- Clone 'cilv006o06' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S125.g08319.01.t
Possible name(s)
PITX1; PITX2; PITX3
Gene model
Location
S125 [206,297 / 211,453]
Amino acid sequence
Length: 608
>Harore.CG.MTP2014.S125.g08319.01.p
MDYRPDGFFSPAAAAAAVAAHQHYHHYSNHSHQAAMAGSTYGYHTQYPHAHHPYYNNGYM
GGFSSGAGSDVGALFGGSPSTSPNSNTTNPNNSPLSTSLSLLPGSPPVSSNSLSTSPMAT
SSVLTPFSLATRYGNGRQWLNGSCMENQIHHKSVTSNPAFYNGSGLASLVAQAAALPPSV
SFDDPPTASCNGGKALNNYNHDSNTARSSCSRKTEENRYHHASVELCNDEASKNSKLNTN
NAAADRGQCTERTGKNSHQSEIRQEKYFPSCYEANNDVEVSATATTNNRRSKYPTVAEVV
SDSADATMDSSPPSCGVSSDTNSRDEDMDKGNSKRQVDSLEPSQFGRVNITATAETSEPK
KKPTEGEDGDTKGEGGATENSQSDDPDGEGKNKRRQRRQRTHFTSHQLQELETVFAHNRY
PDMSTREHISQYTTLSEQRVRVWFKNRRAKWRKRERNQMTDYKNFPFNGIMPGYDEMYGY
PTYNWPKMASPLSTKPYPWGLNSALNSMGSLTTQPLGFSQNSSVATSVIPNMNSALGSMG
PGSASNPTHYAGAANPYNSYGLRATTDPCNSSIASLRLKAKQHTDYIGYPTVLEPPLAAC
QYNAHKNI
Nucleotide sequence
Length: 1,827
>Harore.CG.MTP2014.S125.g08319.01.t
ATGGATTATAGGCCAGATGGGTTTTTCTCACCAGCGGCGGCCGCAGCCGCCGTTGCTGCC
CATCAGCACTATCATCATTATTCGAATCATTCCCATCAGGCTGCCATGGCCGGGTCGACC
TACGGCTACCATACACAGTATCCTCACGCCCATCATCCCTACTACAACAACGGTTACATG
GGAGGGTTCTCGAGCGGTGCCGGAAGCGACGTGGGTGCCCTATTCGGAGGATCCCCTTCA
ACTTCACCCAATTCCAACACAACGAACCCTAACAATTCTCCACTTTCTACTTCCCTATCT
CTACTGCCCGGTTCCCCTCCCGTTTCTTCAAATTCACTCTCGACATCACCGATGGCAACG
TCTTCCGTGTTGACGCCCTTTTCCTTAGCCACTCGGTACGGAAACGGGCGGCAGTGGCTC
AATGGGTCTTGCATGGAAAACCAAATACACCATAAATCTGTCACATCCAACCCAGCATTT
TATAACGGCAGTGGCTTGGCTTCCCTGGTAGCCCAGGCCGCGGCTTTACCCCCTTCCGTG
AGTTTTGACGATCCGCCAACGGCTTCGTGCAATGGTGGCAAAGCGTTGAACAATTATAAT
CACGATTCAAATACTGCAAGAAGTAGCTGTAGTAGAAAAACGGAAGAAAATCGTTATCAT
CACGCCTCGGTTGAACTTTGCAATGACGAAGCTAGCAAAAATTCGAAATTGAATACGAAT
AACGCCGCCGCTGACCGAGGTCAGTGTACGGAACGGACTGGAAAAAATTCGCACCAAAGC
GAAATACGTCAGGAAAAATATTTCCCTTCTTGTTACGAAGCTAATAACGACGTCGAAGTG
TCGGCCACCGCAACGACGAATAATCGTCGTTCAAAATATCCGACGGTGGCAGAAGTCGTG
AGCGATTCTGCGGACGCAACAATGGATTCATCTCCGCCGAGTTGCGGCGTGTCCTCGGAC
ACGAATTCGCGAGATGAAGATATGGATAAAGGCAATTCAAAGCGTCAAGTCGATTCCCTC
GAGCCGAGTCAGTTTGGCAGAGTGAATATTACGGCAACTGCCGAAACGAGCGAGCCGAAA
AAAAAACCGACCGAAGGCGAAGACGGCGATACAAAAGGCGAGGGTGGCGCTACGGAAAAT
TCGCAGAGTGACGATCCCGATGGAGAGGGGAAAAACAAAAGACGACAGCGACGACAAAGA
ACACACTTTACGTCACATCAGCTCCAGGAACTCGAAACTGTATTTGCTCATAACAGATAC
CCTGACATGTCAACAAGAGAGCATATATCGCAGTACACCACCCTGTCAGAGCAACGAGTT
CGGGTTTGGTTCAAAAATCGTCGAGCAAAATGGCGAAAGAGGGAACGCAACCAGATGACC
GACTACAAAAACTTCCCTTTCAACGGAATCATGCCCGGATACGACGAGATGTACGGTTAT
CCAACCTATAACTGGCCAAAAATGGCGTCCCCACTCAGCACCAAGCCTTACCCTTGGGGA
CTTAATTCGGCTTTGAATAGCATGGGGTCACTTACCACTCAGCCGCTCGGGTTCAGTCAG
AACTCATCTGTTGCAACCTCCGTGATACCCAACATGAACAGCGCCCTGGGTTCTATGGGG
CCTGGGTCAGCGTCTAACCCGACGCATTATGCAGGTGCTGCTAATCCCTATAACAGCTAT
GGATTACGGGCCACCACGGATCCTTGTAATTCAAGCATAGCGTCCTTACGGTTGAAGGCG
AAGCAACACACAGATTACATCGGCTACCCTACTGTTTTGGAACCTCCACTAGCTGCTTGC
CAGTATAACGCTCACAAAAATATCTAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[382-456] 9.41E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[394-454] 20.471 |
| SMART |
Homeobox_dom (IPR001356) - T[396-458] 3.4E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[397-453] 5.0E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[401-455] 7.68672E-21 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[429-452] . |
| Pfam |
OAR_dom (IPR003654) - T[567-584] 1.4E-9 |
| ProSiteProfiles |
OAR_dom (IPR003654) - T[571-584] 11.954 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PITX3_HUMAN | 44.484 % | 197 | 1.67E-58 |
| PITX2_HUMAN | 41.391 % | 171 | 2.68E-48 |
| PITX1_HUMAN | 40.55 % | 172 | 4.76E-49 |