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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.38.v8.A...'
  2. Transcript 'Haaura.CG.MTP2014.S2...'
  3. Transcript 'Harore.CG.MTP2014.S1...'
  4. Transcript 'Boschl.CG.Botznik201...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S135.g15221.02.t

Possible name(s)

MUSK; ROR1; ROR2

Location

S135 [161,727 / 170,405]

Sequences

Amino acid sequence

Length: 1,094

>Harore.CG.MTP2014.S135.g15221.02.p
MARFGQVINNYQHVNHCQRKHTRPPGSANANNFDQKLFEGKCEIYKGYACSQYLKGKYIY
VDSFQTQKQLELHITTAMTILGNKDKVSESCSDYARPAFCHFIFPLCEKVGRTSTYDEEV
DTEYSFEYADSIMEETNLDEEDGKATAIKLCREDCELLKHEVCRKEFTTDDEIVKRIVKA
ADCSKLPKTTAAPMQCTKLGLRQIVDRSINCYNDTGTRYQGVVNLSQTGAKCRPWPSKML
NEYPELAGGHSFCRNPGNTMDQPWCFTDRELIEKEVCTISKCKSPGGTSDLLMILIPCVS
IPLLLGCIMLVMCFVCRNGRKRETKGEAGKKVELRPMSTKRFQVPEIPSTVVHYLLELGE
GKFGKVYKAQILNNMHYCSQVPAAVKTLSAGMTQTQVEEFQREIDVFSDIQHQNVSCLKA
VVLQPVMRCMVFEYTNRVDLHELLTLHSPHSDVGGGKVTSSASSQASSTLEAGDFIHMAV
QIAAGMDYLTSCNFIHRDLAARNILVCNNNVMKISNLGVVRDCYLSSYYRSPQGGHMLPV
RWMAPESLNSNQFSEKSAVWSFGVLMWEMFSYGLQPYCGYNNHEVLEMISRLHTLSCPDQ
CPARMYSLMQEAWGRDPIQRPSFKNLQVKMSGWEGSSTTRMTSQLAQGIHRQLNNVMRDG
GGQFGQYAPPQGTVIDGANFNNPPYITTSPLQPGHPHTSPASHNYYSSPTGTSSSGPIPS
QGNPPSYPNYMQQSYPPQHMFPQPQSHYVRPHPESYPYKSSNTHSSSESCTSSSRNQYQH
AQAYQPQQFQSQHNPNNMPHSQQHFSPNQLNVPQQAPNQRVMMDIPEYENLQRTPDSGVH
STKDNEVIQQQVAGSGGISSNSASSQQNSGYNPSISSRPRPGSEVMMSQVPDVRLQPLSV
YNNSAGGNSAGGDNAPHQFPDKPTVAPKPPMSPPADLVRPRVNIAMGVNGQRNRNHNNHI
ENSNINENERKRLNSNDMHSSQGNSPSRPQSVRKSNHPPSSTPATHLEISDMRKQRNSTT
SGDNINGKAMSCDSGLPGDEPDPEVSASENQPFIAKQPARPPYSMKTPLLLPPGSSSSSV
SGSTAITVDSRLTT

Nucleotide sequence

Length: 3,285

>Harore.CG.MTP2014.S135.g15221.02.t
ATGGCTCGATTTGGCCAAGTCATTAATAATTATCAGCATGTCAATCACTGTCAACGGAAG
CACACTCGTCCACCAGGTTCCGCAAATGCTAACAACTTTGATCAAAAACTGTTCGAAGGA
AAATGTGAGATCTACAAAGGATACGCCTGTTCTCAATATCTTAAAGGGAAATATATTTAC
GTTGATTCATTTCAAACTCAGAAGCAACTTGAGCTGCACATCACTACAGCAATGACTATA
CTAGGTAATAAAGACAAGGTGTCCGAAAGCTGTAGCGACTATGCTCGCCCTGCTTTCTGC
CATTTCATTTTCCCTCTCTGCGAGAAGGTGGGCCGAACTTCAACCTACGACGAAGAAGTA
GACACTGAATACAGCTTTGAGTACGCCGATTCGATAATGGAAGAAACTAATTTGGATGAA
GAAGACGGCAAAGCAACTGCGATTAAACTATGTCGCGAAGATTGCGAATTGCTCAAACAT
GAAGTTTGTAGGAAAGAGTTCACAACAGATGACGAAATTGTGAAGCGAATTGTGAAAGCA
GCCGATTGTTCTAAACTTCCGAAAACAACCGCAGCTCCGATGCAGTGCACGAAACTTGGT
CTGCGGCAAATTGTGGATCGCAGCATCAACTGCTACAATGATACTGGTACTAGGTATCAG
GGAGTCGTAAACTTGTCACAGACAGGAGCTAAATGTCGACCTTGGCCATCAAAAATGCTG
AATGAGTACCCAGAACTTGCTGGTGGGCATAGTTTTTGTCGCAATCCAGGAAATACAATG
GATCAGCCTTGGTGTTTCACAGATCGTGAATTGATAGAAAAAGAAGTGTGCACCATCAGC
AAATGCAAATCACCTGGTGGAACTTCAGATCTTTTGATGATTCTCATCCCGTGTGTCAGC
ATACCACTTCTCCTCGGTTGCATCATGCTTGTCATGTGCTTCGTTTGTAGAAATGGAAGA
AAGAGGGAAACTAAGGGAGAGGCCGGTAAAAAAGTTGAACTGCGTCCAATGTCAACTAAA
AGGTTTCAAGTACCTGAAATTCCATCAACTGTTGTTCACTATTTGTTGGAACTCGGCGAA
GGAAAATTTGGAAAAGTGTACAAAGCTCAGATCCTCAACAACATGCACTACTGTTCTCAA
GTGCCGGCGGCTGTCAAGACCCTTTCTGCTGGAATGACGCAAACACAAGTAGAAGAATTT
CAGAGAGAGATTGATGTCTTTTCAGATATTCAGCATCAAAATGTTTCATGTTTGAAGGCT
GTTGTTCTTCAACCTGTTATGCGCTGCATGGTGTTCGAGTACACAAATAGAGTAGACCTT
CATGAACTCCTCACCCTCCATTCTCCTCACTCGGATGTGGGAGGTGGCAAAGTTACAAGC
AGTGCCAGCAGTCAAGCATCAAGTACCCTTGAAGCAGGAGATTTTATTCATATGGCAGTT
CAAATTGCCGCTGGCATGGACTATCTGACAAGCTGTAACTTCATCCACCGAGACCTGGCA
GCACGTAACATTCTTGTATGCAATAATAATGTTATGAAAATTTCAAACCTCGGAGTGGTC
CGTGATTGTTATTTGTCGAGCTACTACAGGTCTCCACAAGGAGGTCATATGCTACCAGTT
AGATGGATGGCACCAGAGAGTCTCAACAGCAATCAATTCTCAGAAAAAAGTGCAGTTTGG
TCATTTGGTGTATTAATGTGGGAAATGTTTAGCTATGGTCTGCAACCATATTGTGGCTAC
AACAACCATGAGGTGTTGGAAATGATTTCAAGGTTACATACTTTGTCATGCCCCGATCAA
TGTCCAGCTCGTATGTACTCACTGATGCAGGAGGCATGGGGAAGAGATCCGATACAACGA
CCAAGCTTCAAGAATCTACAAGTAAAGATGTCTGGTTGGGAAGGTTCGTCAACTACGAGA
ATGACATCACAGCTGGCTCAAGGAATTCATAGACAATTGAATAATGTCATGAGAGATGGT
GGAGGACAATTTGGGCAATATGCCCCTCCTCAGGGGACTGTAATTGATGGAGCTAATTTC
AACAACCCTCCGTACATCACCACATCACCTCTTCAACCTGGACATCCTCACACCAGCCCC
GCTTCACATAATTACTATTCATCACCCACCGGGACTTCCTCTTCTGGGCCGATTCCCAGC
CAGGGGAACCCTCCCTCATACCCAAATTACATGCAGCAGAGCTATCCACCACAGCATATG
TTTCCTCAACCCCAAAGTCATTATGTTCGGCCTCATCCCGAGTCATATCCATACAAATCG
AGCAACACACACAGCAGCAGTGAGAGTTGTACTTCTTCGAGTCGTAATCAATACCAGCAT
GCGCAGGCATACCAGCCTCAGCAGTTTCAAAGCCAGCACAATCCGAATAATATGCCACAT
TCTCAGCAACATTTTTCGCCTAATCAGCTTAATGTTCCACAGCAGGCTCCCAATCAAAGA
GTCATGATGGATATTCCAGAATATGAAAATCTTCAACGTACTCCTGATAGTGGGGTCCAC
AGTACCAAGGATAACGAGGTCATCCAGCAACAGGTTGCGGGAAGCGGAGGTATATCATCA
AATTCTGCTAGCTCTCAACAAAATTCCGGTTACAATCCGTCCATCTCATCCAGGCCTAGA
CCGGGAAGTGAGGTAATGATGTCTCAGGTCCCTGATGTCAGGTTGCAACCCCTTTCGGTT
TATAACAATTCAGCGGGCGGTAATTCTGCAGGTGGTGATAATGCACCGCATCAATTTCCG
GACAAACCAACTGTGGCTCCTAAGCCACCTATGTCCCCCCCAGCAGACCTCGTTCGTCCC
CGTGTTAACATAGCAATGGGTGTTAATGGACAAAGAAACAGAAACCATAACAATCATATA
GAAAATAGTAATATTAATGAAAATGAGAGAAAGAGACTCAACAGCAATGATATGCACAGC
AGTCAGGGTAATTCGCCCTCCAGGCCACAGTCTGTACGTAAGAGCAACCATCCACCCTCC
TCCACCCCTGCCACCCACCTAGAAATCTCTGACATGCGCAAACAGAGAAATAGCACTACT
AGTGGTGACAACATTAATGGAAAAGCAATGTCATGCGATTCTGGATTGCCAGGTGACGAG
CCTGATCCTGAAGTATCAGCCAGCGAAAATCAGCCTTTTATTGCTAAACAGCCTGCACGT
CCGCCGTACAGTATGAAGACTCCCTTACTTCTTCCTCCTGGATCATCATCATCTTCCGTT
TCTGGGTCGACTGCCATCACTGTCGACTCCAGATTAACAACATGA

InterProScan

ProSiteProfiles
Frizzled_dom (IPR020067) - T[37-199] 14.556
Gene3D
Kringle_sf (IPR038178) - T[201-286] 6.3E-17
SUPERFAMILY
Kringle-like (IPR013806) - T[209-287] 5.32E-22
SMART
Kringle (IPR000001) - T[209-284] 9.7E-19
ProSiteProfiles
Kringle (IPR000001) - T[210-282] 15.107
Pfam
Kringle (IPR000001) - T[211-282] 6.4E-14
ProSitePatterns
Kringle_CS (IPR018056) - T[252-265] .
SUPERFAMILY
Kinase-like_dom_sf (IPR011009) - T[344-626] 3.37E-64
SMART
Tyr_kinase_cat_dom (IPR020635) - T[352-630] 2.6E-95
ProSiteProfiles
Prot_kinase_dom (IPR000719) - T[352-634] 31.58
Pfam
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[356-628] 7.9E-78
ProSitePatterns
Protein_kinase_ATP_BS (IPR017441) - T[358-386] .
PRINTS
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[488-506] 1.1E-26 - T[538-548] 1.1E-26 - T[557-579] 1.1E-26 - T[601-623] 1.1E-26
ProSitePatterns
Tyr_kinase_AS (IPR008266) - T[494-506] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ROR1_HUMAN 35.559 % 466 7.56E-148
ROR2_HUMAN 37.231 % 455 8.6E-144
MUSK_HUMAN 37.063 % 206 1.04E-54