- EST 'AHC0AAA226YJ02_RM1' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S125.g15875.01.t
Possible name(s)
ABCB11; ABCB6; ABCB7
Gene model
Location
S125 [113,787 / 119,700]
Amino acid sequence
Length: 650
>Harore.CG.MTP2014.S125.g15875.01.p
MTFLKHIHKSCFSKIMSRQAAAHRKETFVFIPITHHCSLGASTSTNFLKSFIFTKSFSRK
LWATWRPIRPLIRTNTRQQIPGSSSAVGNIKGIETTSVGTKKILKFMFSYIWPSDKPEVK
RRVVISLSLLASAKLINVQVPFLFKHIIDNISTFSLTSPEAATFTAVYCLILGCKYSRVY
GAARISAALFNELRDAVFAKVAQRSIREIACKLFNHLHSLDMRFHMSRQTGALSKAIDRG
TRGINFIFRALVFNIVPTLFEVTLVSSILWYKCGGQFTLVTLGTLAAFSAWTLSITAWRT
KFRQRMNQADSQMGNLAVDSLLNYETVKYFNNEAFETKRYDEVLANYEDANLRTNTSLAL
LNFGTLTVGDLVMVNGLLFQLSVPLNFLGSVYRDIRQSLIDMATMFALTEIKREVTNHPN
AHVLNIQKNDVSIRFENVKFGYGKDQTILNGLSFEVEPGKKVAIVGGSGSGKTTIARLLY
RFYDPLEGNIFINNQDIKLVTLESLRKSIGIVPQETVLFHDTIYHNISYGDLLADEEQVF
DAARMADIHDSILSMPKQYKTEARERGLKLSGGEKQRVAIARAVLKNPAIVLYDEATSSL
DSITEQGKVVQRGTHHQLIEDPNSLYTHLWESQNQTAYQNSVSEDDSNLQ
Nucleotide sequence
Length: 2,414
>Harore.CG.MTP2014.S125.g15875.01.t
GCCACATTTTGAAGTTGATTCTGAATAATCGCACTCTACTACGAGAAGTATTTAGCTCGA
CTGCATGCAAAAATAACCACCATACAATAAATGACGTTTTTAAAGCACATCCACAAATCA
TGCTTCAGCAAAATAATGTCTCGACAGGCGGCGGCTCACCGAAAAGAAACATTTGTTTTC
ATTCCAATAACTCATCACTGTAGTCTTGGGGCATCTACTTCCACAAACTTTCTGAAATCG
TTCATATTCACGAAATCATTTTCTCGTAAATTGTGGGCGACATGGAGGCCGATCCGTCCA
TTAATCAGAACAAACACACGCCAGCAAATTCCAGGCTCATCTTCTGCTGTTGGTAATATC
AAAGGCATTGAAACAACTTCAGTAGGAACAAAAAAGATTTTAAAATTCATGTTCTCCTAT
ATATGGCCTTCGGACAAACCAGAAGTAAAGAGGAGAGTCGTGATATCTTTGTCATTGCTG
GCATCTGCAAAACTAATAAATGTACAGGTTCCGTTTCTTTTCAAGCACATCATTGACAAC
ATATCTACATTCAGCCTGACTTCACCCGAAGCAGCTACATTCACAGCGGTGTATTGCCTT
ATATTAGGATGTAAGTACAGTAGAGTATATGGTGCTGCACGAATAAGCGCCGCATTATTT
AATGAACTGCGTGATGCGGTTTTTGCCAAAGTTGCTCAGAGATCTATCCGGGAAATTGCT
TGCAAGCTCTTCAATCACCTACATTCTTTGGACATGCGTTTTCACATGTCGAGGCAAACT
GGAGCATTGTCAAAAGCGATTGACCGCGGAACAAGGGGGATAAACTTCATTTTCAGAGCC
TTAGTTTTCAACATTGTTCCAACTTTGTTCGAAGTTACGCTTGTAAGCAGTATATTGTGG
TATAAGTGCGGTGGCCAGTTTACTCTGGTTACACTAGGAACCTTGGCTGCCTTCAGTGCT
TGGACGCTATCCATCACAGCCTGGCGAACGAAATTCCGGCAGCGAATGAACCAGGCCGAC
AGTCAGATGGGAAACTTGGCTGTAGATTCATTACTAAATTATGAAACTGTAAAGTATTTT
AACAACGAGGCGTTCGAGACTAAAAGATACGATGAAGTACTCGCAAATTATGAAGATGCA
AATCTGCGTACAAATACCTCTTTGGCTCTGTTAAACTTTGGAACGTTAACTGTTGGGGAC
CTGGTCATGGTCAACGGTTTGCTATTCCAGTTGTCTGTGCCTCTAAATTTTCTTGGCTCT
GTCTACCGGGACATCAGGCAGTCTTTGATCGACATGGCAACCATGTTTGCTCTCACTGAA
ATCAAACGTGAAGTAACAAATCATCCGAATGCCCACGTTCTAAATATACAGAAAAATGAT
GTGTCAATTAGATTCGAAAATGTCAAATTTGGATATGGCAAAGACCAAACAATTCTGAAC
GGTCTCAGCTTTGAGGTTGAACCTGGCAAAAAAGTAGCAATTGTCGGGGGAAGTGGTAGT
GGTAAGACTACTATTGCAAGACTACTGTACAGGTTTTATGACCCATTGGAAGGGAATATT
TTCATAAACAATCAAGACATCAAACTGGTCACTTTGGAAAGTCTGAGAAAATCAATTGGC
ATAGTTCCTCAGGAAACAGTGCTCTTTCATGACACAATATACCATAATATCTCCTATGGG
GATTTATTGGCAGACGAGGAGCAAGTGTTTGATGCAGCGAGAATGGCAGATATTCATGAT
TCCATATTGTCCATGCCAAAGCAGTACAAAACAGAGGCAAGAGAAAGAGGCTTGAAACTA
TCCGGAGGAGAGAAACAAAGAGTTGCTATCGCCCGAGCTGTACTGAAAAACCCTGCAATA
GTTTTATATGACGAAGCTACCTCTTCATTAGATTCAATTACAGAGCAGGGAAAAGTCGTG
CAACGCGGCACCCACCATCAACTTATCGAAGATCCGAATTCCTTGTACACGCACTTGTGG
GAGAGCCAGAACCAGACCGCTTATCAGAACAGCGTATCGGAAGATGATTCCAATTTGCAA
TAACATGCCTAAATATATGAGATTGTTTCTCTTCAAATGCTCTTACCGCTCATTACTTTT
AAGTACAAACTCCTGAAGATTCATAGAAAGCTTTTGTTGTCATTCTCATATGTGGGTCGG
TACCTATCAGTATGATGTTGCATAGGTCTTGAAGAAAATATTAGGAATTTAAAATGATGT
TCTTGGCAGTTAATAAGATATTGGTGGATATGAATATATATTCATCTACAGCATTTACTT
GTGTATAATTCTCACTCAAGCATAACTCGCATCTCATATTTTGACTTGGAAAGTTGGTAT
GAAACTTTCATGATCGAAATTTACATTAACTTCATGCCTAAAGTAGCCCCGTTTTTTAAT
TGTAGTTGGGTAAA
| Gene3D |
ABC1_TM_sf (IPR036640) - T[110-420] 6.0E-112 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[111-403] 9.42E-48 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[124-397] 29.662 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[124-374] 2.8E-30 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[425-633] 3.25E-66 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[433-631] 16.907 |
| Pfam |
ABC_transporter-like (IPR003439) - T[449-598] 5.3E-34 |
| SMART |
AAA+_ATPase (IPR003593) - T[458-636] 5.8E-12 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[570-584] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB8_HUMAN | 29.31 % | 175 | 2.15E-46 |
| ABCB6_HUMAN | 37.313 % | 384 | 6.85E-123 |
| ABCB7_HUMAN | 51.913 % | 641 | 0 |