- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S12.g15339.01.t
Possible name(s)
LRP1; LRP4; LRP6
Gene model
Location
S12 [390,765 / 405,820]
Amino acid sequence
Length: 1,945
>Harore.CG.MTP2014.S12.g15339.01.p
MKSTQMPRACIQGKVFSSVGVFFWFTEFAPVLKRVSMFTPSCHVGYCYCLINNVCLTFSV
NNIFDVSKASNPTSCVDESELTCKSGECINETWWCDGDADCSDNSDEEQCVQPTCKPTDF
VCENKECIIAEWRCDIDFDCTDGSDEVGCDDKSELVTVVIASNATCRSDEFMCKGRYREC
ILLAYKCDGDQDCPDNSDEKYCNNTCSMEDFRCKDGQCIPLTYRCDKSEDCHDGSDELEC
AERETLICMENEFRCTSNLCISEAWRCDGDQDCGDNSDEVNCSACGRDQFKCKASLRCIR
LSWRCDGEVDCMDKSDEMFCDRCEENQYKCSDGQCIGTHKLCDGHVDCFDRSDEPPVRMC
DNVMDNNVTKKLCHNGNGGCRHICTNTVNGPVCSCNKGHQLGEDGVSCVDIDECAIESSC
SHLCVNSNGSYTCSCLYGYALRRDGRTCKASGPEPSLLFANRIDIRKMQPERHELKPVLQ
NLKNAIALGRELMFWSDVTLDSIKCSFMNGSAVREVVSVGLESPVGIAVDWIHDLLYWTD
SGTSKIEVSSLNGDMRKVLIWQELEKPRAIALHPLKSLMFWTDWGVVPRVESAWMDGTGR
RTIAYTQLYWPNGLTIDYTRDHVYWVDAKHHVIERADLDGQNRQAVISRGLPHPFAITIF
EDKLYWTDWETKSISSANKFTGSSRHTIRNHLHFPMGIKTYHPLRQPEGENNCSHSRCSH
LCLPKPEGFTCVCKTGFRKINFTHCAEEIDEFLIFARKSDIRRISFDSNELSDTVVPLRD
INSAVALDWDNDYVYWSDVQLDTINRARWDGSQQRKIIDASLDSPAGLSIDWFTNKIYWT
DAGLNRIEVALVGGALRSVLIWENLDRPRDILVFPENGLLYWTDWGRQPKIECASMDGSN
RHAIVKNMLKWPNGLALDEEDLRIYWTDAGQSTIESCRLDGSDRQLVLKKNLPHPFGLTM
HKGRVYWTDWTLNSIQSVNKHTGGDRKIIRENLDYLMDIQYYHKNRKITNNPCKERNGNC
SHLCLLAHPVGALQTTEILPSPSMSCACPTGYALSSDRKTCSTQMTKFVVVARRTDMRLI
SLDVPYPADVKLDVTAEMVNVIAVDVDAVNEYIYWSDVGLSLISRSPLATPEHSEIVIND
GLGAADGIAIDEYERKLYWTDARRKLIAVSELDGKLQKVLVYEDVDSPRAIALHHEIGYL
YWTDWGVTAKIERMGMDGTNRSVIVNTDIVWPNGLAIDHDENLLFWADAHTQVIEFSDMT
GKHRKKLPITVQHPYSMSVLAGLLYWTDWQTRNVEVVNLQNYTEQFTMRHNLPNLMGLKA
ATVNKSLIMERTNKYGKCRKGNKCSHLCLRSPTTESGFRCACTTGILLAADGRSCNEQPE
NYLLFTSRNSIRRLALDSDKNVYVQLPVTQLQNVIALDYHYELQKIFFTDVYLDVIRSAE
IDGTDTHTLIESNLRTMDGIAVDWIANHLYWTDTGPNVISVAKLDGSKRKVIIDEQLDEP
RAIVVSPTKGKIFWTDWGAKARIESAYMDGSSRKVLISKEIVWPNGLTLDGEGEGRLFWV
DAHSSLRRIESCDLLGRHRTVQASHVSHGFAITYINHKLYWTDWQTHSISVATESSSFKN
HSVLIKDIDGLMDIKAVSASHQKGTNACDARKKYGGCTDLCLMQGVKSFACVTADVFNST
ISTIGIVPTSSKRPTLTSISKNTVTQPTQSSLTTSRNMNGGETPTSNGSEILALLIGAMI
FAAALGILIGVIVWRHLNKKKLRQQIVLTLGYRNGASQDTLLTSIENVEHRGNLTQSPIP
ESKKPLLNPSPDEEIEDVTDQISQLSASLDNLSNCSDAVPQEDEFSDSEVNEKENCVCND
SAGNQNSGELDSYVSYRVPSSDDLKSGEELDRDSLNVTIISSDNENACETDVDCSFSAKL
TRRPFYYLAAFIHYFFCSPNALIFL
Nucleotide sequence
Length: 8,439
>Harore.CG.MTP2014.S12.g15339.01.t
AATTAAAATGCCGTGAGTAGCACTCTATTTATGTAGCAGTTATATTTAAAGTTTTTTTTA
CGAGAATATTATGGCTTAGCCTGTAATTAGAGTTCAAGCCGCCTACTATTTAACTAAATT
GTGTTCATGCAGTACACAATAATTTTTCATGTAATTACCCGTTTCTGAGCAAATTTCAGC
CGAAGAAACTATGTATTTAATTCACTTACACTATACAGGGAAGGTTTTGTTCCATAGACC
ATAAGGAGATACTTACAAATGTATGGTGTCCACCATTGTTCAAATTTGCTTGTCCTACAG
TCATTATTTATTTCCTGCACTCTCTCCACGACTGTGTAAATATATCTCTTGCTGTGGTAG
GTAGCCAAAGATTATATCTGTTTGCCTAGTTAGATAAAATAAAGTTGGCAGTATGTTCAC
AAAAATTGTTTCAACAGGTTCTACTCGCAAAAATTATTTGTACAAGACTCCCTGCAGTTT
TACTAGAACCCTGAGGAATTCCTTGCGAACTAAAAAAGGGTTTTGTAAACAGATTCTTGA
CCACTTGTGATTGAAGTCCACGTGCGGGCGGCAAGCGTTTTTTGATTCCGTAAATTGCGA
GTAAACGCACTCATCGGTCCGTGTTTGTTTAAGGCGTCTAATCAGTGTATTATCTCTTCA
GTACATAGCAAATTGCTTTGCTAATGTGAAGCCGATATGACGTCTATTTCAAACAGTCAT
CCCGCAGTAAACAATTCTGTCTGTTAATAGTCAATACACTTTTCGTGGTATTATAAATGT
TTTCTGTTCAATAACAGGAACAAATTCTTTTTAGAACATGCAGTCTAAAAAAATACCACT
GATAATTTGATGATGAAGTTGTGTGAAACAATAAATCAGTTGTTATTCATATTAAAAGAT
AATAGAAGGAAACATTGTAAGCATTAATGTGCCGAGTGATAGTATTAAAATTCAAGTATT
AACTTTCTGTGATGAGGATAATATTTATTTGTCTATATTTAACATGAAAATTCGAACCAA
TTAGTGAATGCCACATATAGAAATTCAATCCTATGTATATTGGACCCTTGAATTATGTAG
ATTTTTTGCTAGGAATGATAATTTAATTAAAATTGGAAGGTCTGAGCTGGTCAAATTAAC
ATTTATGTGAAGAATTTTAATCGCCTAATAAGTACAAAAGGCACATATGTAATTCACCAT
TTCACTATCATAAATGTGTTGACTGAGTAACTTGATCCGATGAAGTGGAAATATCGAAAT
GCTATCTCTCGTCAATTGTGGCGTTCATGTCCTGAGGTTAACCAAAATCCGATATGCGAA
AACAAATATTGGAGAATTAGCTTTTTCTTTTTATATTTTCAAAAACAATCTCATCGCTTA
TCCGTTACGACACGTAACTTAAACCGCCGTTGTTGCTCTATCACTTTTCAGCTGCGTAGA
GGATGGAAATAATCCACCGAAATGGTAATATAAAAATGCCGTGGAGTAATTTCATACCCT
ATTACATGCAGTCTATGACTTAAAAACTCTGATCAAGTTGTCTTCAAATTATGAATTATC
TTATCCATTCTAAGCGGTACCCGACTCAAGATTTCGACTCAATTATAGTATTTATTCTGT
ATCCTGGTTTTTAAATTGTTATATATAGCCTCGTTCTAATAGGCACTAACTTTTAATCAC
ACTACTTAGTACGAGAATCTAGAGTGTTGGAGTAATACTGCCAATTAAGATATATGACGA
GATTGAAATCAAAACTTACGTGTGTTTATTAGTTTATATATTATTCTAGTTCCTGTTTTG
ATTACTGTATAGTGTATGACATCATCCTAGCAGAAACTACCTAGCTGAAACTACTCTACA
AGTAGTGTGCTAATTTTAACACTTTTGTCCACCTTCAAGTGTAAAATTTTTCTAATGTTG
CTGATTCATTGTATGGTATATGTTTGGAATCGAAATTTCGAGCTATCCGACGTCGAGGTA
ATCGGCTTTTACCGTGTTTACAATTCAAACAATAGAAGTCAAATCTGAATTTGTCAGTTC
CAGATGTAACAGAAAATTTTTCTTTTCGATTTACAGCAAAAGAATGACATATCGTTCTTC
ATGAAGTCCACACAGATGCCACGAGCATGTATTCAGGGAAAAGTTTTCAGTTCGGTTGGT
GTTTTCTTTTGGTTCACTGAGTTTGCTCCGGTCTTGAAGCGTGTATCCATGTTCACGCCT
TCGTGTCATGTCGGATACTGTTATTGTTTGATTAATAATGTTTGTTTAACATTTAGTGTA
AATAATATTTTTGATGTTTCAAAAGCTTCAAACCCTACATCTTGTGTTGACGAATCCGAA
TTAACCTGCAAATCCGGAGAGTGTATTAATGAAACCTGGTGGTGTGACGGGGACGCGGAT
TGCTCGGACAATAGTGATGAGGAACAATGCGTGCAACCGACATGCAAACCCACTGACTTC
GTTTGCGAAAACAAAGAATGCATTATTGCAGAATGGCGATGTGACATAGACTTCGATTGC
ACCGATGGATCTGATGAAGTTGGTTGTGACGACAAATCCGAGCTTGTGACTGTTGTTATC
GCATCCAATGCCACTTGCCGCAGCGATGAATTTATGTGCAAGGGTAGATATCGGGAGTGC
ATTCTTTTGGCGTACAAATGCGATGGTGATCAAGACTGCCCCGATAACAGCGATGAGAAA
TATTGTAACAACACTTGCTCCATGGAAGATTTTCGCTGCAAGGACGGGCAATGCATTCCT
CTGACATACAGATGCGATAAGTCAGAAGATTGCCATGATGGATCAGACGAACTGGAGTGT
GCCGAAAGAGAAACTCTTATTTGCATGGAAAACGAATTCCGTTGCACGAGCAACCTCTGC
ATTAGCGAAGCTTGGAGATGCGACGGTGACCAAGACTGTGGCGACAATTCCGATGAAGTA
AACTGCAGTGCGTGCGGCAGAGACCAATTCAAGTGCAAGGCAAGTTTAAGATGCATTCGT
CTGTCTTGGAGATGTGATGGAGAGGTTGACTGCATGGATAAGAGCGATGAAATGTTTTGT
GACCGATGTGAAGAAAACCAATACAAATGCAGTGACGGTCAGTGCATCGGAACGCATAAA
TTATGTGACGGTCATGTTGATTGCTTCGATCGTTCAGATGAACCACCAGTAAGGATGTGT
GACAATGTCATGGACAACAATGTCACGAAAAAACTATGTCACAATGGAAATGGTGGTTGC
AGACACATTTGCACAAATACTGTAAATGGACCAGTGTGTTCTTGTAATAAGGGCCATCAG
CTTGGTGAAGATGGAGTTTCATGTGTCGATATTGATGAATGTGCAATCGAAAGTTCCTGC
AGTCATCTGTGTGTTAACAGCAATGGCAGTTACACTTGCTCCTGTCTGTATGGATACGCG
CTTCGTCGCGACGGTAGAACTTGCAAGGCGAGTGGGCCTGAGCCATCTTTGCTCTTTGCA
AACAGAATAGACATAAGAAAGATGCAGCCGGAACGCCATGAGCTAAAACCTGTTTTGCAG
AACCTTAAGAATGCCATAGCACTCGGTAGGGAGCTCATGTTCTGGAGCGATGTCACTTTA
GACTCAATAAAATGCTCGTTCATGAACGGAAGTGCTGTGAGAGAAGTTGTCAGTGTTGGC
CTTGAAAGTCCTGTTGGCATTGCTGTTGATTGGATCCATGACCTGCTCTACTGGACAGAC
TCGGGAACTTCAAAAATAGAGGTTTCAAGTTTAAATGGAGACATGAGGAAAGTCCTCATA
TGGCAGGAATTAGAGAAACCAAGAGCTATTGCTTTACATCCATTAAAAAGTTTAATGTTT
TGGACCGATTGGGGAGTCGTCCCACGTGTCGAAAGTGCTTGGATGGATGGAACAGGAAGA
AGGACCATAGCTTACACTCAATTGTATTGGCCAAATGGACTCACTATCGACTACACGCGA
GATCACGTGTACTGGGTCGACGCGAAGCATCATGTTATCGAACGTGCAGACCTCGATGGT
CAAAACCGTCAAGCCGTCATAAGTAGAGGTTTGCCACATCCATTCGCCATCACAATATTT
GAAGATAAGTTATACTGGACTGATTGGGAAACAAAGAGTATAAGCAGCGCCAACAAGTTC
ACTGGCAGCAGTAGACATACCATCAGAAACCATCTGCATTTCCCGATGGGCATCAAGACG
TACCATCCACTGCGTCAGCCAGAAGGGGAAAACAATTGCAGTCACAGTCGCTGCAGTCAC
TTATGCTTACCAAAACCAGAAGGCTTCACTTGTGTGTGCAAAACGGGTTTTAGAAAAATC
AACTTCACGCATTGTGCTGAAGAAATAGATGAATTTTTGATCTTTGCTAGAAAAAGTGAT
ATCAGGAGAATATCGTTCGATTCCAATGAACTTTCTGACACGGTTGTTCCACTCAGGGAC
ATCAACAGTGCAGTGGCGTTGGACTGGGACAACGACTATGTTTATTGGTCAGACGTTCAG
TTGGACACTATTAATCGTGCTCGATGGGATGGGTCGCAGCAAAGAAAAATCATAGATGCA
AGTCTTGATTCACCTGCCGGATTAAGCATCGATTGGTTCACAAACAAAATTTATTGGACG
GACGCCGGACTCAATCGCATCGAGGTCGCTCTTGTCGGAGGGGCTTTGCGTAGCGTGCTG
ATCTGGGAAAACTTGGATAGGCCAAGAGATATTTTAGTTTTTCCAGAAAATGGACTGTTG
TACTGGACCGACTGGGGAAGGCAACCAAAAATTGAATGTGCCTCTATGGATGGTTCAAAC
AGACATGCCATTGTCAAGAATATGCTGAAGTGGCCAAATGGGCTGGCCTTGGATGAAGAA
GATTTGAGAATATATTGGACAGACGCTGGTCAAAGTACAATCGAATCCTGTCGACTTGAC
GGCAGTGACAGACAACTTGTGTTGAAGAAAAACCTACCTCATCCTTTTGGACTGACCATG
CACAAAGGTCGCGTTTACTGGACCGACTGGACCCTCAATTCGATCCAGAGTGTGAACAAG
CACACAGGGGGAGACCGCAAAATTATTCGAGAAAATTTGGACTATTTGATGGACATTCAG
TATTATCACAAGAATCGTAAAATAACCAACAATCCTTGCAAAGAGAGGAATGGGAACTGT
TCTCATCTGTGCCTGCTCGCTCATCCGGTTGGCGCTCTTCAAACTACTGAAATCTTGCCT
TCTCCTTCCATGTCATGTGCTTGCCCGACTGGTTATGCGTTAAGTTCCGACAGAAAAACA
TGCAGCACTCAAATGACCAAGTTTGTCGTTGTTGCAAGGCGCACAGACATGCGTCTCATC
TCTCTGGATGTTCCGTATCCTGCCGATGTTAAGCTGGATGTCACTGCCGAAATGGTTAAT
GTCATTGCAGTCGATGTAGACGCTGTGAATGAATACATTTATTGGTCCGATGTTGGGTTG
AGTCTAATATCACGAAGTCCTCTGGCAACTCCAGAGCATTCTGAGATTGTTATAAATGAT
GGCTTGGGAGCTGCTGATGGCATTGCCATAGACGAGTATGAAAGAAAACTGTATTGGACA
GACGCTCGAAGGAAGCTGATCGCAGTATCGGAACTTGATGGGAAGCTGCAAAAAGTCTTA
GTGTATGAAGATGTGGATTCTCCCAGAGCTATTGCACTTCATCATGAAATAGGATATTTG
TACTGGACCGACTGGGGTGTGACGGCTAAAATAGAACGCATGGGCATGGATGGAACGAAT
AGATCTGTAATTGTAAATACCGATATAGTTTGGCCGAACGGACTTGCCATTGACCACGAT
GAAAATCTTTTGTTTTGGGCTGATGCACATACTCAGGTTATTGAGTTTTCTGACATGACA
GGGAAACATCGTAAGAAGCTGCCGATAACGGTCCAGCACCCGTACAGCATGTCCGTGCTA
GCGGGCTTGTTATACTGGACAGACTGGCAAACTCGGAACGTCGAAGTGGTGAATTTGCAG
AATTACACAGAGCAGTTCACGATGCGACACAATCTACCCAATTTAATGGGTCTCAAGGCG
GCAACAGTCAACAAATCTTTGATAATGGAGAGAACCAATAAGTATGGCAAATGCAGAAAA
GGAAATAAGTGTTCTCACTTGTGTTTGAGAAGTCCCACTACGGAAAGCGGCTTCAGGTGC
GCCTGTACCACGGGAATTCTCTTGGCGGCTGATGGCAGAAGTTGCAATGAACAGCCAGAG
AACTATCTCTTGTTTACTTCCCGTAACAGCATAAGGAGATTGGCATTAGATTCTGACAAA
AATGTCTATGTACAGCTGCCTGTTACCCAACTGCAAAATGTTATTGCCTTGGATTATCAT
TACGAATTGCAGAAAATATTTTTCACTGACGTGTACCTGGACGTGATACGGTCTGCTGAA
ATTGATGGCACTGATACACATACGTTGATAGAAAGTAACCTAAGAACAATGGATGGGATT
GCTGTTGATTGGATTGCCAATCATTTGTACTGGACCGACACAGGACCAAATGTTATATCC
GTTGCCAAGCTCGATGGAAGTAAAAGAAAAGTCATCATTGATGAGCAGCTGGATGAACCT
CGCGCGATTGTCGTGTCCCCGACGAAAGGAAAGATTTTCTGGACAGACTGGGGAGCTAAA
GCACGCATTGAGAGCGCCTACATGGACGGATCTTCTCGAAAGGTCCTTATATCTAAAGAA
ATAGTATGGCCAAATGGATTGACGCTTGATGGCGAAGGTGAAGGAAGGCTATTCTGGGTG
GATGCTCACAGTTCACTGAGACGAATCGAGTCGTGCGATCTTTTGGGACGTCATAGAACT
GTGCAAGCGTCGCACGTGTCTCATGGTTTTGCCATAACATATATTAATCACAAGCTTTAC
TGGACGGATTGGCAAACGCATTCGATAAGCGTCGCCACGGAATCCAGCTCTTTCAAAAAT
CATTCAGTTCTCATTAAAGATATCGACGGTTTGATGGATATCAAGGCTGTGTCAGCATCT
CATCAGAAGGGAACCAATGCCTGCGATGCCAGGAAGAAATATGGTGGCTGCACCGACCTT
TGTCTGATGCAAGGTGTAAAAAGTTTTGCATGTGTCACAGCGGACGTGTTCAATTCAACA
ATTTCAACTATAGGCATTGTGCCTACAAGCAGCAAACGGCCTACTTTAACCAGTATTAGT
AAAAATACTGTAACACAACCTACGCAAAGTAGTCTGACAACTAGCAGAAATATGAATGGC
GGAGAAACGCCAACATCCAACGGTTCAGAAATACTAGCCTTACTGATCGGTGCGATGATC
TTTGCTGCTGCTCTTGGAATTCTGATCGGAGTGATTGTGTGGAGGCATCTCAACAAGAAG
AAATTGAGACAACAGATCGTGCTAACCTTAGGATACCGAAATGGTGCAAGTCAAGATACT
CTGCTGACTTCAATAGAAAATGTGGAGCACAGAGGAAACCTAACTCAATCACCTATACCA
GAATCCAAGAAACCGTTACTGAATCCGAGTCCGGATGAGGAAATCGAGGATGTAACGGAC
CAAATATCTCAACTGTCAGCATCTTTAGACAACCTCAGTAACTGTAGTGATGCTGTACCG
CAGGAAGATGAATTTAGTGACTCTGAGGTGAATGAAAAAGAGAACTGTGTTTGTAATGAT
AGTGCAGGCAATCAGAATTCCGGAGAACTCGACAGTTATGTAAGTTACCGAGTTCCAAGC
TCGGACGATTTAAAATCCGGGGAAGAACTGGACAGAGATTCATTAAATGTTACTATAATA
TCGTCCGATAACGAAAATGCTTGCGAAACAGATGTAGATTGTAGCTTTAGCGCCAAACTA
ACCAGGCGACCTTTCTACTACTTGGCTGCTTTCATTCATTACTTTTTCTGCAGTCCTAAC
GCACTTATTTTTCTTTGAATGTTCATCTCTGTCTTGGAATAATTTGCCAAAGGTTTGTGC
AGTTAAACTTGAAACAGCCAATGGTACTTTCTGAGATTTACGCCTATCTCTCCTTGTTCG
AGCTTGTCTACTTCAACTGGATGTAATGTATATTTCTCCACTTTATATTGCATTATGCCA
CATTCTTTCAACTCTCAATGAAGAAAAGCAGCATATCATTACTCAATTTCTCTATAAATT
GTATATCTTTGCCAACTGTTTGAATTGCTTTGTGGGTGTAGATTTTTGTTGTCGTTACGA
AATTATCATAATTTATTCACTACTATACCTTGAAATTGAAATCATTTGCACAATCCTTTT
TTACCTAACTAATTGTTGATATGTTTGCAACGTTCAGGCGTTTTTTATTTCGTGATTTCT
TACGATATAATTTATTTTCGAAATGATCTTAAGCAATTGCTGACTTTCATATGATAACTG
TTGTATACTTTTTATACAATAATAAATACAAGTTTTTCT
| PANTHER |
LRP4 (IPR030799) - T[62-174] 0.0 - T[162-1790] 0.0 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[74-111] 13.113 - T[114-150] 12.7 - T[165-203] 12.963 - T[205-241] 13.938 - T[247-283] 13.975 - T[284-321] 12.637 - T[322-361] 12.438 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[74-112] 4.7E-10 - T[114-151] 4.6E-9 - T[165-204] 5.4E-13 - T[205-242] 8.5E-13 - T[247-284] 2.7E-14 - T[285-321] 6.4E-6 - T[322-362] 1.6E-9 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[75-110] 1.3E-8 - T[114-149] 1.9E-10 - T[165-202] 5.9E-10 - T[204-240] 3.0E-11 - T[248-282] 2.0E-12 - T[284-320] 2.1E-10 - T[322-354] 8.4E-9 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[75-111] 2.23E-8 - T[110-149] 1.03E-8 - T[162-202] 3.53E-8 - T[205-242] 6.28E-10 - T[245-282] 6.28E-11 - T[284-320] 9.42E-9 - T[322-365] 2.88E-8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[77-110] 3.74045E-10 - T[115-149] 1.89747E-9 - T[166-202] 2.89012E-9 - T[206-240] 1.39311E-10 - T[248-282] 3.13513E-13 - T[285-320] 4.73007E-10 - T[323-354] 5.25045E-9 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[86-107] 5.0E-45 - T[125-146] 5.0E-45 - T[216-237] 5.0E-45 - T[258-279] 5.0E-45 - T[296-317] 5.0E-45 - T[333-354] 5.0E-45 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[88-110] . - T[218-240] . - T[298-323] . - T[335-360] . |
| SMART |
EGF-like_dom (IPR000742) - T[205-241] 140.0 - T[372-409] 0.55 - T[413-449] 6.4E-5 - T[712-746] 0.057 - T[1012-1062] 0.038 - T[1337-1376] 12.0 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[373-450] 2.67E-12 - T[700-746] 2.67E-12 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[373-409] 0.28 - T[410-449] 1.4E-8 - T[709-746] 0.025 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[410-449] 9.975 - T[709-743] 6.686 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[410-448] 5.3E-7 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[410-433] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[424-435] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[433-448] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[453-750] 4.6E-123 - T[751-1065] 7.5E-111 - T[1066-1372] 3.7E-95 - T[1373-1680] 1.2E-97 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[475-513] 0.38 - T[514-556] 2.1E-14 - T[557-600] 1.8E-9 - T[601-643] 1.1E-14 - T[644-685] 3.1E-8 - T[774-814] 5.0E-8 - T[815-857] 6.5E-10 - T[858-901] 2.7E-10 - T[902-944] 1.6E-13 - T[945-986] 8.6E-6 - T[1091-1133] 1.4 - T[1135-1177] 4.3E-9 - T[1178-1221] 5.3E-13 - T[1222-1264] 1.6E-13 - T[1265-1304] 24.0 - T[1404-1446] 9.6E-5 - T[1447-1489] 3.7E-14 - T[1490-1533] 1.3E-13 - T[1534-1579] 1.8E-6 - T[1580-1619] 0.093 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[491-533] 13.15 - T[534-576] 15.029 - T[577-620] 13.614 - T[621-663] 15.308 - T[664-704] 6.722 - T[792-834] 15.888 - T[835-877] 13.196 - T[878-921] 16.189 - T[922-964] 14.983 - T[965-1005] 6.559 - T[1111-1154] 11.386 - T[1155-1197] 14.287 - T[1198-1241] 16.7 - T[1242-1283] 9.297 - T[1284-1324] 6.234 - T[1424-1466] 13.103 - T[1467-1509] 15.748 - T[1510-1553] 15.911 - T[1555-1581] 7.604 - T[1597-1643] 7.766 |
| Pfam |
LDLR_classB_rpt (IPR000033) - T[492-531] 1.5E-5 - T[535-574] 2.4E-9 - T[578-618] 8.6E-8 - T[622-660] 9.4E-8 - T[662-691] 2.2E-5 - T[792-832] 6.5E-6 - T[835-875] 1.7E-5 - T[878-919] 1.1E-12 - T[923-960] 9.0E-8 - T[1155-1195] 1.2E-8 - T[1198-1239] 1.8E-11 - T[1424-1464] 3.3E-7 - T[1467-1505] 3.4E-10 - T[1510-1550] 2.1E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1_HUMAN | 33.661 % | 874 | 0 |
| LRP4_HUMAN | 50.928 % | 1707 | 0 |
| LRP6_HUMAN | 38.79 % | 874 | 0 |