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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S11.g04712.01.t

Possible name(s)

SPATA6; SPATA6L

Location

S11 [544,776 / 550,859]

Sequences

Amino acid sequence

Length: 543

>Harore.CG.MTP2014.S11.g04712.01.p
LMLHSFVFSFADLFSWNGFPNLIFAQHSNKYPRMPRRKALKVVVDVELHAVTCPGVFLPD
REDVFIDIDIFGHRKRTQCHPPVFPFLFHEKIRFDKVFSNATDPIQVAQELCAESVQIEL
IQLSYPGGELLGTYEDNARDFLFPTPKVSPTYPGVDREVLLQRSASFPGIAPKLEFSSRT
TIKEVTSSGRSTASEKKKKEQRVPTDLLNGGVTHETKISSKNKMYSPKKKKSKSATNTES
RRGRSSQRAKSASRGTTMWGYEQPTIASRARSPSPYTRRRMAELSISDPFESAANRKPFR
TEIDSRPDFVVRKVLDDALSLDRTPPSPRMPSCERRSPRHSGRSGKSYLSPRHNPTGSPR
MASYNSVLSQSSDDSSDMNTSLRGARGTPAGSRPSSSHSYSATVSPRRTDPSFSLADLDT
VPPSIGRRRLSPNSILLRTPLEDRLKAQPSPYEKIRDRVRALLSSPRATQIADNAMYEGE
ERYRQRLSRTPSPRSPRMSVPITDTDYWNEKASEYTGKSHRKLFEENLGKIHDDIYNKLR
SSN

Nucleotide sequence

Length: 2,705

>Harore.CG.MTP2014.S11.g04712.01.t
TATTAATGTTACATAGCTTCGTGTTTTCATTTGCAGACCTATTTAGTTGGAATGGTTTCC
CTAACCTAATTTTTGCGCAACACTCAAACAAATACCCAAGGATGCCCAGGCGAAAAGCTC
TCAAAGTCGTTGTAGATGTTGAACTGCATGCGGTCACTTGTCCAGGTGTGTTTCTACCTG
ACAGGGAAGACGTATTCATTGATATAGATATATTTGGTCACCGGAAACGTACGCAATGTC
ATCCGCCGGTTTTTCCTTTTCTCTTCCACGAAAAGATTAGATTCGACAAAGTATTCTCTA
ATGCAACTGATCCAATACAAGTGGCACAGGAACTGTGTGCCGAATCAGTTCAAATTGAAT
TAATCCAGTTGTCTTATCCAGGAGGTGAATTATTAGGTACTTATGAAGACAATGCTCGTG
ATTTTTTGTTCCCTACCCCTAAAGTTAGCCCCACCTACCCAGGGGTGGATAGGGAGGTAC
TTCTTCAGAGATCTGCAAGTTTTCCAGGAATAGCTCCGAAGTTAGAATTTTCTTCTCGGA
CAACAATCAAAGAAGTCACTTCATCTGGTCGATCAACTGCGTCGGAAAAAAAGAAAAAGG
AACAGCGAGTTCCTACTGATTTACTGAATGGTGGAGTCACGCATGAGACTAAAATATCAT
CCAAGAACAAGATGTATTCACCTAAGAAAAAGAAAAGTAAATCAGCAACAAACACTGAAT
CCCGCCGGGGAAGATCAAGTCAGAGAGCAAAAAGTGCATCCAGGGGTACTACAATGTGGG
GTTACGAACAACCCACCATTGCATCTCGAGCACGTTCCCCCTCTCCATACACAAGGAGAC
GAATGGCAGAGCTGTCGATCAGCGACCCGTTCGAATCTGCTGCAAACAGGAAACCATTTA
GGACGGAAATAGATTCGAGGCCCGACTTTGTTGTTCGTAAGGTTCTAGATGATGCCTTGT
CACTCGACCGCACACCCCCGTCACCGAGAATGCCCTCATGCGAGCGGAGGTCACCCCGGC
ACAGTGGAAGATCTGGGAAATCTTATTTGTCACCACGTCATAATCCGACCGGATCTCCTA
GAATGGCAAGCTACAATTCGGTTCTTAGTCAAAGCAGTGATGATTCAAGTGACATGAACA
CATCACTTCGTGGTGCCCGGGGCACACCCGCAGGCAGTAGACCCTCTTCCTCTCATTCAT
ATTCAGCCACTGTGTCGCCTCGGAGGACCGATCCTAGCTTCTCGCTTGCCGACTTGGACA
CCGTTCCTCCTTCGATAGGAAGAAGGCGATTATCTCCAAATTCCATCCTGTTGCGAACAC
CATTAGAGGACAGGCTTAAAGCACAGCCATCCCCTTACGAAAAAATCAGAGACAGAGTGC
GTGCATTGCTGTCTTCTCCACGAGCTACACAAATTGCGGACAACGCAATGTATGAAGGCG
AGGAACGATACAGACAACGTTTGAGTAGAACCCCTTCACCTCGCTCGCCAAGGATGTCAG
TCCCCATCACTGATACCGATTATTGGAATGAGAAAGCGTCGGAATACACAGGAAAATCAC
ACAGAAAGTTGTTCGAAGAAAACCTTGGTAAAATTCATGATGATATTTACAATAAACTCA
GGTCTTCAAATTGAACCCACCAATGTTCCAAGTATCTCTACTGTACTATTTTCTTATCAG
AATTTACAAAGTAGATTCTCTTGTCGTTAAAAGATTTTTTTTTGTAATTCAAATATAAGC
CTCTGCTACCTGTAGTGCACGTAGGCTTATATATCACATATGCATTTGTCCTCTTATGTA
GTAGTTCTTATATACTATTCTATATCTCAAGAAATTAGGCAAACAGTTTTGATTTTACAT
GCATGTAATGAGAGTTAAATACTATCTACAATATCTGGAGTGTAAAATGAATTTGATATT
CAAGTCAGCACACATAAACGCCTAATGATCTACATATTTAGTAGATTTGAGTTTACAGGT
ACAAGCCTAATGGTAAGTAAGCTTTTCTTCATGCTTTTAATTATATACTGCAAATGCAAA
GTATTCAAAGCAGTGTTTATATTAGTCTGTCACCATGCTTTATCCAGTGGAACATCTATA
ACTCGCTCTGGCTATATTCACACACTGCTAAAGTGATATTATATCCGAATTTATATACAA
CTTGATCTGTACAATGGTGAAGAAACGTTTATTTGGTTATTTCATTTCAGAGCATTATAT
CGGTGGGAATGTATAAACTCGTTTCATTAAATGGTTAATTTTCGACGACTGATTCGTGTG
CTTCGTCGCTATACATGCACTGTGGTCGAATTTTAAGCCTGTATTTTCCACCTCAAGTAG
CTTGTATTCGTATCGTACTTTGTTGCTTTCATGTTTTTTGTATTGTTTCAGTTTTGTGGT
AAATTATTGCATTGACTCTGATTTAGTGAGAAGTGAAGTTCAATGTAATCCTTTCTACCC
AGCATCTTCACTCACGTTTTAGTTTGTTTGTTTTAAGAGATTTTCTATCCGTGTTCAATT
CGTTTACTCACGAGTCGCATGAGGATATTTTGGCGTCTAGTCGTCATGGAACAACTTTTG
TAGAACAACCGATTATTTTTAAGCTGGTTTTGATAAAACATTTATATTTTTTGTAATATA
ACTATAATATTTTTAAGTACAGTAAGTACGTTTTAAGTAGTTGAAATAAAAATGAAGGAT
TCTAA

InterProScan

Pfam
SPATA6_N (IPR032732) - T[44-182] 1.9E-54

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPAT6_HUMAN 33.27 % 230 2.54E-69
SPA6L_HUMAN 39.264 % 133 2.15E-34