- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C2.288.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S125.g15875.02.t
Possible name(s)
ABCB11; ABCB6; ABCB7
Gene model
Location
S125 [113,922 / 119,329]
Amino acid sequence
Length: 688
>Harore.CG.MTP2014.S125.g15875.02.p
MSRQAAAHRKETFVFIPITHHCSLGASTSTNFLKSFIFTKSFSRKLWATWRPIRPLIRTN
TRQQIPGSSSAVGNIKGIETTSVGTKKILKFMFSYIWPSDKPEVKRRVVISLSLLASAKL
INVQVPFLFKHIIDNISTFSLTSPEAATFTAVYCLILGYGAARISAALFNELRDAVFAKV
AQRSIREIACKLFNHLHSLDMRFHMSRQTGALSKAIDRGTRGINFIFRALVFNIVPTLFE
VTLVSSILWYKCGGQFTLVTLGTLAAFSAWTLSITAWRTKFRQRMNQADSQMGNLAVDSL
LNYETVKYFNNEAFETKRYDEVLANYEDANLRTNTSLALLNFGQHFIFGFGLTAIMCLAA
QGVKQGTLTVGDLVMVNGLLFQLSVPLNFLGSVYRDIRQSLIDMATMFALTEIKREVTNH
PNAHVLNIQKNDVSIRFENVKFGYGKDQTILNGLSFEVEPGKKVAIVGGSGSGKTTIARL
LYRFYDPLEGNIFINNQDIKLVTLESLRKSIGIVPQETVLFHDTIYHNISYGDLLADEEQ
VFDAARMADIHDSILSMPKQYKTEARERGLKLSGGEKQRVAIARAVLKNPAIVLYDEATS
SLDSITEQNILKALRRVTINRTSIFIAHRLSTVMDCDEIIVLHEGKVVQRGTHHQLIEDP
NSLYTHLWESQNQTAYQNSVSEDDSNLQ
Nucleotide sequence
Length: 2,067
>Harore.CG.MTP2014.S125.g15875.02.t
ATGTCTCGACAGGCGGCGGCTCACCGAAAAGAAACATTTGTTTTCATTCCAATAACTCAT
CACTGTAGTCTTGGGGCATCTACTTCCACAAACTTTCTGAAATCGTTCATATTCACGAAA
TCATTTTCTCGTAAATTGTGGGCGACATGGAGGCCGATCCGTCCATTAATCAGAACAAAC
ACACGCCAGCAAATTCCAGGCTCATCTTCTGCTGTTGGTAATATCAAAGGCATTGAAACA
ACTTCAGTAGGAACAAAAAAGATTTTAAAATTCATGTTCTCCTATATATGGCCTTCGGAC
AAACCAGAAGTAAAGAGGAGAGTCGTGATATCTTTGTCATTGCTGGCATCTGCAAAACTA
ATAAATGTACAGGTTCCGTTTCTTTTCAAGCACATCATTGACAACATATCTACATTCAGC
CTGACTTCACCCGAAGCAGCTACATTCACAGCGGTGTATTGCCTTATATTAGGATATGGT
GCTGCACGAATAAGCGCCGCATTATTTAATGAACTGCGTGATGCGGTTTTTGCCAAAGTT
GCTCAGAGATCTATCCGGGAAATTGCTTGCAAGCTCTTCAATCACCTACATTCTTTGGAC
ATGCGTTTTCACATGTCGAGGCAAACTGGAGCATTGTCAAAAGCGATTGACCGCGGAACA
AGGGGGATAAACTTCATTTTCAGAGCCTTAGTTTTCAACATTGTTCCAACTTTGTTCGAA
GTTACGCTTGTAAGCAGTATATTGTGGTATAAGTGCGGTGGCCAGTTTACTCTGGTTACA
CTAGGAACCTTGGCTGCCTTCAGTGCTTGGACGCTATCCATCACAGCCTGGCGAACGAAA
TTCCGGCAGCGAATGAACCAGGCCGACAGTCAGATGGGAAACTTGGCTGTAGATTCATTA
CTAAATTATGAAACTGTAAAGTATTTTAACAACGAGGCGTTCGAGACTAAAAGATACGAT
GAAGTACTCGCAAATTATGAAGATGCAAATCTGCGTACAAATACCTCTTTGGCTCTGTTA
AACTTTGGTCAGCATTTCATATTTGGATTTGGCCTAACTGCTATCATGTGTCTTGCTGCG
CAGGGAGTAAAGCAAGGAACGTTAACTGTTGGGGACCTGGTCATGGTCAACGGTTTGCTA
TTCCAGTTGTCTGTGCCTCTAAATTTTCTTGGCTCTGTCTACCGGGACATCAGGCAGTCT
TTGATCGACATGGCAACCATGTTTGCTCTCACTGAAATCAAACGTGAAGTAACAAATCAT
CCGAATGCCCACGTTCTAAATATACAGAAAAATGATGTGTCAATTAGATTCGAAAATGTC
AAATTTGGATATGGCAAAGACCAAACAATTCTGAACGGTCTCAGCTTTGAGGTTGAACCT
GGCAAAAAAGTAGCAATTGTCGGGGGAAGTGGTAGTGGTAAGACTACTATTGCAAGACTA
CTGTACAGGTTTTATGACCCATTGGAAGGGAATATTTTCATAAACAATCAAGACATCAAA
CTGGTCACTTTGGAAAGTCTGAGAAAATCAATTGGCATAGTTCCTCAGGAAACAGTGCTC
TTTCATGACACAATATACCATAATATCTCCTATGGGGATTTATTGGCAGACGAGGAGCAA
GTGTTTGATGCAGCGAGAATGGCAGATATTCATGATTCCATATTGTCCATGCCAAAGCAG
TACAAAACAGAGGCAAGAGAAAGAGGCTTGAAACTATCCGGAGGAGAGAAACAAAGAGTT
GCTATCGCCCGAGCTGTACTGAAAAACCCTGCAATAGTTTTATATGACGAAGCTACCTCT
TCATTAGATTCAATTACAGAGCAGAACATTTTGAAAGCCTTAAGAAGAGTTACAATCAAC
AGAACCTCTATATTCATCGCTCACAGGCTTTCTACTGTCATGGATTGTGATGAAATTATA
GTTTTGCATGAGGGAAAAGTCGTGCAACGCGGCACCCACCATCAACTTATCGAAGATCCG
AATTCCTTGTACACGCACTTGTGGGAGAGCCAGAACCAGACCGCTTATCAGAACAGCGTA
TCGGAAGATGATTCCAATTTGCAATAA
| Gene3D |
ABC1_TM_sf (IPR036640) - T[95-422] 2.7E-132 |
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[96-405] 2.75E-58 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[109-399] 41.772 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[109-386] 7.2E-39 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[427-671] 1.47E-84 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[435-669] 24.37 |
| Pfam |
ABC_transporter-like (IPR003439) - T[451-600] 5.8E-34 |
| SMART |
AAA+_ATPase (IPR003593) - T[460-645] 2.7E-14 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[572-586] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB8_HUMAN | 31.053 % | 219 | 6.68E-62 |
| ABCB6_HUMAN | 41.374 % | 452 | 9.15E-149 |
| ABCB7_HUMAN | 58.655 % | 749 | 0 |