- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S121.g04722.02.t
Possible name(s)
SYT1; SYT2; SYT5
Gene model
Location
S121 [4,505 / 8,054]
Amino acid sequence
Length: 414
>Harore.CG.MTP2014.S121.g04722.02.p
MSRLFKRAAADANSTGDDTPSPAADANPVTADVPAQSATEGSESIEEKLPPALQNIYNAI
PSWAWILIAIGAGLILLCILYCCCKRCCCKKKKKKAEKKGLKNAIDLQAVKSLGNSYKEK
VQPDVEDLDNGQEKEEEERKLGKLQFSLDYDFQQNTLTVGVIQAADLPGMDMSGTSDPYV
KVYLLPDKKKKYETKVHRKTLNPVFNETFNFKVNYNEIGEKTLVFAVYDFDRFSRHDIIG
EVRIQMNQVDLGSVLEEWRDLVNAENDKENEKLGDICFSLRYVPTAGKLTVVILESKNLK
KMDVGGLSDPYVKITLMQGGKRLKKKKTTIKKNTLNPYFNESFSFEVPFEQIQKVTLAVT
VLDYDRMGKNDVIGRLILGCNGTGAELRHWSDMLASPRRPIAQWHTLQPIEENN
Nucleotide sequence
Length: 2,613
>Harore.CG.MTP2014.S121.g04722.02.t
AGTTAGGCACTGTAAGCAACATATTACACCAATCTTAAAAGCGGTTGCCTCATTTAAAAT
AGTTGTTTGAGGTGGGCAGAAAATGTCTAGGCTTTTTAAGAGAGCAGCAGCAGATGCTAA
TAGTACAGGTGATGATACACCTTCTCCTGCTGCAGATGCTAATCCAGTGACAGCTGATGT
GCCAGCACAATCTGCTACCGAAGGTTCAGAGAGCATTGAAGAAAAGTTGCCACCAGCTTT
ACAAAACATCTACAATGCAATTCCATCATGGGCATGGATATTGATAGCTATCGGTGCCGG
CCTAATTTTGCTTTGTATCTTGTACTGTTGTTGCAAACGGTGTTGCTGTAAGAAAAAGAA
AAAGAAAGCAGAAAAGAAAGGCCTAAAGAATGCAATTGATTTGCAAGCGGTCAAGAGTTT
GGGAAACAGTTATAAAGAAAAGGTTCAGCCGGATGTTGAAGACTTAGATAATGGTCAAGA
AAAAGAGGAAGAGGAAAGGAAATTGGGAAAACTTCAGTTCTCCTTGGATTATGATTTTCA
GCAAAATACTCTGACTGTCGGTGTCATTCAAGCAGCTGATTTGCCTGGTATGGACATGTC
AGGCACTTCAGATCCATATGTTAAGGTCTACCTTTTGCCAGACAAGAAAAAGAAATACGA
AACGAAAGTGCACAGGAAGACTCTTAACCCAGTCTTTAATGAAACCTTCAATTTTAAGGT
AAACTACAACGAGATAGGAGAGAAGACCTTGGTTTTTGCTGTGTACGATTTCGATCGCTT
CTCTCGGCATGACATCATTGGCGAGGTTCGAATTCAGATGAACCAGGTTGATCTTGGCAG
TGTCCTTGAGGAATGGAGAGACCTCGTCAATGCAGAAAACGACAAGGAAAATGAGAAGCT
TGGAGATATTTGTTTCTCACTGAGGTATGTACCAACTGCTGGTAAACTGACCGTTGTCAT
ATTAGAATCAAAGAACTTGAAAAAGATGGATGTTGGCGGATTGTCTGATCCTTATGTGAA
GATTACTTTGATGCAGGGAGGAAAACGTCTGAAGAAAAAGAAGACAACAATCAAGAAGAA
CACACTGAACCCATACTTCAACGAATCTTTCAGTTTTGAGGTTCCATTCGAACAGATTCA
GAAAGTAACACTTGCTGTAACTGTCCTTGACTATGATCGCATGGGCAAGAACGACGTTAT
CGGAAGATTGATCCTAGGATGCAATGGGACAGGTGCCGAATTGCGACATTGGTCAGACAT
GCTGGCGTCGCCGAGACGACCCATCGCCCAGTGGCACACACTTCAGCCAATCGAAGAGAA
CAATTAGTATAGTCACTCTGTAAGCTATGTAACAATATGTGTAGAGAGAAAACAGGTGTA
GACATGACTTAGGTATAGAATGTGACTAGTTTTCTAGCAGCATGCTCTTGCTCAAGTATC
CTTCGTCCTTTAAATTACTTCAAATCATTTAGCAGCTACAATATTTTACTGCAGCCTAAC
TTTTGAGATCTTTTCTCATCCTATATGAAACTTCCAAGTGTAATGTATGTATCCGTACCT
CTATTTATACACATGAAATAATTCATCACTATCTAGATACATCTAATCATGTACTGCAAC
AATTCCAGTCCTCATCTTTTCCTTTTACTCTTTTTTACATCGACCGATTACAACGGACAT
TGCAGAACGAGTTGTAATGCAATATTTTATCGTATAAATTTCAATGTTGTGTTTTAACTT
TTCTTTTCTTTGTGGGATGTTGCAATCTTGAATATATTTTTATTCCTTTAAGCAAACTCA
TTTTAACCTTAATGATTTCTATAACACTCTAGTTTAATTTCATGTGTCATGAGTTTCAAA
GTTTCCAGGTGATACTCATTTTGTGACTAAAAGTATATGTATGTGTATCACAATATTATA
CAGTGATGTTTCAATGGGTTGACAATCCTTCCATAAGAAAACAGCTAACAGTGCACATCT
TCTTCATGAATCTTGTCATGAAAAATGCAGTGAACAACCAACTTATTTCATCATTCTTAG
AAATAATAAGATGTAATGTCCCTAAGAATCATACAAGTAAATTGGTCACCTTACTGCACA
TTTGATTTATTTTAAATCAATTTTGCTGTACTAAAGTTCAATTCAGTGCAGTCTTTCAAA
CAGTTACAATACAATATTTCTTCTTACTACATTTGCACATTGTTAGGGCTCATCTTATTT
GACACTTAGCGCTTATATACTGTACTATAATATCTACTAATCCTTTATGCAGTCAATTTG
TGCTAGTAATGTATTCGTTTAGTATAGGAAGTTAATAGTTGCTAATCACTTCGCCATACA
CTATCACAAACAAACTTTTTCATTTAAATAACTTTTAAGGAACTCTTGCCGTGATTTGAT
TTCAATTCCAATGCGGTACCAACAAGCAATACCTTAGTTTCTTAACCGTTTTTCTCAACA
CTCCAGATTTTGTCATGGTTCTCAGTAATGCTTATCTGTGCATACAATATATACATAGTA
TTTCTGAAATGTTGTGTTGCTGTTACAGTTATCAATTTACAAATATTAGTGACCTTTTAG
AAAAAATACAAGGAACGCAAGGTTACGACTGGA
| PANTHER |
Synaptotagmin1/2 (IPR015428) - T[19-412] 1.3E-182 |
| Gene3D |
C2_domain_sf (IPR035892) - T[127-266] 1.1E-50 - T[267-414] 1.0E-56 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[155-243] 21.394 - T[286-377] 22.785 |
| Pfam |
C2_dom (IPR000008) - T[156-261] 2.2E-31 - T[287-391] 2.8E-24 |
| SMART |
C2_dom (IPR000008) - T[156-258] 2.9E-25 - T[288-402] 3.2E-23 |
| PRINTS |
C2_dom (IPR000008) - T[172-184] 9.2E-11 - T[199-212] 9.2E-11 - T[223-231] 9.2E-11 |
| PRINTS |
Synaptotagmin (IPR001565) - T[276-291] 2.3E-18 - T[291-304] 2.3E-18 - T[348-363] 2.3E-18 - T[368-378] 2.3E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYT2_HUMAN | 63.614 % | 454 | 3.24E-159 |
| SYT5_HUMAN | 58.824 % | 413 | 2.71E-143 |
| SYT1_HUMAN | 66.833 % | 461 | 1.22E-161 |