGGAGGTACAGGAGAATCTCTCGAACATGTT
TTAATACTCTGCTTCTGACCAATCAGTTCACGTTTCGAATACAGGTCACGGAGCTGGGGA
TCGAATCTGCGATTGAAGGCACATAAGAGTGGAACATTCTGCTTTAATGCTTCTTTATAG
CAGGTTATAGTTGATTCAAGTGTCAGTGTTAATGGTTTTTCTGATAGGACACCTTTTCCA
GCCGCTATTGCTTTCATAATAAGGCCCTCATGTGTATCTGTCGGGGTGGATATTATTATC
CCATTGACATTGGGATCTTCATAAATCATGGCATCATTTCGTTTATGTACAATTTTAGTA
CCTTCCAAATTGTAATCGAGTTTTGCTTTTCCTGCTTTTTCTAAGTCTTCGTCCACAATG
TATGCTAAATTGACTTGAGGGTGTTTCACTAGATTTTCCAAGTGAATTGTTCCCATCCTT
CCAAGTCCAAATAGTGCCAAGGTAACAGTTGCTGGTTCTGAAGATCCCATGATATCACTG
CTTAATCACCTCGACTCGTTTCGAATTTTTAAATGGACGTTAATTCTTTGTTTCCTTATC
AATATCCGTTAATACTGCCAACTTATGGTCTCGTCACGAATGAATTATTCCAGACAGGAC
GTGATGATGTTAATGGATTGCAAAGTAATGTACTTTTACAAAACACCAAAGCGAGCGTGC
ACGAGGAAGCTTTTCGAGCGATCATGGAAATGTTGTTTGGAACACCGAATACTAATGGCT
ACAGTGGTAAAGGGTTTAAAGCTGAATCTCTGGAGGAAGAAGACATAGAAAATGAGAATG
AAGTTAGTCAACAGGTAATCAAGCCTGTACCTGGAGGCCCTTTTTCGGCTTTGATCAGTT
CCATGTGGCCCCAAAATATCCTGAATAAAATAGCGAAAGCAGAAGACGCTGATACACCAC
CAGAATACAGATATGATGAATTTGGATTTCGAGTTGATGAAGAAGATGGTGCAGAGCCAA
ACAGCAGCAAGAATCTTGGAGTTCCTTTAGTGGAGGATCCACAGCATAAACTTCAATGGC
AAGCTCATCTGGAATTCACTTTAAACTCCGAGGTTGGAGATCTTACATGGGATAAAGTTA
GAATGACATTGCCACGCTCTGTCAAACTAACTCAGCTCATCAGAGATGGCATCCCGCATA
GCATGCGATCTGAACTCTGGATTAGATTATCAGGAGCGCAACGGAAAAAATTAAAAAGTG
AAGTCACTTATCCGGAGATTATTGAAGCTAGCACCAACGATAACATCGCTTCCTCGAAGG
CGATAGAGAAAGATCTTCTTCGTACAATGCCGAACAATGCATGTTTTTCCAATCTTGATA
GCCTTGGAATCCCTAGGCTGCGTCGAATTTTAAGAGGATTGGCCTGGCTTTACCCAGACA
ATGGTTACTGCCAAGGAACTGGGATGATTGTTTCACATATGCTGCTCTTCATGGAAGAGG
AAAATGTGTTTTGGACGATGTGTTCTATCATAGAAGGTCTCGTTCCTTCTTCTTATTTCA
GCACCAACTTAATTGGTGTTCATGCTGACCAAAGGGTTCTTCGTCAACTGTTGGTTCAGT
ACCTGCCGTCTTTAGATAAACTTCTCATGGAGCATGATATCGAGTTGTCACTGATCAGCA
TTCATTGGTTCATCACACTGTTTGCTGGAGTCCTTCACACAAAGGTTCTTTTACGTGTGT
GGGATCTCTTTTTTATGGAAGGTTCCATTGTTCTTTTTCAGATTGCTTTGGGCATGCTAA
AGCTGAAGGAGGATATGTTTGTTGGTATTACAAATTCTGCCGATATTTTTAATATTCTCT
CAGACCTTCCGTCTTTGATTGATGATGCTGATCTCCTACTACAGTGTGCACAGAAGACTG
CTGGATCCTTGACAACAGTTGTCCTGGAAACGCACAGAAAAAAACACTTGGCTTTCTTAC
TATCAGAACAAGGCAGTCGTCAGCCAATGCACAATTCTGTTCCACGCAAGCAAGCTCTTC
GAAGGAGAACATATATTGGGAAACTATTGTTTGGTTCGACTGTAGATGATAAGTTTGAAT
ATGAGAAAGCGAAGAACATCAAACAAACCGAATTAGTGGCAGATTTGAGACAGGCAATCC
TGGCAATCATAAAGCACTACAGAAATTTAGGAGGCTATGAAGATATGAATTTCGAGCCAG
ACTACTCAGTTGAAAGCCATCAACGCGACCGTGACGAGTACATGCACGTGTCACAGACCT
GTCATCAGAGAGCAAAGGCGCTTCTCAACTTTGAACGCCATGATGACGACGAGCTTGGCT
TTCGCAAGAATGATATCATCACTGTAATCAACATGAAAGATGAGCATTGTTGGATAGGTG
AAATAAATGGACTGAGGGGATGGTTCCCTGCCAAATTCGTACAGCTACTTGATGAACGAA
GTAAAACGTATACCAACATTGGTGATGATGCCGTAAATGATTCAATCACAGATTTAGTTC
GTGGCGGTCTCTGCCCAGCCTTGTCCGCTATATTCGAACACGGTTTACGCCGTCCGGCAT
TGCTCGGTACGGCTTGCCACCCCTGGCTGTTCATAGAGGAGGCGTCGAATCACGAAGTTG
AAAAAGACTTTGATTCTGTGTTTTCCAGGCTTGTTCTTTGCAAAACTTTCAGGCTTGACG
AAGATGGGAAAGTTCTTACACCGGAAGAATTGCTTTACAGGTGTGTTCAGGCCGTTAATC
AAACTCATAACGAAGCTCACGCTCAAATGGACGTGAAATTTCGTTCATTGATATGCTACG
GACTGAATGAGCAAGTTCTTCATCTATGGCTTGAAATTCTTTGTTCTTGCACTACCGTGG
TTTCAAAATGGTATCACCCATGGTCCTACATCATGTCTCCGGGTTGGGTTCAATTGAAAT
GCGAGTTACGTGTTCTCTCCAAATTTACTCTGTATCTTTCACATGATTGGGAGCTGCCAA
AAAAGAAAGAGTCTCGAGAATCTCTGAAAGAGGGAGTACGTGACATGCTCCAAAGCTACG
CCAGAATAATAAAAGAGACCGAGTCGCCACTACAAATACCAAGAAATATTCATATTCCGA
ACCATACGCCCAATACATCTTTTATTTATATTTGCACATTTTATTCTTTGTTGAGTGCTT
GTTCCACTGCGATTAACATTGCACATACTGTTGGATCATAAGATTTGTTTAAATTCTGTT
TTTAGCTAACAAACTTGTGATAATTGTGCACTACATATGCTGTCAAAACTGCCACTGTGG
TGGAATTCATAAAAAAAAAAACTTTACAAATAACTTCATAAAGTTTAAGGCTACTAAGGG
CGATGCAATATCTGACTAATTTGATTTTTGTGCTGTCAGCCTGTCAAGTTATATAAAGGC
TGTTGGGAGAGTTTGCAATAGGTATAGGCTATATGTTCTTTCCAATCTTATTTAATTTTT
ATAGTTTTTAAATTTGTAGTAAAAAATACTTCTTCTGTCTAGTTGAATTTTTTATCTCTT
AGTTCGTTGAATTGGACGGTTTTAAATCCATTCTTCATAGGATAGTGTAGTAACTTTAGA
TGTATAGTGTGGTACTAAGAAGCTTTTATTGAAATTTTTGTCTAGTAGCATCAGTATCTC
TGTTCCTCTGTTCTTCAGTAATGATAATGGTAATAGTGATAGTTATTTTCCAAATACATG
TCAAAAATTTATAAATTTTCATGGCTATGCACAATTTTTTTAAAGCTTATCAGGTGACGT
ATCTTTTATTAATGGTGTGACATCGTCTCGTAGTAAGATTATATTATTAAAAGTGAACAA
GGCAAGGCAAGCAAGA
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[188-354] 6.28E-37 - T[332-448] 1.91E-23 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[203-420] 1.0E-56 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[206-397] 33.33 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[210-414] 1.0E-44 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[561-629] 5.91E-18 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[569-628] 12.107 |
| SMART |
SH3_domain (IPR001452) - T[572-627] 2.0E-17 |
| CDD |
SGSM3_SH3 (IPR035833) - T[573-625] 5.06054E-33 |
| Pfam |
SH3_domain (IPR001452) - T[575-620] 1.5E-10 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[644-807] 29.312 |
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[652-684] 3.79E-12 - T[721-797] 3.79E-12 |
| Pfam |
Run_dom (IPR004012) - T[653-803] 4.2E-32 |
| SMART |
Run_dom (IPR004012) - T[743-803] 1.6E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM3_HUMAN | 63.611 % | 971 | 0 |
| TBD2B_HUMAN | 31.105 % | 177 | 9.81E-46 |
| TBD2A_HUMAN | 31.858 % | 171 | 9.21E-44 |