- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S124.g12591.01.t
Possible name(s)
PTF1A; TWIST1; TWIST2
Gene model
Location
S124 [155,862 / 156,889]
Amino acid sequence
Length: 259
>Harore.CG.MTP2014.S124.g12591.01.p
MVLIENIISESESKSPLNTKRKYENHAEEFCEEAKENFGIQKKKRRRPNAAVRERERLKV
FNDALDNLQGVIPVRLPAGRKLHKKQTLQLAMRYIQFLRGCLDGRHDWNDRSRFLWCSGS
QQEDFITAIDAAAAAAAVSSTKIQEKQDQNVWASSPTGSIESRSSSIDYSCDSTDNSQFP
SPDSAEFLIHSVPKESLLDFSTHGMLTYDSYLEPCAEAIYKMTSSSTVTYCYDIHDLDEV
LNDLKEITPNLFALQNEKN
Nucleotide sequence
Length: 780
>Harore.CG.MTP2014.S124.g12591.01.t
ATGGTTCTAATCGAAAACATCATTTCAGAGAGTGAGTCAAAATCGCCATTGAATACGAAA
CGAAAATACGAAAATCACGCGGAAGAGTTCTGTGAGGAGGCGAAAGAAAACTTCGGAATT
CAAAAAAAGAAACGCAGGAGACCGAACGCAGCTGTACGAGAGCGGGAAAGATTGAAAGTT
TTCAACGACGCTCTGGACAATTTACAAGGTGTCATTCCGGTCCGGTTGCCCGCTGGAAGA
AAACTTCATAAAAAGCAAACACTTCAACTTGCAATGCGATACATTCAATTTCTGCGGGGT
TGTCTTGACGGAAGACACGATTGGAACGACAGATCGCGTTTTCTTTGGTGCTCGGGTTCG
CAACAAGAGGATTTCATAACTGCGATCGATGCAGCAGCGGCTGCTGCTGCTGTATCATCC
ACAAAAATACAAGAAAAACAAGATCAAAATGTATGGGCATCGTCTCCTACCGGTTCTATA
GAATCTAGATCAAGTTCCATCGACTACAGTTGCGATAGCACAGACAATTCTCAATTTCCA
AGTCCAGACAGCGCAGAATTTTTAATTCACTCAGTCCCAAAAGAAAGTTTATTGGATTTT
TCTACGCATGGAATGTTAACGTACGATAGCTACCTAGAACCATGCGCAGAAGCTATCTAC
AAAATGACGTCATCAAGTACCGTGACGTATTGTTACGATATACATGATTTGGACGAGGTA
CTGAACGATTTGAAAGAGATTACACCGAACCTTTTTGCATTACAGAACGAGAAAAATTAG
| PANTHER |
Twist-related (IPR015789) - T[11-178] 9.8E-38 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[40-108] 1.5E-15 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[42-113] 1.44E-12 |
| CDD |
bHLH_dom (IPR011598) - T[43-99] 9.87042E-8 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[45-98] 12.354 |
| Pfam |
bHLH_dom (IPR011598) - T[46-98] 3.1E-9 |
| SMART |
bHLH_dom (IPR011598) - T[51-104] 3.7E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|