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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.491.v2....'
  2. Transcript 'KH2012:KH.C3.491.v2....'
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S12.g14536.01.t

Possible name(s)

PDE6D; UNC119; UNC119B

Location

S12 [368,228 / 371,893]

Sequences

Amino acid sequence

Length: 349

>Harore.CG.MTP2014.S12.g14536.01.p
MAFSCSVNIDFHLFGDSSLPIDCAILPFFYCSQVPLLYHLLIHFVGARCSPVTASDLVVS
CSTRQVDFNMMKKSNGNKKKGGSFLSRHQKKNKESNSGISPKETVTEEELLEKESISPDD
ILKLGCPTEKYLCSLNDNVYGIDFTRFKIRDMDTGSVLFEISKPSNELVQEVDSQDSDEI
DANAGRFVKYQFSPQFLTLGVVGATVEFVVGDKPVQHFRMIERHYFRDTLLKSFDFDFGF
CIPNSKNTCEHIYEFPELAEELRKEMIKSSYETKSDSFYFVDNKLIMHNKAEYAYNGLHS
CLVIKKIHWFSQVYLNIDHCNCDVLTKKILHFAFDIQVTRFHCFFVSKI

Nucleotide sequence

Length: 1,050

>Harore.CG.MTP2014.S12.g14536.01.t
ATGGCGTTCAGCTGTTCAGTCAATATTGACTTTCACTTGTTCGGTGATTCCAGTTTGCCG
ATTGATTGTGCTATTCTGCCGTTTTTTTATTGTAGTCAGGTGCCGCTGCTATATCATTTA
TTAATTCATTTCGTTGGTGCTCGTTGCAGTCCAGTAACCGCAAGTGACTTAGTTGTTAGT
TGTTCTACAAGACAGGTTGATTTTAACATGATGAAGAAGTCAAATGGAAACAAGAAGAAA
GGTGGAAGTTTTCTTTCAAGGCATCAAAAGAAAAATAAGGAAAGCAATAGCGGAATAAGT
CCAAAGGAAACAGTTACAGAGGAAGAACTTCTTGAAAAAGAGTCAATAAGTCCCGATGAT
ATCTTAAAGCTAGGCTGTCCAACCGAAAAATACCTATGTTCGCTGAATGATAATGTATAC
GGGATAGATTTCACACGCTTCAAGATTCGAGATATGGACACCGGTTCTGTGCTTTTTGAA
ATTTCAAAACCATCAAATGAACTTGTTCAAGAAGTGGATTCCCAAGATAGCGATGAAATC
GATGCAAATGCTGGACGGTTTGTGAAATATCAGTTCTCTCCACAATTTCTTACGCTCGGA
GTAGTTGGAGCCACAGTGGAATTCGTGGTGGGAGACAAACCGGTACAACATTTCCGCATG
ATTGAGCGTCATTATTTTCGAGACACGTTGTTGAAAAGCTTCGATTTTGATTTCGGATTC
TGCATTCCAAACAGCAAAAATACATGTGAACACATTTATGAGTTTCCAGAACTCGCTGAG
GAATTGAGAAAGGAAATGATCAAATCATCGTACGAAACAAAATCAGACAGTTTTTACTTC
GTTGACAACAAGCTAATAATGCATAATAAAGCGGAATATGCCTACAACGGATTGCATAGT
TGTTTAGTAATAAAAAAAATTCACTGGTTCAGTCAAGTGTATCTCAACATAGATCATTGT
AACTGTGATGTATTGACCAAAAAAATTTTGCATTTCGCTTTTGACATTCAAGTTACTCGG
TTTCATTGTTTTTTTGTCTCCAAAATCTAA

InterProScan

Gene3D
PDED_dom_sf (IPR037036) - T[104-299] 3.4E-91
SUPERFAMILY
Ig_E-set (IPR014756) - T[134-295] 2.8E-48
Pfam
PDED_dom (IPR008015) - T[137-295] 4.7E-72

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
U119B_HUMAN 60.268 % 278 2.92E-93
U119A_HUMAN 61.576 % 258 1.35E-85