- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S122.g02900.01.t
Possible name(s)
ZNF235; ZNF782; ZNF835
Gene model
Location
S122 [147,720 / 162,111]
Amino acid sequence
Length: 1,086
>Harore.CG.MTP2014.S122.g02900.01.p
MDVETVPEEVRIRDLAEPRYLLSTAEPVTLGPCRSEVTENEFDLLLLGHSAAWSKNNLSV
RLETTFCKLKLEVPEEIEDMRMDTNEFSSDEDDEYQPYDSPLELWVDSASESQEHKTKTN
SKLPPSLDIKNAWYLRKKKVEEDGEWKMYCDDEGRVIAQLQNTVMKKDIQENGQLYEIEG
SLRDEMDLDKTNIFSANTGYHEPSSRCDSHKVTQNESDDSLIVLVNFNDGTDDYLNAPDT
GKLSSSGSEASYLNTRTRSESEEDSIESRPNLEIMMTGFDEKSMQSYLNINPDSENNPVK
ESEMDNIIQIHLNEYPCVKNSWYLTMPGAEGILVDDHTVVNTHILVNDLRSFLKRNSIPL
KVFSKEHLQRTQGTLSDLLNHPKDWTAMSERGREIYVKMMEFXSHPNLEQLVRALRWKLP
ARSTAEKLPQHILDCLSVGRMPSESDIAISAAIFPIDPAYLEQYCKEQIEIWNFEENILE
MNVYEDMQCELNQNENTSDLQKDEEKTVNGSVVEAGSQTDMSSLAKKTSNALKYIDRHIC
TFPGCGAILNNRACFKAHMRHHAGIRLYTCMKCDKSFNTKSNLKMHMKSHYPESKDGNVL
FSSRKTEDDGMPDNTELISNASTQTTTEKRKENLSHLKYICGVCWEGFKLRQHLQKHLCD
MHNVSKLDIFEGFTCYVCSKSMKNISTLLVHMRIHTNDRPFECKQCKTGFHTRANLHRHM
RVHTGEKPFKCPKCNATFTESKSAKVHMRKHTGEKPYKCPTCSKCFAQLSPLQMHLLIHQ
NKKPHLCELCGHSFRQKTNLQKHMLRHRGLRNHKCSQCEFAFLTKNDLQRHVLKHTGERP
YKCELCKKSFTRLIYLRDHMKRQQGPTAPKCHYCNKKFCDDNARRKHLKLHSTADESVEL
SLHHTSALTNHIHQPSKLGKISNSSTMVQVHENASPVFLSTKAIFPNEKHYIITAIQSLD
GCNEKNISDVATTASNLSDDTRSIILANNAESVILEGMNISGHHIPLTQGRISGILPQHN
ILFANDSVISSSSRSGRRMLSLAADDTDTVQIGRGNIVEESDPNMQSVVVETDDTMIIFS
KSVHGN
Nucleotide sequence
Length: 4,436
>Harore.CG.MTP2014.S122.g02900.01.t
ATGGACGTAGAGACAGTTCCAGAAGAAGTTCGAATCCGAGATCTTGCGGAGCCAAGATAC
CTGCTCTCTACCGCTGAACCAGTCACTCTCGGACCCTGCAGGTCAGAGGTCACAGAAAAT
GAATTTGATTTGCTTCTCTTAGGACATTCCGCGGCTTGGAGTAAAAATAATTTGTCTGTG
CGATTGGAAACTACTTTTTGCAAGCTGAAGTTGGAAGTACCGGAAGAAATTGAAGATATG
CGAATGGATACCAATGAGTTTTCCAGTGATGAAGATGATGAATACCAGCCCTATGATTCT
CCACTTGAGTTATGGGTAGATTCAGCTTCAGAGAGTCAAGAGCACAAAACTAAGACAAAT
TCAAAGCTTCCTCCATCACTTGACATAAAAAATGCTTGGTATTTAAGAAAAAAGAAGGTC
GAAGAGGACGGTGAGTGGAAAATGTACTGCGATGATGAAGGTCGAGTTATTGCGCAGCTA
CAGAACACCGTGATGAAGAAAGATATACAGGAAAACGGACAGTTATATGAAATAGAGGGA
TCTTTGAGAGATGAAATGGACTTGGATAAAACCAATATTTTCAGTGCAAATACAGGTTAT
CACGAACCGTCTTCTCGCTGTGACTCTCACAAAGTCACACAGAATGAATCTGATGATAGT
CTTATAGTTTTAGTCAATTTTAACGATGGTACAGATGACTATTTAAATGCTCCCGACACT
GGCAAGTTATCCTCAAGTGGATCAGAAGCTTCATATTTGAATACCAGAACCAGGTCTGAA
AGCGAAGAAGATTCGATAGAGAGTAGACCTAATTTGGAAATCATGATGACTGGATTTGAT
GAAAAATCTATGCAGTCTTATTTGAATATCAACCCTGACTCTGAAAATAATCCGGTGAAG
GAATCTGAAATGGACAACATCATTCAAATCCACCTTAACGAATACCCATGTGTGAAAAAT
AGCTGGTATTTGACTATGCCTGGAGCAGAAGGCATTCTGGTAGATGATCACACTGTTGTG
AACACTCATATACTTGTCAACGATCTCCGTTCATTTTTAAAAAGAAATTCAATTCCTCTT
AAAGTGTTTTCGAAAGAGCACCTTCAAAGAACACAGGGAACACTAAGTGACCTGTTAAAT
CATCCAAAAGATTGGACTGCTATGTCAGAACGCGGTAGAGAAATCTATGTTAAAATGATG
GAGTTCNTTTCTCATCCGAACCTTGAGCAACTTGTGAGAGCCTTGCGCTGGAAACTTCCA
GCTCGGTCAACTGCTGAAAAGCTACCCCAACACATTCTGGATTGCCTATCTGTTGGAAGA
ATGCCGTCAGAAAGCGATATTGCCATTTCTGCCGCTATCTTCCCGATAGATCCTGCATAC
CTGGAGCAATATTGCAAGGAGCAAATTGAAATTTGGAATTTCGAAGAAAACATCTTGGAA
ATGAATGTGTATGAAGATATGCAATGTGAACTCAATCAGAATGAAAACACGAGCGATTTG
CAGAAAGACGAGGAAAAAACTGTGAATGGATCGGTAGTAGAAGCTGGATCACAGACGGAT
ATGTCTTCTTTGGCAAAGAAAACAAGCAATGCACTAAAGTATATTGATCGTCATATATGC
ACATTTCCAGGCTGTGGTGCAATATTGAATAATAGAGCCTGTTTTAAAGCTCACATGCGC
CATCATGCTGGTATACGTTTATACACCTGCATGAAGTGTGATAAAAGTTTCAACACAAAA
TCAAATCTGAAAATGCACATGAAAAGTCATTACCCGGAGAGTAAAGACGGTAATGTCTTG
TTCAGTTCAAGAAAGACAGAAGATGATGGAATGCCTGACAATACTGAACTGATCAGCAAT
GCTTCTACACAGACAACCACTGAAAAACGAAAAGAAAATCTCAGTCACTTGAAATACATT
TGTGGAGTCTGCTGGGAAGGCTTCAAGTTACGACAGCACTTGCAAAAGCACCTTTGTGAC
ATGCACAATGTTTCGAAACTGGATATTTTTGAAGGTTTTACATGCTATGTTTGTTCAAAA
TCAATGAAGAATATATCTACATTACTAGTTCATATGCGTATTCACACAAACGACCGCCCA
TTTGAATGTAAACAGTGCAAAACAGGATTTCACACCAGGGCTAATCTACACCGGCATATG
CGAGTTCACACAGGAGAGAAACCATTCAAGTGTCCCAAATGCAATGCAACTTTTACGGAA
TCAAAATCTGCAAAGGTTCATATGCGTAAACATACGGGAGAAAAACCATACAAATGTCCT
ACATGTAGCAAATGCTTTGCCCAGCTCAGTCCCTTGCAAATGCATTTACTAATTCATCAA
AACAAGAAGCCTCATTTATGCGAGCTGTGCGGCCATAGCTTCAGACAAAAAACCAACCTG
CAGAAACACATGCTGAGACATCGAGGCCTGAGGAATCATAAGTGTTCGCAGTGTGAATTC
GCTTTTTTAACTAAAAATGATTTACAACGGCATGTTCTGAAGCACACTGGAGAAAGACCA
TACAAATGTGAACTGTGCAAGAAAAGCTTCACACGTCTGATCTACCTTCGTGATCATATG
AAGAGACAACAAGGCCCTACAGCACCAAAATGCCATTATTGCAATAAGAAATTTTGTGAC
GATAATGCAAGAAGGAAGCATCTTAAACTTCACAGTACTGCAGATGAATCTGTTGAACTT
TCCCTCCATCACACTTCTGCTCTGACCAATCATATTCATCAGCCTTCAAAGCTCGGAAAG
ATTTCCAACTCCTCGACTATGGTTCAAGTCCATGAAAATGCAAGTCCTGTGTTTCTGTCA
ACGAAGGCTATATTTCCCAATGAGAAGCACTACATCATAACAGCCATTCAATCTCTTGAT
GGTTGCAATGAGAAAAATATAAGTGATGTTGCCACTACAGCTAGCAATTTGTCTGACGAC
ACGAGATCGATAATCCTAGCTAATAATGCGGAGTCGGTCATACTGGAAGGAATGAATATT
TCTGGGCACCATATACCTTTAACACAGGGCAGAATTTCAGGAATTTTGCCACAGCACAAC
ATTTTGTTTGCAAATGATTCTGTAATTTCATCTTCGTCCAGATCAGGCCGAAGAATGCTT
TCACTTGCTGCTGATGACACGGACACAGTACAAATAGGCAGAGGTAACATCGTTGAAGAG
AGTGATCCCAATATGCAGTCAGTAGTTGTAGAAACGGATGATACCATGATTATTTTTTCA
AAATCTGTTCATGGCAACTAGTGCACCATACTTTAAGTGAAAATATTGATATTTCCAAAG
TAAGGAAGAGTGAGTGCTGGTGAAACCCAATCATCTAGATTCAAGACTAATAATCATGAA
TCTTTCATCTGCCTGTTCTAGCTACACCGTTTAACTGGGAACTTGAAATTTGTTAGGCAA
CTATTCATAATATGCGTAAGATTTTAGTTGCATCTGGATTCCAAAGATGTAGGATGACCT
GGATCAGGCTTGGAATAGTTTAATGACGAGCATCATTACCCGTGATAATTCTATTTATCT
ATATTCTAAGGTTTTCGAAGAGTGATATCAAAGTAAATTACTATGATAAAGGTTCCATTG
TATTATCCCTCGTATGGCGTTTTGCTCCTAGGCCAGGCTTTGAATAGTTAAATGACGTGC
ATCCTCAACTGTAGAGGCATCTGGTATTTATCATCATTTTTGAATAATTTACTGACTGCA
TTTAATCAACTATGATACATGAAACCTATAGGAAATTGATTTGTGCTATACCGAAATCCA
GGACACTTCATAACATTGATGAATGACTTCTGGAGGCACTAAGAATATCCATCACTTGAT
TATAAATTATTCCCTAATAAGTGTAGGAACGCTGGTAGCATTCCTTTAGGCGCAAAATGC
GTAATCTCATAGTTTTGTTTATGTATTTGATGTTTTAAACGTTGTCATTTAACTGTTGTA
AGGTCTGTTGTTGTTCCAGCGAGACACTATCGTTGATGTATCATTAGTTTCTAGAAGAAG
TGTTACCCTGGACTGATATACGCTACTAGCTATAAGGTATATTCTAGTTTGCCGTGAACT
CGGCTGGGTAATAATGATAACAAGACGTTCGTTCATCCATCACTAGAAATAAAGGCAATA
GCAACATTTTATGTAACAATACTGATTTTATTAACGTATGCTGTATAAAAGCAACATACG
GTACATGTGAAGGCAGTATATTTCGACCTTGGTCCTTATTCGGTAGCTATAAGTCACGAT
TTAAGTTTTTAAGCAAATAAATTCAATAGCGGAAGTTATTATTATAATACCAACGCCGTT
TTATCAACATTTGCCTGACTCTTATTGGAATAAATCACGAAAAAAAACAATCATCATCGT
TATTATCTCGTAACCGTAAAATTTTCTCTCAATAGAATTGGACCATATACAGTACG
| ProSiteProfiles |
CUT_dom (IPR003350) - T[331-418] 22.006 |
| SMART |
CUT_dom (IPR003350) - T[332-421] 4.3E-22 |
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[333-412] 2.09E-20 |
| Pfam |
CUT_dom (IPR003350) - T[339-410] 2.5E-19 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[538-567] 8.559 - T[568-595] 13.09 - T[639-667] 9.349 - T[673-700] 13.38 - T[701-728] 16.145 - T[729-756] 14.586 - T[757-784] 13.526 - T[785-812] 12.03 - T[813-840] 13.568 - T[841-868] 10.346 - T[869-896] 9.182 |
| SMART |
Znf_C2H2_type (IPR013087) - T[538-562] 0.07 - T[568-590] 2.3E-5 - T[639-662] 0.74 - T[673-695] 0.05 - T[701-723] 0.0048 - T[729-751] 0.0037 - T[757-779] 0.0069 - T[785-807] 0.0094 - T[813-835] 0.0024 - T[841-861] 5.6 - T[869-891] 2.0 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[552-593] 1.46E-9 - T[673-723] 5.87E-14 - T[710-766] 2.59E-19 - T[756-788] 1.77E-7 - T[793-850] 6.05E-17 - T[835-887] 9.13E-11 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[570-590] . - T[641-662] . - T[675-695] . - T[703-723] . - T[731-751] . - T[759-779] . - T[787-807] . - T[815-835] . - T[871-891] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN782_HUMAN | 33.811 % | 207 | 3.1E-56 |
| ZN235_HUMAN | 35.447 % | 214 | 2.89E-58 |
| ZN835_HUMAN | 33.766 % | 206 | 5.15E-57 |