- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S127.g12395.01.t
Possible name(s)
SLC6A11; SLC6A12; SLC6A13
Gene model
Location
S127 [54,241 / 63,040]
Amino acid sequence
Length: 664
>Harore.CG.MTP2014.S127.g12395.01.p
MPEESIKMTTEISMENVGFIGEAGEDSQKQKKDERITWSKPVEFILNVIGYNVGLGNVWR
FPYLCYKNGGGAFLIPYILMLCICGLPVLFQELAMGQFTKQGAIGAWQLIPMMRVQLVSD
KKKLEGGGHATSLRLKNRIAAIMIGSARSIHFRLRLPPPAIYCHQHASKVVISGKRLAFT
DALNAQTIVCILQGIGFAGLLLAIYYVTHIIVVMAWCLFYLVHSFTSEALPWSTCTNHWN
TNSCIPVAAAALNTSLSHAGNLTIHSGNASYSTIEFWSNYVLQQTNGIENMGSFTNWRMV
LCFLASWLICYLCISKGIRSTGKVVYVTVSLPYLTMIILFVRGVTLEGAGTGILYYLTPN
VTRLASPGVWVDAGSQVLYSLGVCYSVMFSFGSYNQYNTDCYRQSFLFIIVCSGTSFFIG
FVVFSFIGHMAVSKGVDVSEVVDSGPGLIFQVLPSGVALFPLSQLWSVLFFVMMTFVGVD
TVFGTLEGCFTSLGDIWPAYFGDKASKKYRIGSCFFLMICGLPMMLDGGIYIFELLNYYA
SSGICLLTVALFQLVSIGWLYGADRFFDDVKDMIGYHPCSGLKYCYKYFSPGLILFIFVF
NCSSSAPLTLGKYVFPWWANFIGWMFILSVIVCIPIVIGKTLLRGHGSLRERWHEGLQSK
LEEM
Nucleotide sequence
Length: 2,833
>Harore.CG.MTP2014.S127.g12395.01.t
AGATTTTAATCCATTTCCATTTATTACTAATAACCATTGAAAATTATCATGCCTGAAGAA
AGTATTAAAATGACTACGGAAATAAGCATGGAAAACGTAGGGTTCATAGGAGAAGCTGGA
GAAGATTCCCAGAAGCAGAAGAAAGACGAAAGAATAACCTGGAGCAAACCAGTTGAGTTC
ATATTGAACGTGATTGGTTATAACGTGGGATTGGGCAATGTGTGGAGGTTTCCTTACCTG
TGCTATAAGAATGGTGGTGGAGCCTTCCTAATTCCGTACATTCTGATGCTATGTATTTGT
GGCCTGCCGGTGCTGTTCCAGGAGCTAGCTATGGGTCAATTTACAAAGCAAGGAGCCATC
GGCGCGTGGCAGTTAATTCCCATGATGCGGGTACAGCTTGTTTCTGATAAAAAAAAATTG
GAGGGGGGGGGGCATGCTACGAGCTTACGTTTAAAAAATCGTATTGCTGCGATTATGATC
GGTTCTGCACGATCCATACATTTCAGATTGAGACTACCGCCGCCGGCAATTTACTGTCAT
CAACATGCTAGTAAGGTTGTCATCTCGGGAAAGCGTTTGGCGTTTACTGATGCGCTGAAC
GCTCAAACGATTGTTTGTATTTTACAGGGCATTGGATTTGCTGGTTTGCTGCTGGCCATC
TATTACGTTACACACATCATTGTGGTAATGGCTTGGTGCTTATTCTACCTCGTGCATTCT
TTCACATCTGAGGCGCTGCCTTGGTCCACATGCACCAACCACTGGAATACGAACTCCTGC
ATACCTGTTGCTGCTGCTGCCCTAAACACAAGTCTATCGCACGCTGGCAACTTGACGATT
CACAGTGGGAATGCTTCGTACTCCACCATAGAATTCTGGAGCAATTACGTCCTGCAACAA
ACAAACGGTATAGAAAACATGGGATCTTTTACTAATTGGAGAATGGTGCTCTGTTTTCTG
GCATCTTGGTTGATTTGCTATTTATGCATTTCAAAAGGGATTAGGAGCACAGGCAAAGTC
GTCTATGTCACCGTCTCGCTCCCCTATTTGACGATGATAATACTCTTCGTTCGTGGCGTG
ACACTGGAAGGCGCTGGAACTGGTATCTTGTATTACCTAACACCGAATGTTACCCGCCTG
GCCTCTCCCGGGGTTTGGGTGGATGCCGGCAGCCAAGTTCTCTATTCTCTAGGCGTGTGT
TACTCTGTCATGTTCAGCTTCGGCAGTTACAATCAATATAACACTGATTGCTACAGACAA
TCATTTCTTTTCATCATCGTGTGTAGCGGAACGTCATTTTTCATCGGGTTCGTGGTTTTT
AGCTTCATTGGTCACATGGCGGTGTCTAAAGGCGTGGATGTTTCCGAAGTTGTCGATAGT
GGTCCCGGACTGATATTCCAAGTATTACCATCAGGTGTAGCGCTCTTTCCACTATCTCAG
TTGTGGTCTGTGTTATTCTTCGTCATGATGACGTTCGTCGGAGTCGATACCGTGTTTGGA
ACCCTTGAGGGTTGTTTCACAAGCCTGGGTGACATTTGGCCAGCATATTTCGGTGACAAG
GCAAGCAAAAAATACCGAATCGGGTCGTGCTTCTTCCTAATGATCTGTGGTTTGCCTATG
ATGCTGGACGGAGGAATATATATCTTTGAGCTGCTAAACTATTATGCTTCAAGTGGTATC
TGTCTTCTTACCGTAGCACTGTTCCAGCTCGTGTCGATCGGGTGGCTGTACGGAGCAGAT
CGATTCTTCGACGACGTCAAAGATATGATAGGTTACCATCCCTGTTCCGGCCTCAAGTAT
TGTTACAAGTACTTTTCTCCGGGATTGATATTGTTCATTTTCGTATTCAACTGCTCATCG
TCTGCTCCTCTGACTTTGGGTAAATATGTTTTCCCCTGGTGGGCGAATTTTATTGGCTGG
ATGTTTATTCTCTCTGTGATTGTGTGTATTCCAATAGTCATTGGCAAGACCCTGCTTAGG
GGCCACGGAAGCTTGAGAGAGAGGTGGCATGAAGGATTGCAATCAAAATTGGAGGAGATG
TGATGTACGAGTAAAATCCTGTTTACTTATTTTGTATAATAGCTCATGTCTTTTCTACTC
CCACATACCAAGAAATCCGTGAACTCTTGATTGATAGAAAAAATTGATAGACACCTGATT
TCATTAATAGTAGTTCAAAATTAGTAAACTATTATTACTAGTATAAATTATAATTAAACT
GTTAGTTACATTCATTGGTACGATTTTTCTAGTAAGCAGTAAGAAGTATAGGCAAATTCC
TTCGCCTTTTCCGTGGTTTTTGCTTGTGCATAGGTGCGAAAATGAGCGATTGTACATTTC
TAAATTTCCTAATTCACTTACTCAGCAATAGCATCTATTTGCTTTGAATGTAAATTTTAT
ATCAGAAAAATATTTTTGGTATTGATCGAATAACTACCATTTGTACCATTTTGTATATCG
TAACGGGTATCGAATTTCCAAGGATTTTTTTTATCATTTACTGTATATACACATGCGTTA
TCATTTACTGGCCACTTACTTTTGGTCAACTCAGTATATTGAGTATTTTGATAAAGAGCA
CAGAATTTTAGGGTCATTTTTGGTGAGTGTAATTTTTGCTTTATTGTTCTTTCGAATTGC
AGCATATCGCGCTAGTGCGATGTGACCCGTTTTTTTTTTATCAGTTAACCTATTTAATAA
TGGAATAAATTACTGTGTGATATGAAGTGAGGGATAGCTTATCCCCATGGATAGTGATGT
AAAATACAGAGAATATTGTTTAAAATTCAGAAACGTTTGAGGCAGTCACGGTATTGCGTC
GGGTACAGTGAAG
| PANTHER |
Na/ntran_symport (IPR000175) - T[18-114] 2.1E-186 - T[186-656] 2.1E-186 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[34-647] 84.737 |
| Pfam |
Na/ntran_symport (IPR000175) - T[35-114] 2.7E-35 - T[187-639] 7.1E-134 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[37-110] 2.09E-33 - T[179-244] 1.14E-112 - T[271-638] 1.14E-112 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[43-64] 1.4E-38 - T[72-91] 1.4E-38 - T[460-479] 1.4E-38 - T[543-563] 1.4E-38 - T[583-603] 1.4E-38 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[59-73] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A12_HUMAN | 44.118 % | 410 | 1.7E-135 |
| S6A13_HUMAN | 42.431 % | 401 | 5.28E-132 |
| S6A11_HUMAN | 42.706 % | 385 | 1.18E-125 |