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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S11.g01744.01.t

Possible name(s)

FDPS; GGPS1

Gene model

Harore.CG.MTP2014.S11.g01744

Location

S11 [677,118 / 681,460]

Sequences

Amino acid sequence

Length: 420

>Harore.CG.MTP2014.S11.g01744.01.p
MSFSNVIHMDKILYIDLHVFCICVQRVASIFPVLMHSSSLYVRLQYLKKRSQRSSKYYCI
IYKMDPNVLSDSKQVWNMFDIHFDVIVKELTSVPPSLSKADTSINWSYERIKELLSYNAR
SGKRMRGITVVQSYIDILGKEKITKDGFECAMSIGWAVEILQASFLVADDVMDQSPMRRG
RPAWYKLEGIGLQAVNDGMILESCVYLIITRHCRKYPYYADLVDLFRDVTMYTQLGQSLD
METSEKPDVDFTIFTDERYNTIIKYKTSFYSFYLPVAISFYLTGCSDVETLTEGRSILTE
MGIYFQIQDDYLDAFGDPEVTGKIGTDIESNKCTWLIVNALKLCTQEQRDILQNNYGQKD
PSKKAAVLQIYKDLELPGHYKKYEEETNSRLCRLIEGFSHPNVPKSVFMTLLNRIYQRKK

Nucleotide sequence

Length: 1,452

>Harore.CG.MTP2014.S11.g01744.01.t
ATGTCATTTTCGAATGTTATTCACATGGATAAAATACTGTATATAGATTTACATGTGTTT
TGTATATGTGTACAACGTGTTGCATCCATATTTCCTGTGCTAATGCATTCCAGTTCCCTG
TATGTACGATTGCAATATTTGAAGAAGCGTTCACAGCGCTCTAGTAAGTATTATTGTATA
ATTTATAAAATGGACCCAAATGTGTTATCTGATAGCAAGCAGGTCTGGAATATGTTTGAT
ATACACTTCGACGTCATCGTAAAGGAACTGACGTCAGTGCCGCCATCATTATCGAAAGCT
GACACAAGTATAAATTGGAGTTATGAAAGAATTAAGGAATTACTGAGTTATAACGCTCGT
TCTGGAAAGAGAATGAGGGGAATTACCGTTGTTCAAAGCTACATAGACATATTGGGAAAG
GAGAAAATAACAAAGGATGGTTTTGAATGTGCTATGAGCATTGGATGGGCTGTTGAAATT
CTTCAAGCATCCTTTCTTGTTGCCGACGATGTGATGGATCAATCACCGATGAGGAGGGGG
AGACCCGCTTGGTATAAACTCGAAGGTATCGGATTGCAGGCTGTCAATGATGGAATGATT
CTGGAATCTTGCGTTTACCTCATCATCACAAGACACTGTCGAAAATACCCTTACTATGCA
GACCTTGTGGATCTCTTCAGAGACGTTACCATGTACACACAGTTGGGACAGAGTCTTGAC
ATGGAGACTTCAGAGAAGCCTGATGTGGATTTCACAATTTTTACAGACGAAAGATACAAC
ACTATTATTAAATACAAAACATCATTTTATTCCTTCTATCTACCAGTTGCAATAAGCTTT
TACTTGACAGGCTGCTCTGATGTGGAAACTCTCACAGAGGGTCGCTCTATTTTAACTGAA
ATGGGAATATATTTTCAGATTCAGGATGATTACTTGGATGCATTCGGTGATCCAGAAGTA
ACAGGAAAGATTGGAACAGATATTGAATCAAACAAATGCACATGGTTAATTGTTAATGCT
TTGAAGCTATGCACGCAAGAACAAAGAGATATATTACAGAACAACTATGGTCAAAAAGAT
CCGTCAAAAAAAGCTGCAGTCCTACAAATATACAAGGATCTTGAGTTGCCTGGACACTAC
AAAAAATATGAGGAGGAAACTAACTCCCGACTGTGTCGACTGATCGAGGGTTTCAGCCAT
CCAAATGTGCCAAAAAGCGTGTTCATGACCCTCTTAAATCGGATTTATCAAAGAAAAAAA
TGATTTCTTATGATTGGGACGAGGACCTACAGGATAGTCAAATGAGCAAATCACAGTTTG
AACAGAGGAGTTACGGAGAATGATTTAAGATCATGCTAAATCAACGTGAATGTAAACATA
TTGTTGTTAATTTATTCATCAAGGATTAGTAAAAAGAATTTTACTCTTTTTGCAATACAT
TTTTGCACTATA

InterProScan

Gene3D
Isoprenoid_synthase_dom_sf (IPR008949) - T[71-420] 6.2E-100
SUPERFAMILY
Isoprenoid_synthase_dom_sf (IPR008949) - T[86-419] 1.11E-82
Pfam
Polyprenyl_synt (IPR000092) - T[110-373] 2.4E-80
ProSitePatterns
Polyprenyl_synt_CS (IPR033749) - T[166-180] . - T[301-313] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FPPS_HUMAN 43.272 % 326 1.47E-108





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