- Clone 'cima005j09' >
- EST 'BW407693' >
- Clone 'cilv032b14' >
- Transcript 'Cisavi.CG.ENS81.R58....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S126.g08351.01.t
Possible name(s)
AC011455.3; SARS2
Gene model
Location
S126 [74,754 / 79,382]
Amino acid sequence
Length: 566
>Harore.CG.MTP2014.S126.g08351.01.p
MLSVSSKSVIFMSRLLRNWNHVGYTTHYIEEKCLSRSYAFSPHENDQSMKRLKQFLEREK
NVIAKLKNDFAEPYVDLDSVVEYVAKNGKHKPSTNDLYNCACQHSLHRPAIDMKFILENK
EMVAENLKNRKLPRVILDLSKDIIAPYEKLLAIRKQKTEWEDRKKAINMWMKDYWTNKKN
QVDPQEAEKMRDESINLGCLITLLTRIDTELEKLFYEKVLLLPNMTHPDVPIGIETDVKV
LKTVGEKTPSQGSYGHMEVGERTGIIHQKHISNFTGHRSYFLCDDAADLEQALVRFTLDR
LRTKGFRMISGPNVLHGSMFEACGMASTKINDMLYKIVQEQEENFYISGTSEVTIASFLA
NHAISIKDLPMKFCCVSTCCRKETDNRRDPRGLYRVHHFTKVEMFGVTANETGQESAELF
QEFLQTQEELFSDLGIHFRIVNMPTGDLGLPAYQKIDMEAWMPGRDSYGEISSTSNCTDF
QSRRLHILYKQSDDYKFAHTINGTACAVPRMIIALCENNQTQEKTIELPEVLHPYLKRTF
IKKSTYKRMEYIGPNQSRKKWRMPKE
Nucleotide sequence
Length: 3,152
>Harore.CG.MTP2014.S126.g08351.01.t
GGCTCAAGTACCCCAGGCTACATACTCGATGTCTATGTAAAACCCTGTAAAAAAAATTTA
TTGTCGTATAGTATTGTCCTTTTCAAAGAAAACCTTAACATACTTATCCATACTTTACAT
CTTTTGAGTAATCATGCTTTCTGTGAGCAGTAAATCCGTTATTTTCATGAGCCGTCTCCT
GCGAAATTGGAATCATGTTGGTTACACTACTCACTATATTGAAGAAAAATGTCTATCACG
ATCGTATGCTTTTTCACCTCATGAGAATGACCAAAGCATGAAACGACTCAAGCAATTTTT
AGAAAGAGAAAAAAACGTGATAGCCAAACTAAAAAATGATTTCGCGGAGCCGTACGTGGA
CTTGGACAGTGTTGTAGAATATGTAGCAAAAAACGGCAAACATAAACCTTCTACGAACGA
TCTGTACAATTGCGCATGTCAACATTCTCTGCATCGTCCTGCAATAGATATGAAATTCAT
ATTAGAAAACAAAGAGATGGTTGCCGAAAATCTAAAAAATAGGAAGCTGCCCCGTGTCAT
TTTAGACCTCTCCAAAGATATAATTGCACCTTACGAAAAACTCCTTGCTATAAGAAAGCA
GAAGACGGAATGGGAAGATAGAAAAAAAGCAATAAATATGTGGATGAAAGACTACTGGAC
GAATAAGAAAAATCAAGTGGACCCTCAAGAAGCAGAAAAAATGCGAGACGAATCAATCAA
TCTGGGATGTTTAATTACTCTGCTGACACGAATTGACACAGAGCTAGAGAAATTGTTTTA
CGAGAAGGTTTTGTTGCTGCCAAATATGACGCATCCCGATGTACCAATCGGAATTGAGAC
AGATGTAAAGGTCCTAAAAACAGTGGGAGAAAAAACGCCAAGTCAAGGGTCCTACGGACA
CATGGAAGTGGGTGAAAGAACTGGAATTATCCATCAAAAGCACATTTCTAATTTTACAGG
TCACAGATCGTATTTCTTATGCGATGACGCTGCAGACTTGGAACAGGCACTGGTACGTTT
CACCTTAGATCGACTTCGTACTAAAGGATTTCGTATGATATCCGGGCCCAACGTCCTGCA
CGGTTCTATGTTTGAAGCTTGTGGAATGGCAAGCACAAAAATAAATGACATGCTCTACAA
AATAGTTCAAGAACAGGAGGAAAATTTCTACATCTCGGGAACATCTGAAGTCACCATAGC
GTCTTTCTTAGCAAACCATGCTATTTCTATCAAAGATTTACCAATGAAGTTCTGTTGTGT
GAGTACATGCTGTAGAAAAGAAACAGATAACAGGAGAGATCCTAGAGGCTTGTATCGAGT
TCATCATTTCACCAAGGTCGAAATGTTTGGAGTTACAGCGAATGAAACTGGTCAAGAAAG
TGCAGAACTGTTTCAAGAATTTTTACAAACCCAGGAAGAATTGTTTTCTGATCTCGGAAT
CCATTTCAGAATAGTTAATATGCCGACAGGCGACTTGGGTTTACCGGCATACCAGAAAAT
CGACATGGAAGCTTGGATGCCGGGACGAGATTCTTACGGCGAGATATCGAGCACGTCTAA
CTGCACCGACTTTCAAAGCAGGCGCTTACATATTCTTTACAAACAGAGCGACGACTACAA
ATTTGCTCACACAATCAACGGCACAGCGTGTGCGGTACCACGAATGATAATAGCTCTTTG
TGAAAATAACCAGACCCAGGAGAAGACTATCGAACTACCAGAAGTTCTACATCCATACTT
GAAACGAACTTTTATTAAAAAATCAACGTACAAGAGAATGGAGTACATTGGTCCGAATCA
ATCGAGAAAGAAATGGAGAATGCCAAAGGAATGAAGCAACTATAGGGTGGATGTGTAGCA
GCAATACCTAATTAATTTTCTTTAGTAATATGTTAAGCCAAAGGGTATCTAACTAATAAA
TTCAGGATCTGGATTCGGCATATATATGTGTCCATGCATAATATATGGAAATGTAACGAA
ACATTGTACTAATGAATCAATGGATATAGAGCATGCAAAGTGTTATACATGAACTAGCCT
AAATATATGAACTTCAATTATTAATTGACATATTTCTTGTACAGATATAGACACTGATTA
TGTAGTACTTGTATAGTTCCCATAGCTTATGCTTACAGTGTTATTTAGTTTTATAAAAAA
TATGTACAGAGAGGTAAGAAAAGGGTTCAACAGACAGTCAGCTCTGTCCTTATATTTAGT
TCTTATATTTCATGAAAATTATTATGCCAGAACACAATTTTTCTTTTAAAAACAAAGATA
CCAGAGTATACTGTCATGTTTATTTGCCAGTCGCTGAATATATATTCCAGACCTGCGGAT
TGACCACCCTATACTAAGAGTAAGGGTGAATGAGATTTTGATTCATCATGTTATTTAAAG
TATTGGAGAGTTATTTTTATTATGGATTGTCTGAGGCTGGTTGCATTTTTTCTCTTGTAC
AATGAGGCAGCTGTTGTTCTATTTTCCCAAATATCTAGACCTAGTTTAAAATTTGAGACA
ATTGGAAAAAACTAGTCTCTCAAACAGAGCGCAACCACCATATCCCATAAATGTTTCTAT
CATCATCAGTACCGTTATCAATATTCGCTTGTCTTTCCATTGCCTTTATGTTGGTGGCTC
CGAGAAGTTGGGAAAGCAAGTTGCAAGTTGCTGGGAGTCCCCAGTGGCTCGGTGCGTTGA
AGTTAGAGGATTAATTACCAATCCCTGAGTTAAATTGATGTTCCTGCCTTCCTTTTCCGC
TTTGTAATCTAGGAACATTTCTTTGAAAGCTACAAAGTCTGAGAAACTGGTCAGCATATC
AAATATATCTCCCGTGATTTCATCCTGCCGTGCTTTCAGTGAAGATACAAATTTTTCCAT
CGAGAAATTCGGAATTCTCCTTGCAAGCTCGTCGTTCAAAAATTTTTCAATGGTGAAGGT
ATATTCTGTAAAAATATCTGTATATATAAATTTATTTTCTTCGGTGTCCTCAAATTCACT
GTAGTATTTTTCCATGAAAGATTCTTGCAAATTCTGAAAATCATCACCTATTACAATATC
TTCAATGTGACCAACCACGGAATCAAATTTTTGATCTCTTTTAGAAGTACACGACACATC
ATCTATATCAATATCCATAGTACCAATTCCTT
| PANTHER |
Ser-tRNA-ligase_type_1 (IPR002317) - T[96-551] 2.1E-148 |
| SUPERFAMILY |
tRNA-bd_arm (IPR010978) - T[111-231] 3.19E-8 |
| TIGRFAM |
Ser-tRNA-ligase_type_1 (IPR002317) - T[111-536] 2.9E-97 |
| ProSiteProfiles |
aa-tRNA-synth_II (IPR006195) - T[254-529] 20.818 |
| Pfam |
aa-tRNA-synt_IIb (IPR002314) - T[335-519] 4.6E-28 |
| PRINTS |
Ser-tRNA-ligase_type_1 (IPR002317) - T[394-407] 1.1E-16 - T[437-450] 1.1E-16 - T[454-470] 1.1E-16 - T[472-488] 1.1E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYSM_HUMAN | 42.105 % | 387 | 5.34E-129 |
| SYSC_HUMAN | 35.549 % | 197 | 1.7E-56 |