- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S89....' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S124.g10763.02.t
Possible name(s)
BMP2; BMP3; GDF10
Gene model
Location
S124 [108,636 / 110,910]
Amino acid sequence
Length: 556
>Harore.CG.MTP2014.S124.g10763.02.p
MLNTCSPYDVTATVVFCSIAADPRFREKDRGRPVIIVPVVERDGETKGALGREVRNGFQP
DNRMPAFLFNLSSIPSEEELVSVEIRLDGRAKNYRSNVPSFQQDSGFGSEEANDTHPSSW
NLKIGVYKIGRVSCRGEIDCTADDILKIFIKVGRTVVINSPAIMTWSDKELVFLARKARK
LDHVMLVKFTRDPSAPNSTEELSRSSRHIKKPSENDNGQHHTSNDLPNTFTVPESERPKR
NSDRTKSLASAQPFLSEPSQFGKEFNALDLLDSEFDISRVPMLIIYSNDSRTVEATEAPQ
ISPLIWGALENVTASLTRRTRRSIDNISEMEENQLPEAAGADDTREYDPNILQTESDKRR
RPFVVKKGRAQNRQTKRINNSLSNDQTELHDNEKSRRLLMDTLKDKRRRRKNKKCEDRKG
RRRKGCRKGKKSKGKNIPPHESLEALNRAHLLCGRRSLHVDFADIGWSDWIISPNYFDAY
YCSGRCEIPHMQSMQGTSNHAIIQALIKAIGVNKEIPAPCCVPEKLMSLSVLYYDEEKNV
VLKVYRNMSVETCSCR
Nucleotide sequence
Length: 1,671
>Harore.CG.MTP2014.S124.g10763.02.t
ATGTTAAACACCTGTTCGCCATACGATGTGACAGCCACGGTGGTTTTTTGTTCTATTGCA
GCTGACCCACGTTTCCGGGAAAAGGACAGGGGACGACCAGTGATTATTGTACCTGTTGTA
GAAAGAGATGGGGAGACAAAAGGAGCCTTGGGTAGGGAAGTGAGGAATGGTTTCCAACCG
GACAACCGAATGCCCGCTTTTCTTTTCAATTTGAGTTCCATACCGAGCGAGGAAGAACTA
GTTTCTGTAGAGATACGTCTAGATGGACGAGCCAAGAATTACCGCAGCAATGTTCCCTCA
TTTCAACAAGACAGCGGTTTTGGGAGTGAAGAAGCGAACGACACGCATCCGTCCTCTTGG
AATCTAAAAATAGGAGTGTACAAAATAGGACGAGTTAGCTGTCGAGGCGAGATCGACTGC
ACTGCTGATGATATATTGAAAATTTTCATCAAAGTTGGAAGAACTGTTGTGATCAATTCG
CCAGCGATAATGACTTGGTCCGACAAAGAACTCGTATTCCTTGCTCGTAAAGCCCGTAAG
CTTGATCATGTCATGTTGGTCAAGTTTACGCGAGACCCCTCTGCGCCTAACAGCACAGAA
GAACTTTCTCGTAGTAGCAGACATATAAAGAAACCATCGGAAAATGACAATGGACAGCAT
CATACATCAAATGATCTACCTAATACATTTACCGTCCCCGAAAGCGAACGACCCAAACGG
AATAGCGATCGTACGAAATCGCTTGCTTCTGCCCAACCATTTTTATCCGAGCCTTCACAA
TTTGGAAAAGAATTCAATGCATTAGATTTACTAGATTCGGAGTTCGACATATCCCGGGTA
CCCATGCTGATAATCTATTCCAATGACTCCCGCACAGTGGAAGCAACAGAAGCTCCACAA
ATTTCACCACTCATATGGGGAGCTTTGGAGAATGTTACAGCATCTCTAACGAGAAGAACA
AGGCGTTCCATCGACAATATATCAGAAATGGAAGAAAACCAATTGCCGGAAGCGGCAGGT
GCAGACGACACTAGGGAGTACGACCCCAATATATTGCAAACAGAGTCAGACAAGAGACGG
AGGCCGTTTGTGGTAAAAAAGGGGAGAGCTCAAAATCGCCAAACGAAACGTATTAATAAC
TCTCTATCCAACGATCAAACGGAACTTCACGATAACGAAAAATCACGTCGCCTCCTAATG
GACACGTTAAAGGACAAACGTCGTCGTCGAAAAAACAAGAAATGCGAAGATCGTAAAGGG
AGACGTAGGAAGGGTTGCAGAAAGGGAAAGAAGAGCAAAGGAAAAAATATTCCACCACAC
GAATCTCTGGAAGCCCTCAATCGCGCCCATTTACTCTGCGGTCGAAGGTCGCTCCATGTT
GATTTCGCTGACATCGGTTGGTCAGATTGGATAATCTCCCCCAATTACTTCGACGCATAT
TACTGTTCTGGACGATGTGAGATACCGCATATGCAGTCCATGCAAGGAACCTCTAATCAC
GCCATTATCCAAGCTCTCATCAAAGCTATCGGGGTAAATAAAGAGATTCCAGCCCCGTGC
TGTGTTCCTGAAAAACTCATGTCTTTAAGCGTTCTGTATTATGATGAAGAAAAGAATGTT
GTTCTCAAAGTTTATAGAAATATGTCCGTAGAAACCTGCTCGTGTAGATGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[60-556] 6.2E-54 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[428-556] 35.972 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[444-556] 4.2E-36 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[449-556] 5.59E-33 |
| Pfam |
TGF-b_C (IPR001839) - T[453-555] 9.1E-32 |
| SMART |
TGF-b_C (IPR001839) - T[453-556] 2.0E-50 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[471-486] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP3_HUMAN | 34.965 % | 160 | 2.94E-43 |
| GDF10_HUMAN | 61.905 % | 152 | 2.83E-40 |
| BMP2_HUMAN | 36.181 % | 120 | 9.69E-30 |