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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.216.v2....'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Boleac.CG.SB_v3.S275...'
  4. Transcript 'Phmamm.CG.MTP2014.S1...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S12.g04551.01.t

Possible name(s)

KCMF1; RNF138; RNF166

Location

S12 [666,959 / 672,386]

Sequences

Amino acid sequence

Length: 503

>Harore.CG.MTP2014.S12.g04551.01.p
MSRHEGVSCDNCLKSNFRDKRFKCLICYDYDLCEQCHNRNVSTSRHSPFHPMQCILTRND
FDLYYGGEGITMDNPPAVTCPLCGKHGLTESTLQEHWNAHHLDNNAEVVCPICAAVPTGD
PNHVTDEFATHLMIEHNNTPDQIGGRHMRRMFYPGRGMRGARAQRSANMNFSSGPSTVPA
FSNVVGSTTSSVSQMRDAMDPIAELLSQLSGVRRNAQQLQQTVSTASQLQELQAQLQLER
QRATIIRQQLERFPGKLQTTQNGQESANQANAQNKSYANAMKAAVKKDKEPSSVTNDNDS
RLLLSKIYEQNSSDGSEIHNIDTVEQSLFVRELILALPNDEEPRPDNMSPISQPSSTSAR
AIPVDCGILSSTPLQLYAGGGGPGKVLHASHTSLASASEVCQSPERSDLGDQFHDTGLGR
SVVSESDIPTQSSNTLRGARKSESEEKMPLLQSGLVSEMKKDSAARGVNLQQQPFSSAGA
GLLCPQATHVVPIHVSNYGQWCD

Nucleotide sequence

Length: 2,811

>Harore.CG.MTP2014.S12.g04551.01.t
GATATTTTGCTCTTGTATGTTTCAGTGAATGTAAAATTCTCTAATATTTCTATATTTTGT
ACTGAATAATGTCACGTCATGAAGGTGTCAGCTGTGACAACTGCCTGAAAAGCAATTTTC
GTGACAAACGCTTCAAATGTTTGATTTGTTACGACTACGATCTTTGTGAGCAGTGTCACA
ACAGAAATGTTAGCACTTCACGACACTCTCCCTTTCATCCGATGCAATGCATTTTAACAA
GGAATGATTTTGACCTCTACTATGGTGGAGAAGGAATCACAATGGACAATCCACCTGCTG
TCACTTGCCCACTCTGTGGTAAACACGGCCTCACTGAATCAACACTCCAGGAGCATTGGA
ATGCTCATCATCTTGATAACAACGCAGAAGTGGTCTGCCCTATATGTGCTGCCGTGCCTA
CCGGAGACCCCAACCACGTCACTGATGAATTCGCCACCCACTTGATGATAGAACACAATA
ATACACCGGATCAGATCGGAGGTCGTCATATGAGACGTATGTTCTATCCAGGTCGTGGTA
TGCGAGGAGCCAGAGCTCAGCGCTCTGCTAACATGAATTTCTCGAGTGGACCTAGCACCG
TGCCTGCTTTCAGTAACGTAGTCGGCAGCACGACCTCATCAGTCTCTCAAATGCGTGATG
CTATGGATCCTATTGCAGAGCTGTTATCTCAACTGAGTGGCGTCAGACGTAATGCCCAGC
AGCTGCAACAAACAGTGTCCACTGCTTCTCAACTGCAGGAGTTGCAAGCACAACTTCAGT
TGGAAAGACAACGTGCCACAATCATTAGACAGCAGCTGGAACGATTCCCTGGTAAACTGC
AAACAACACAAAACGGTCAAGAGAGCGCGAACCAAGCAAATGCACAAAATAAATCTTATG
CAAATGCCATGAAAGCAGCTGTAAAGAAAGACAAAGAACCTTCATCTGTAACCAACGATA
ATGACTCACGACTACTACTATCTAAGATTTATGAGCAAAATTCTAGTGATGGGAGTGAAA
TTCATAACATAGACACTGTTGAACAGAGTTTATTCGTTCGAGAATTGATCTTAGCGTTGC
CTAATGATGAAGAACCGAGACCCGATAATATGTCGCCAATATCTCAACCTTCTTCCACCT
CAGCACGTGCGATTCCCGTCGACTGCGGTATACTTTCTTCGACTCCTCTACAACTGTATG
CTGGTGGAGGTGGCCCGGGCAAAGTCCTTCACGCGTCACATACCAGCTTGGCCAGCGCAA
GCGAAGTTTGTCAGAGTCCGGAAAGGTCCGATCTCGGGGATCAGTTCCACGACACGGGCC
TTGGAAGATCAGTTGTAAGCGAAAGCGACATACCAACCCAAAGCAGCAATACTTTGAGAG
GGGCGAGAAAAAGTGAGAGCGAAGAGAAAATGCCTCTACTCCAGTCCGGACTCGTGAGCG
AAATGAAGAAAGATTCTGCTGCTCGTGGGGTCAACCTCCAACAGCAGCCTTTTTCATCTG
CTGGCGCCGGGTTATTGTGCCCCCAAGCGACGCATGTCGTGCCAATTCATGTTTCAAATT
ATGGTCAGTGGTGTGACTAATCTGTAACCTTGTTGCAAAGCTGCAAATAAAAGAATAAGT
GTTCGACGAAGGAGAGTCGGTTAAGTATTGTCAGTGGTTTGACTGTGTGACAACAATAAA
TAAACAATACAAAAATAAATGCTAACAATAGTTCTATTCGTGTTTTGTCTACGGATGTCG
ACCGTATTTATGTTACTCGATTATTAAATGGTTTCGTTTGTTTCCTGTTTTTATTTCTCT
CGCTTTAATTCGATTGCTGGCAGCGTCGATTGCCACTGATGTAATAATTTATTATTTATG
CATTACATTTTTGTAATATAAATGTGTATGCTGTGTTGGATGATCTTGATTTTATTGTCA
AGCTTCGTGGAGCGTACTCCACTCATCTCCTTCCCATATTATTGTAGAATGTAGTGGTAA
AGGTGGTACCCCTCACATTGCTGTTGAATAATGCAGGCTCATAAGGTGTACACACCATTA
CCATGGGCAGTAGAATTATGATTGCAGTTTCGTGCAAGCAATGTATGGATAAAAAAAATA
TTGAGTTAAAAATTTGCTATTAACCCTGGGAATGAATATCCCATTGTGATAGACCTCTCA
TACCTTGTACTCATTCACCTGCATAAACTTCTTGTAATCATGAGCGTATCGGAACTTTTG
TGTTAATTAGGATCGATTATTAATTCTCATTGTGTGTTGTGACTGTTTTGCAATGTTGCC
TGGTGAGCACTTCATCAAAATACACTACGTAAGTTGTTAGAACGCTGTAGAAAACCGGAC
TGAAAAATCACATTATCCTGGTGTGTTTTCTCAACCATATTTTTCAATATTCATGCGTTT
GTGGCTGTTTGCAGTTCAATACAATATTATAGGCAAAAGAAAATGATTATGCTTATCAGT
GTGAGCCATTGTGGGTTTGCACAGTTTTCCATAATTAAATCTTGGGGGAAATAAAAGGAA
CTGAAGTTGTCGAGGCTTCTGCTGAAGATTGGATTTAAATGCATTATGCACTGTTGGATT
ATAATGGTGCCAAGAAATTAATTTGTTTAAATATAATTAAACCCCTTAGTCACATTCGGC
CAGTACCTGGCCATGGCAAGTGTATCGTATTGGAACACTAAATGGGTATCTTTAAAAGGG
AAATTACGCTATTATTAAACATTCTTTATTTAACATATAAGGATTGCATGAGGATAGTAT
GACCGTAATTAGCAAGAAAAATATTGTCAAATGTTACGTGGCAACGTTTAT

InterProScan

ProSiteProfiles
Znf_ZZ (IPR000433) - T[3-50] 12.59
SMART
Znf_ZZ (IPR000433) - T[3-48] 7.5E-10
Pfam
Znf_ZZ (IPR000433) - T[4-41] 7.9E-8
ProSitePatterns
Znf_ZZ (IPR000433) - T[9-36] .
Pfam
Di19_Zn_binding_dom (IPR008598) - T[78-137] 3.8E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KCMF1_HUMAN 49.415 % 291 2.04E-94