Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S11.g05606.01.t

Possible name(s)

MYL1; MYL6; MYL6B

Gene model

Harore.CG.MTP2014.S11.g05606

Location

S11 [700,058 / 705,175]

Sequences

Amino acid sequence

Length: 156

>Harore.CG.MTP2014.S11.g05606.01.p
MADFSEQMIEDVKEAFELFDKTGDTKIFYNQAGDVMRALGECPTNEDVLKFMGNPSKEDM
NTKKLSYEEFLPIFDKIIKESVKGTYEDFVEGLRVFDKDGNGTVMGAEIRHVLTTLGEKL
TSAQVGSMMQGQENSSGILNYEDFSKFLLEQPQKAL

Nucleotide sequence

Length: 945

>Harore.CG.MTP2014.S11.g05606.01.t
ATTGAGCATATTGCAGCTGTTATCTTTTATCGCCAATGCTTTCCAAATATTCCTATAAAT
ATTTGATCTGATTCCATGTAGACATCAAACAGCTCTTCCTATTCATCAAGAAAATTCATA
TCTCGGACACAAGAAACTTCAAATCTCGCTCGAAATGAATCATATTCGAGATTCCATTAT
AGCAACAACAACTTCAGTGTTCCAATATCCATTAAAAAAATTTGAATATCTGCAAAAGAA
TGGCCGACTTCAGTGAACAAATGATTGAAGATGTCAAAGAAGCTTTCGAGCTTTTCGACA
AAACCGGTGACACAAAAATCTTTTACAATCAAGCTGGTGATGTGATGAGAGCTCTAGGAG
AATGTCCGACCAACGAAGATGTATTGAAGTTTATGGGAAATCCCAGCAAAGAAGATATGA
ACACTAAAAAATTGTCCTATGAAGAATTCCTTCCAATCTTCGACAAAATCATCAAAGAAT
CCGTCAAAGGAACTTACGAAGATTTTGTTGAAGGATTGAGAGTTTTTGATAAAGACGGAA
ACGGTACAGTTATGGGAGCTGAAATTAGACACGTCCTCACAACTCTTGGTGAAAAACTCA
CATCAGCCCAAGTCGGCTCCATGATGCAAGGACAAGAAAATTCGAGTGGAATTCTCAACT
ACGAAGATTTCAGCAAATTCTTGTTGGAACAACCACAAAAAGCATTGTAAATTTGGATCC
GTCTATCAAATATTTATTTATATTATTTTGTGTGGAAGGGATAGTATCAAGATTTCAACA
AAATATTTTGTTAAGCTATAAGCGCCCATTAGTTCGTGTTCATTACTGAATAATATAATT
TTAAAACGTGGAATTTCATTTTTTTAAAAGTCATTTGATCTATAGTTATCGTTTGTCTCT
TCCGTCTTCTCTATCTTTTAACTATATCCCGTTCTCTGTAATTCT

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[4-148] 2.05E-32
ProSiteProfiles	EF_hand_dom (IPR002048) - T[7-42] 10.58 - T[84-119] 10.915 - T[134-154] 5.28
SMART	EF_hand_dom (IPR002048) - T[11-39] 1.9 - T[88-116] 3.0

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MYL6_HUMAN	59.06 %	190	2.85E-63
MYL6B_HUMAN	54.422 %	181	7.52E-59
MYL1_HUMAN	57.143 %	181	9.79E-59