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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.390.v1...' > 
  2. Clone 'ma155p23' > 
  3. Clone 'cien145235' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S11.g10443.01.t

Possible name(s)

DLG2; SYNJ2BP; SYNJ2BP-COX16

Gene model

Harore.CG.MTP2014.S11.g10443

Location

S11 [87,171 / 87,843]

Sequences

Amino acid sequence

Length: 199

>Harore.CG.MTP2014.S11.g10443.01.p
MNESDIRNVVLNRGTQGLGFNIRGGKDQPHLVNDDGIFVTKIRGNGAAAIDGTLQEGDKI
LEINGNSMEDLEHQQAVDLFLNAGDEVKLKIWSGAENRLLEIQTEDEEKTGSTNKKMVIS
IVVVTIGCFVLFYHRKDLHKFFTKLTERKLDQFLRWNFFLNQNQAMNCLNSFQTHLLNLR
IKLYMSYVMSSLFPLSNCI

Nucleotide sequence

Length: 600

>Harore.CG.MTP2014.S11.g10443.01.t
ATGAACGAGTCAGATATCCGTAATGTCGTGCTCAACCGAGGCACACAGGGTCTTGGCTTC
AACATAAGAGGGGGCAAAGACCAGCCACACTTGGTGAACGACGATGGCATATTTGTAACG
AAAATTAGGGGAAACGGCGCCGCTGCAATCGACGGGACGCTGCAGGAAGGGGATAAAATA
TTGGAGATCAACGGAAATAGCATGGAGGATTTAGAGCATCAGCAAGCTGTAGATTTATTT
CTGAACGCTGGTGACGAAGTTAAGTTGAAAATTTGGAGCGGAGCTGAAAATAGGCTGTTG
GAAATACAAACTGAAGATGAAGAAAAAACAGGCAGTACGAACAAAAAAATGGTCATTTCA
ATTGTTGTTGTCACTATAGGATGTTTTGTACTATTTTATCACCGGAAAGATCTACATAAA
TTCTTCACAAAATTAACCGAACGTAAACTTGACCAGTTTTTGAGATGGAATTTTTTTCTC
AATCAAAACCAGGCTATGAATTGCCTTAATTCATTTCAAACACATTTACTTAATTTAAGA
ATCAAATTATACATGTCATATGTCATGTCATCACTTTTTCCCCTTTCTAATTGTATTTAG

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[3-99] 2.5E-27
ProSiteProfiles
PDZ (IPR001478) - T[8-91] 21.973
Pfam
PDZ (IPR001478) - T[9-92] 2.4E-20
SMART
PDZ (IPR001478) - T[16-95] 2.6E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLG2_HUMAN 43.82 % 79.7 1.43E-17
DLG1_HUMAN 45.783 % 77.8 8.51E-17
SYJ2B_HUMAN 47.934 % 103 1.92E-28