- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S89....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S124.g10763.03.t
Possible name(s)
BMP2; BMP3; GDF10
Gene model
Location
S124 [108,636 / 113,933]
Amino acid sequence
Length: 772
>Harore.CG.MTP2014.S124.g10763.03.p
MHQSLVQIVCCLFLQYVLISADPLASEFKDLREDENEFLSGKNFTVLPLSLPIPKFLDQN
LFQSTPFPSQTHPVVVADAKNTKTVTRPGLSQKNRRRKGKRGKNGKRTKSNKASNNPRKN
SEDFDESKDLEDQKEILRSTMRYMFGFDHMLTTPEMVKQKIVAENVGGKSDGPNSGEATK
LKGQNGKEDEKLEALDLPEPPDFMLELYETYSKDNNLMMLHSRSQGDTIRSFFPSPADPR
FREKDRGRPVIIVPVVERDGETKGALGREVRNGFQPDNRMPAFLFNLSSIPSEEELVSVE
IRLDGRAKNYRSNVPSFQQDSGFGSEEANDTHPSSWNLKIGVYKIGRVSCRGEIDCTADD
ILKIFIKVGRTVVINSPAIMTWSDKELVFLARKARKLDHVMLVKFTRDPSAPNSTEELSR
SSRHIKKPSENDNGQHHTSNDLPNTFTVPESERPKRNSDRTKSLASAQPFLSEPSQFGKE
FNALDLLDSEFDISRVPMLIIYSNDSRTVEATEAPQISPLIWGALENVTASLTRRTRRSI
DNISEMEENQLPEAAGADDTREYDPNILQTESDKRRRPFVVKKGRAQNRQTKRINNSLSN
DQTELHDNEKSRRLLMDTLKDKRRRRKNKKCEDRKGRRRKGCRKGKKSKGKNIPPHESLE
ALNRAHLLCGRRSLHVDFADIGWSDWIISPNYFDAYYCSGRCEIPHMQSMQGTSNHAIIQ
ALIKAIGVNKEIPAPCCVPEKLMSLSVLYYDEEKNVVLKVYRNMSVETCSCR
Nucleotide sequence
Length: 2,319
>Harore.CG.MTP2014.S124.g10763.03.t
ATGCATCAATCTTTAGTCCAAATTGTCTGCTGCTTATTTTTACAATATGTATTAATTTCG
GCTGATCCGCTAGCATCGGAGTTTAAAGACCTTCGTGAGGATGAAAATGAGTTTTTGTCC
GGGAAAAATTTTACTGTGCTCCCGTTGTCTTTACCGATTCCGAAATTTCTTGATCAGAAC
CTATTCCAATCAACGCCCTTTCCGTCGCAAACACATCCTGTTGTTGTCGCCGATGCAAAA
AATACCAAAACAGTCACACGACCGGGATTGTCGCAGAAAAATCGACGAAGAAAAGGAAAA
CGCGGTAAAAATGGAAAGCGGACTAAGAGTAATAAAGCCTCAAACAATCCACGAAAGAAT
TCCGAAGATTTCGATGAGTCGAAAGACTTGGAGGACCAAAAAGAAATTTTACGATCTACA
ATGCGATATATGTTCGGATTTGATCACATGCTAACAACCCCTGAAATGGTTAAGCAGAAA
ATCGTTGCAGAGAACGTAGGGGGCAAATCCGACGGACCGAATAGCGGAGAAGCAACGAAA
TTGAAGGGACAAAACGGAAAAGAAGACGAGAAATTGGAAGCGCTCGATTTACCAGAACCG
CCGGATTTTATGTTAGAACTTTACGAAACCTATTCAAAAGACAACAACTTGATGATGCTT
CACTCTCGTTCACAGGGGGATACCATTCGAAGTTTCTTCCCGTCGCCAGCTGACCCACGT
TTCCGGGAAAAGGACAGGGGACGACCAGTGATTATTGTACCTGTTGTAGAAAGAGATGGG
GAGACAAAAGGAGCCTTGGGTAGGGAAGTGAGGAATGGTTTCCAACCGGACAACCGAATG
CCCGCTTTTCTTTTCAATTTGAGTTCCATACCGAGCGAGGAAGAACTAGTTTCTGTAGAG
ATACGTCTAGATGGACGAGCCAAGAATTACCGCAGCAATGTTCCCTCATTTCAACAAGAC
AGCGGTTTTGGGAGTGAAGAAGCGAACGACACGCATCCGTCCTCTTGGAATCTAAAAATA
GGAGTGTACAAAATAGGACGAGTTAGCTGTCGAGGCGAGATCGACTGCACTGCTGATGAT
ATATTGAAAATTTTCATCAAAGTTGGAAGAACTGTTGTGATCAATTCGCCAGCGATAATG
ACTTGGTCCGACAAAGAACTCGTATTCCTTGCTCGTAAAGCCCGTAAGCTTGATCATGTC
ATGTTGGTCAAGTTTACGCGAGACCCCTCTGCGCCTAACAGCACAGAAGAACTTTCTCGT
AGTAGCAGACATATAAAGAAACCATCGGAAAATGACAATGGACAGCATCATACATCAAAT
GATCTACCTAATACATTTACCGTCCCCGAAAGCGAACGACCCAAACGGAATAGCGATCGT
ACGAAATCGCTTGCTTCTGCCCAACCATTTTTATCCGAGCCTTCACAATTTGGAAAAGAA
TTCAATGCATTAGATTTACTAGATTCGGAGTTCGACATATCCCGGGTACCCATGCTGATA
ATCTATTCCAATGACTCCCGCACAGTGGAAGCAACAGAAGCTCCACAAATTTCACCACTC
ATATGGGGAGCTTTGGAGAATGTTACAGCATCTCTAACGAGAAGAACAAGGCGTTCCATC
GACAATATATCAGAAATGGAAGAAAACCAATTGCCGGAAGCGGCAGGTGCAGACGACACT
AGGGAGTACGACCCCAATATATTGCAAACAGAGTCAGACAAGAGACGGAGGCCGTTTGTG
GTAAAAAAGGGGAGAGCTCAAAATCGCCAAACGAAACGTATTAATAACTCTCTATCCAAC
GATCAAACGGAACTTCACGATAACGAAAAATCACGTCGCCTCCTAATGGACACGTTAAAG
GACAAACGTCGTCGTCGAAAAAACAAGAAATGCGAAGATCGTAAAGGGAGACGTAGGAAG
GGTTGCAGAAAGGGAAAGAAGAGCAAAGGAAAAAATATTCCACCACACGAATCTCTGGAA
GCCCTCAATCGCGCCCATTTACTCTGCGGTCGAAGGTCGCTCCATGTTGATTTCGCTGAC
ATCGGTTGGTCAGATTGGATAATCTCCCCCAATTACTTCGACGCATATTACTGTTCTGGA
CGATGTGAGATACCGCATATGCAGTCCATGCAAGGAACCTCTAATCACGCCATTATCCAA
GCTCTCATCAAAGCTATCGGGGTAAATAAAGAGATTCCAGCCCCGTGCTGTGTTCCTGAA
AAACTCATGTCTTTAAGCGTTCTGTATTATGATGAAGAAAAGAATGTTGTTCTCAAAGTT
TATAGAAATATGTCCGTAGAAACCTGCTCGTGTAGATGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[121-772] 2.6E-58 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[197-346] 2.0E-4 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[644-772] 35.972 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[660-772] 6.9E-36 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[665-772] 9.46E-33 |
| SMART |
TGF-b_C (IPR001839) - T[669-772] 2.0E-50 |
| Pfam |
TGF-b_C (IPR001839) - T[669-771] 1.5E-31 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[687-702] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP3_HUMAN | 34.965 % | 160 | 1.98E-42 |
| GDF10_HUMAN | 61.905 % | 153 | 6.51E-40 |
| BMP2_HUMAN | 36.181 % | 121 | 1.87E-29 |