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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.263.v1....' > 
  2. Transcript 'KH2012:KH.C12.200.v1...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S12.g09310.01.t

Possible name(s)

AP002373.1; RBM11; RBM7

Gene model

Harore.CG.MTP2014.S12.g09310

Location

S12 [515,300 / 515,960]

Sequences

Amino acid sequence

Length: 219

>Harore.CG.MTP2014.S12.g09310.01.p
MENRLNDDDRTLYVGNITSKVSRELLFELFLQAGPVQSVHIPKDCNGRQRNFAFVKFKHL
VSVDYAINLMSSICMFDSQLNLRYTHKSSKGQDRKDGDVPKPTSDDPDSRMPPGRNRYDS
FPVPPAFAIDPYRNRMNVPPRFFMPPQGSMWMPINGFAQEQHQEEDYARQRPQRSYQDDR
QRNPVDRHRNGYESRHRNHSPYRRPHNDDRRPSHCHRRR

Nucleotide sequence

Length: 660

>Harore.CG.MTP2014.S12.g09310.01.t
ATGGAAAATCGTTTAAATGATGACGACAGAACACTGTATGTAGGAAACATAACGTCTAAA
GTCAGTAGGGAACTTCTTTTTGAGTTGTTCCTGCAAGCAGGACCTGTTCAATCTGTTCAT
ATTCCAAAAGATTGCAATGGAAGACAGAGGAATTTTGCTTTTGTGAAATTTAAGCACCTG
GTCTCAGTAGATTATGCTATCAATCTTATGAGCTCCATTTGTATGTTCGACAGTCAGCTT
AATCTTAGATACACACACAAATCGAGCAAAGGACAAGATAGAAAAGATGGCGATGTACCT
AAGCCTACGTCCGATGACCCAGATAGTCGAATGCCGCCTGGCCGAAATCGTTACGATAGT
TTCCCGGTACCCCCGGCATTCGCCATTGACCCATACAGGAACAGAATGAACGTGCCACCT
CGTTTTTTTATGCCGCCACAGGGGTCCATGTGGATGCCAATTAACGGCTTTGCTCAGGAG
CAACATCAAGAGGAAGACTATGCGAGACAGAGGCCACAGAGATCTTACCAAGACGACCGT
CAAAGAAATCCTGTTGACCGACATCGAAATGGATACGAAAGCAGGCACAGAAATCATTCT
CCCTACAGAAGACCGCACAATGACGATCGCAGGCCCTCGCACTGCCATCGCAGAAGATAG

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-97] 2.4E-18
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[6-116] 8.87E-21
ProSiteProfiles
RRM_dom (IPR000504) - T[10-87] 14.539
SMART
RRM_dom (IPR000504) - T[11-83] 2.0E-14
Pfam
RRM_dom (IPR000504) - T[12-75] 1.8E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RBM7_HUMAN 50.562 % 95.1 9.07E-24
RBM11_HUMAN 44.828 % 84.7 1.08E-19