- Transcript 'Boleac.CG.SB_v3.S228...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S130.g03354.01.t
Possible name(s)
MMP14; MMP16; MMP24
Gene model
Location
S130 [90,728 / 103,942]
Amino acid sequence
Length: 618
>Harore.CG.MTP2014.S130.g03354.01.p
MSISNEIHERRKRQTDSDLSYLVKYGYVSNGALKSNGEVQEQRSLRRAVLELQRFMGLPQ
TGQFDEETRAMMRKPRCANPDRDSVMGDLVRKKRFTTVGSKWKNLRITYSINNFTPKIGK
TATHNAIEDAFRVWASYAPLEFLKVTKDDNPDIVILFATGNHDDNTPFDGEGGFLAHAFY
PGPGIGGDTHFDAEEPWTVNKGPYEGNDLFLVAVHELGHALGLGHSPDTKAIMAPVYKYH
DTTNFRLPQDDIDGIQMLYGVAHRRPDIPIRPTSTSTKAPTTTTTSATRKTSKSTTIRTR
KPYRPYTREPTKQTLSTQLPTTPPPPDVCNLPKYDAVAFLRNELYVFSSQYLWRKGPKDK
KPRGPFPIVSFWSRLSSGVDAAFEKPATGIIVLIKGSYYYEFNGMELERGFPKHVRSMGI
NGADFDAAIWWERNGRIYFFKDDKYWRIHKYAAEKDYPKDIGVWTGIPSSLDAAFTGVGD
DGLNHTYFVKGTQYWTFHNRKVEAVGEPGNFAVDWLGCPAITSSLPRPPNTGVSVPAVAA
VSVVIVMLLLGLTFYIVYQKKQGFKYPPTEAGVVASPYRAGYKTHHTMEDNDIHGRRLWV
KTFHHGWNNLKFSFQQRV
Nucleotide sequence
Length: 1,857
>Harore.CG.MTP2014.S130.g03354.01.t
ATGTCAATTTCAAATGAAATACACGAACGACGAAAGCGACAAACGGATTCAGACCTGAGT
TACTTGGTAAAATATGGATACGTATCCAACGGAGCTTTGAAATCAAACGGCGAAGTTCAA
GAGCAACGGAGTTTGAGGAGAGCAGTTCTAGAGCTGCAAAGGTTTATGGGTTTACCTCAA
ACAGGACAATTTGACGAGGAGACAAGGGCCATGATGCGGAAACCCAGGTGCGCGAACCCC
GATCGCGACTCTGTCATGGGAGATTTAGTGCGTAAAAAAAGATTTACAACCGTCGGGTCC
AAGTGGAAGAATCTTCGTATTACGTACTCGATCAACAATTTTACTCCCAAAATCGGTAAG
ACGGCGACGCACAATGCAATCGAAGATGCTTTTAGAGTTTGGGCGAGTTACGCTCCTTTG
GAATTCCTCAAAGTTACCAAAGACGACAACCCCGATATTGTCATTCTCTTCGCGACGGGA
AACCACGACGATAATACTCCTTTCGATGGAGAGGGCGGGTTTCTTGCCCACGCGTTCTAT
CCGGGACCGGGAATAGGAGGAGACACTCATTTTGACGCCGAGGAACCGTGGACAGTGAAC
AAAGGTCCTTATGAAGGAAACGATTTGTTTCTGGTTGCTGTGCACGAACTGGGTCATGCC
CTCGGTCTTGGTCATTCGCCCGACACCAAGGCAATAATGGCACCTGTATACAAATACCAT
GACACCACCAATTTTCGACTTCCTCAAGATGACATTGATGGCATTCAAATGCTATACGGC
GTAGCACATCGTCGTCCTGATATTCCAATTCGTCCAACAAGTACAAGTACAAAGGCTCCA
ACCACAACGACGACATCAGCAACAAGAAAAACTAGCAAGTCGACAACGATCCGAACAAGA
AAACCATATCGGCCATACACAAGAGAACCAACAAAGCAAACTCTGAGTACGCAATTACCC
ACGACTCCACCGCCTCCAGATGTATGCAATCTTCCCAAATACGACGCCGTTGCATTTCTG
CGGAACGAACTTTATGTTTTCAGTTCACAATATCTTTGGAGAAAGGGCCCAAAGGACAAA
AAACCTCGTGGTCCTTTCCCGATCGTCAGTTTTTGGTCACGACTGAGCTCTGGTGTGGAC
GCTGCTTTTGAAAAGCCCGCGACAGGAATCATCGTTTTAATAAAAGGAAGTTACTATTAC
GAATTTAACGGAATGGAGTTGGAACGCGGTTTCCCGAAGCATGTACGGAGCATGGGTATA
AACGGAGCTGATTTCGATGCCGCTATTTGGTGGGAAAGAAATGGGAGAATATATTTCTTC
AAAGACGATAAGTACTGGAGAATACACAAGTATGCTGCGGAGAAAGATTATCCTAAAGAT
ATAGGCGTGTGGACAGGTATTCCAAGTAGTCTAGATGCAGCCTTCACCGGAGTCGGAGAC
GACGGTCTCAACCACACGTATTTTGTGAAAGGCACACAATATTGGACGTTCCACAACCGC
AAAGTGGAAGCTGTTGGTGAACCCGGGAACTTTGCCGTTGACTGGCTAGGTTGTCCTGCC
ATCACTTCGTCGTTGCCTCGACCACCAAACACTGGCGTTTCCGTCCCTGCCGTCGCCGCA
GTTTCAGTAGTGATCGTAATGTTACTCTTGGGACTTACATTTTATATCGTTTATCAAAAG
AAACAAGGGTTCAAATATCCACCTACAGAAGCGGGGGTTGTAGCGTCCCCTTACAGAGCG
GGATATAAAACTCATCACACAATGGAGGATAACGATATTCATGGGCGGCGTTTGTGGGTG
AAGACGTTTCATCACGGCTGGAACAATCTGAAATTTTCATTTCAGCAAAGGGTGTGA
| PIRSF |
Pept_M10A (IPR021190) - T[2-532] 4.6E-150 |
| Gene3D |
MetalloPept_cat_dom_sf (IPR024079) - T[4-267] 6.9E-87 |
| PANTHER |
MMP15 (IPR028729) - T[16-537] 8.9E-147 |
| SUPERFAMILY |
PGBD-like_sf (IPR036365) - T[20-81] 1.08E-13 |
| Pfam |
Peptidoglycan-bd-like (IPR002477) - T[21-72] 1.0E-7 |
| PRINTS |
Pept_M10A (IPR021190) - T[72-85] 4.9E-40 - T[127-142] 4.9E-40 - T[151-179] 4.9E-40 - T[212-237] 4.9E-40 - T[247-260] 4.9E-40 |
| SMART |
Peptidase_Metallo (IPR006026) - T[98-261] 4.7E-54 |
| Pfam |
Pept_M10_metallopeptidase (IPR001818) - T[101-260] 8.7E-57 |
| CDD |
M10A_MMP (IPR033739) - T[101-260] 4.17907E-75 |
| Gene3D |
Hemopexin-like_dom_sf (IPR036375) - T[321-518] 3.5E-55 |
| SUPERFAMILY |
Hemopexin-like_dom_sf (IPR036375) - T[322-518] 8.11E-52 |
| CDD |
Hemopexin-like_dom (IPR000585) - T[327-518] 1.34888E-48 |
| ProSiteProfiles |
Hemopexin-like_repeat (IPR018487) - T[331-375] 9.507 - T[376-414] 8.201 - T[422-468] 14.476 - T[472-518] 8.286 |
| SMART |
Hemopexin-like_repeat (IPR018487) - T[334-377] 0.26 - T[379-422] 0.0096 - T[425-469] 1.9E-10 - T[471-518] 0.012 |
| Pfam |
Hemopexin-like_repeat (IPR018487) - T[379-420] 2.2E-5 - T[425-469] 1.7E-12 - T[472-504] 1.2E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MMP14_HUMAN | 41.748 % | 377 | 1.07E-123 |
| MMP24_HUMAN | 39.33 % | 371 | 1.62E-120 |
| MMP16_HUMAN | 40.141 % | 373 | 1.04E-121 |