- Transcript 'Boleac.CG.SB_v3.S130...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S12.g14619.04.t
Possible name(s)
FGFR1; FGFR2; FGFR4
Gene model
Location
S12 [256,472 / 261,630]
Amino acid sequence
Length: 405
>Harore.CG.MTP2014.S12.g14619.04.p
MKEFEVKVASTAFVLVLFSLTINQILASETSTKFRSPVPAPTVPDVTQFRTKSATANKTL
MVKRGETIRINCRVRGYPKPNVLFYRGKKLLKNPTPDDTDPTIMRVRVLGTTLRIFPAYL
EDSGLYTCIAHNANEKNSSLSYHVEVLDDDSIKDWNHLPNEGNEENVVSAPKQDGASGGQ
KPYWTKREKMMKRLHAEPAGNTVRFRCAVDGNPKPQVLWYKNDLIVQKNDRVGGYKYRNQ
VLILESVVLSDKGNYMCVARNEYGSINHTYQLDVQERSASKPILAEGLPQNKSAYIGDDV
TFKCKVYSDAHPHIQWLKSINNHNNAAPNYTVLKVINRCKSILDVTLVLKHLNNTVPCYL
LDFICLSVQLMVEFVFKYHSLNSIFSHFSFTQTISLLAAMECPSS
Nucleotide sequence
Length: 1,218
>Harore.CG.MTP2014.S12.g14619.04.t
ATGAAGGAATTCGAAGTAAAGGTTGCAAGTACGGCCTTCGTTCTTGTACTGTTTTCACTG
ACTATTAATCAGATACTCGCCAGCGAAACATCAACCAAATTCCGTTCACCTGTTCCGGCT
CCTACTGTTCCAGATGTTACTCAGTTTCGCACAAAATCTGCTACGGCAAATAAAACCTTA
ATGGTGAAGAGGGGTGAAACGATTCGAATAAACTGCAGGGTCAGAGGCTATCCAAAACCA
AACGTGCTCTTCTATAGGGGTAAAAAATTGCTGAAAAACCCGACCCCAGATGATACTGAC
CCAACGATTATGAGAGTGAGAGTCCTTGGAACCACCTTACGCATATTTCCTGCGTACTTA
GAAGATTCCGGACTGTATACGTGTATTGCTCATAACGCTAATGAGAAAAATAGTTCTCTC
AGCTATCACGTGGAAGTCCTTGATGACGATAGTATCAAAGACTGGAATCATCTACCTAAC
GAAGGTAATGAAGAAAATGTCGTTAGCGCACCTAAACAAGATGGTGCTTCTGGAGGACAA
AAACCATATTGGACTAAACGGGAGAAAATGATGAAGCGCCTCCATGCAGAACCAGCAGGA
AACACGGTTCGTTTTCGGTGTGCCGTCGACGGCAATCCTAAGCCTCAAGTGCTCTGGTAT
AAGAATGACCTTATTGTACAAAAAAATGATAGAGTTGGTGGTTACAAGTACCGCAATCAG
GTTCTCATTTTGGAATCTGTTGTGCTTTCCGATAAAGGCAACTACATGTGCGTCGCACGA
AATGAGTATGGATCTATAAACCACACTTACCAGCTTGATGTACAAGAACGCTCGGCATCT
AAGCCCATTCTGGCTGAGGGCCTCCCACAAAACAAAAGTGCGTACATAGGTGACGACGTT
ACATTTAAGTGCAAAGTGTACAGTGACGCCCACCCACACATCCAGTGGCTGAAAAGTATC
AACAATCATAACAATGCTGCGCCGAACTACACAGTACTCAAGGTAATCAATCGATGCAAA
AGCATACTAGATGTGACACTTGTTTTAAAGCATTTAAACAACACTGTGCCTTGTTACTTG
CTCGATTTCATTTGCCTTTCAGTTCAGCTAATGGTAGAATTCGTTTTCAAATATCATTCG
TTAAACAGCATCTTTTCTCATTTCTCTTTTACGCAAACCATTTCATTGCTTGCAGCCATG
GAATGTCCATCTTCTTGA
| Gene3D |
Ig-like_fold (IPR013783) - T[43-149] 3.2E-15 - T[172-274] 8.9E-26 - T[277-355] 2.5E-9 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[44-141] 11.188 - T[182-273] 11.279 |
| SMART |
Ig_sub (IPR003599) - T[57-147] 1.4E-8 - T[192-275] 3.6E-9 - T[289-373] 140.0 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[58-149] 3.09E-15 - T[197-277] 7.34E-20 - T[282-324] 1.21E-6 |
| SMART |
Ig_sub2 (IPR003598) - T[63-135] 3.9E-10 - T[198-264] 3.1E-14 |
| Pfam |
Ig_I-set (IPR013098) - T[199-274] 1.3E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FGFR1_HUMAN | 36.877 % | 189 | 2.28E-53 |
| FGFR2_HUMAN | 48.879 % | 207 | 1.14E-59 |
| FGFR3_HUMAN | 40.283 % | 181 | 1.65E-50 |