- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S136.g06573.03.t
Possible name(s)
PTPRA; PTPRE; PTPRZ1
Gene model
Location
S136 [214,475 / 224,311]
Amino acid sequence
Length: 1,024
>Harore.CG.MTP2014.S136.g06573.03.p
MVIKLLMILGVLGLVRANISGRSTENCNHNIVTNGQSVQSNARLECERLGGSLAIIKDAS
TTNVIIGVANGGTDYWIGGSFELIQNFNVSTIACNVTKVHLNWTNDMLIPVNLQPFIRYG
IIVKDTNDSLIHESRESIKVGSQDIKALEENTTYIVTLIARSDICGGQVNMTSTETVTTP
YGIPHEPRNVTVISKSPSVDTCSVKWNKPDSPPLDLIQSFTIIALGEIVNSRNSSFKYRT
NATFTLTNFTNEGNTTTIFNDAGNEVIIGNGTNATSAMFNYALNLQPNNKYTFQIFAISC
AGDGIRANATGLCQTDTAAPINISIPQLAAESKTTLRFTLPSLNEERGLISCIFVVVGIY
KEPSNLPEITSASSIRSLATTEGYVALAIKYTGSEISETLGDNTTSTCTLYDQNQDPEVI
QAINHPLIFNETYKIYYIAAVATAQGIQFSTSQAETITTREPPITTDGNTVTNSGRSTEN
ITLSLVGASVALTAILLIVLAVLLVRRKKRTSKKKVVSPQRPFVANYTRKNNSKPKKVAT
EGIPLSRFENTYKNLLANNSKGFQTLFQGIMTEIEGKELPHTDHTLVENKSKNRYKNIYP
FDHSRVILEQTEESNGYINAAYIDGNSLPNKYIATQGPKKNTVHDFWRMIWEKNVNFIVM
LTKCIEKKKEKSFKYWPVAGTKVTFGDVTVFTREEAEYGGYWRRVIIITHSDTGIGLPRE
IIQFHMVKWPDHGVPVSTSNMLRLYNHVIHETQASTTTYDNVGPLLVHCSAGVGRTGTFI
ALDILSEQMTKSDQVNVRDCVLNMRMSRTEMIQTLDQFIFLHKLILEINLLPQCEMTPDD
FQNNVRDPERLQKEFNFLDRVPPVKISSKIAFENRKKNRDQNCVPYDKNRVFIQVLSDET
NVPYVNASYIQNYVNGFKIITAQEPLVGDEEYFWRMVWDNDVRVLIRMSGKNICQSYELD
FKSWNDVSELPPPTNLLQMITKMTSLAQNEPQVLVSCEAEFVGGKGGNYRSEGPHKHPVI
SLRS
Nucleotide sequence
Length: 3,075
>Harore.CG.MTP2014.S136.g06573.03.t
ATGGTGATCAAGTTATTGATGATTCTCGGTGTTCTTGGATTAGTACGAGCCAACATAAGT
GGAAGGAGTACGGAAAATTGTAATCACAACATTGTCACAAACGGTCAGTCTGTTCAGAGC
AATGCAAGGTTAGAGTGTGAACGCTTGGGAGGTTCACTCGCTATCATTAAAGATGCATCG
ACAACAAATGTCATCATTGGTGTGGCGAATGGTGGAACTGATTACTGGATTGGAGGAAGT
TTTGAGCTTATTCAGAATTTCAACGTCTCTACTATAGCATGCAATGTTACAAAAGTTCAT
CTGAATTGGACAAACGATATGTTGATACCAGTAAATCTCCAGCCATTCATTAGATACGGA
ATAATTGTAAAGGACACGAATGATTCATTGATACATGAATCACGGGAATCAATAAAGGTT
GGCTCCCAGGATATCAAAGCCCTAGAAGAAAACACAACTTACATTGTTACGTTAATAGCA
AGATCAGATATTTGCGGAGGGCAAGTAAATATGACATCTACAGAAACTGTTACAACTCCA
TATGGAATTCCTCATGAACCCAGGAATGTTACAGTGATAAGCAAATCACCGTCTGTAGAC
ACTTGCTCAGTTAAATGGAATAAACCGGATTCACCTCCACTGGATCTTATACAATCATTT
ACGATAATAGCTCTGGGCGAGATAGTCAATTCCAGGAACAGTTCATTCAAATATAGAACG
AATGCAACCTTCACCCTGACTAACTTTACCAACGAAGGAAATACAACCACTATATTCAAT
GATGCTGGGAATGAGGTCATCATTGGGAACGGGACAAATGCTACTAGTGCAATGTTCAAC
TATGCACTGAATCTTCAACCAAATAACAAATACACCTTCCAGATATTTGCAATTTCATGT
GCTGGTGATGGAATTAGGGCAAATGCAACAGGACTCTGTCAAACGGATACAGCAGCGCCT
ATCAACATTTCTATACCTCAGTTAGCAGCTGAATCTAAAACTACTTTAAGATTTACACTA
CCATCACTGAATGAAGAACGAGGTTTAATCAGTTGTATTTTCGTCGTTGTGGGAATATAT
AAAGAACCGAGCAACCTGCCAGAAATTACTTCAGCATCCTCGATTCGGTCTCTAGCAACA
ACGGAAGGATACGTCGCACTTGCAATCAAATATACAGGGTCTGAAATATCGGAAACATTG
GGAGATAATACAACATCTACTTGTACTCTGTATGATCAAAACCAAGACCCGGAAGTAATT
CAAGCCATCAACCATCCTTTGATATTTAATGAAACATATAAAATCTACTACATAGCTGCA
GTTGCAACTGCACAAGGGATTCAATTTTCCACAAGTCAAGCTGAAACAATAACTACAAGA
GAACCACCTATAACAACAGATGGAAACACAGTAACGAATAGCGGAAGATCAACAGAAAAT
ATTACTTTATCACTAGTTGGTGCTTCTGTTGCACTAACCGCGATACTACTCATAGTTTTG
GCTGTTCTCCTTGTAAGAAGGAAAAAGCGGACTTCAAAAAAAAAGGTGGTGAGCCCCCAA
AGACCTTTTGTAGCGAATTACACACGAAAAAACAATTCAAAACCGAAAAAAGTGGCAACT
GAGGGAATTCCTCTCTCGAGATTTGAAAACACCTACAAGAATTTATTGGCAAATAATTCG
AAAGGATTCCAAACTCTATTTCAGGGAATAATGACCGAAATAGAGGGTAAGGAACTTCCA
CACACTGATCACACCTTGGTGGAAAATAAATCGAAAAATAGATACAAGAACATTTATCCT
TTCGATCACTCCAGAGTAATTTTGGAACAGACAGAGGAAAGCAACGGTTATATTAATGCT
GCATACATTGATGGGAATTCCCTCCCAAACAAATACATTGCGACTCAGGGACCAAAGAAG
AATACAGTGCATGATTTCTGGAGAATGATTTGGGAGAAAAATGTCAATTTCATTGTAATG
CTGACTAAATGTATCGAGAAGAAGAAGGAAAAGAGTTTCAAGTATTGGCCTGTTGCTGGA
ACTAAAGTTACGTTTGGTGACGTCACTGTATTTACACGAGAAGAAGCTGAATATGGAGGA
TACTGGAGAAGAGTGATTATAATAACACACAGCGATACTGGGATTGGATTACCACGAGAA
ATAATTCAATTTCACATGGTTAAATGGCCTGATCATGGAGTTCCTGTATCAACATCAAAT
ATGCTTCGTTTGTACAATCATGTCATTCATGAAACCCAGGCATCAACAACGACATACGAC
AATGTTGGACCACTCTTGGTGCATTGCAGTGCTGGAGTTGGACGTACTGGAACTTTCATT
GCATTGGACATACTGAGCGAACAAATGACAAAAAGTGATCAAGTCAATGTTCGAGATTGT
GTTTTGAATATGAGAATGAGTAGAACGGAGATGATTCAAACGCTTGATCAATTCATTTTT
CTTCACAAGTTAATCTTGGAGATCAATCTTTTGCCTCAATGTGAAATGACACCGGATGAT
TTTCAAAACAATGTTCGGGATCCGGAAAGACTACAAAAGGAATTCAATTTCCTTGATCGT
GTACCACCAGTGAAGATCTCAAGTAAGATTGCATTTGAGAATCGAAAGAAAAATCGAGAT
CAAAACTGCGTCCCGTATGACAAGAACCGAGTGTTCATTCAGGTATTGAGCGATGAGACC
AACGTTCCATATGTTAACGCTTCATACATTCAGAATTATGTGAACGGATTTAAAATCATA
ACTGCACAAGAACCGTTAGTTGGCGATGAGGAGTATTTCTGGAGAATGGTTTGGGACAAT
GATGTACGAGTTCTAATCAGAATGAGTGGAAAGAACATATGTCAATCGTACGAACTGGAC
TTCAAATCATGGAATGACGTCAGCGAGCTCCCACCACCAACTAACTTGCTTCAGATGATT
ACGAAAATGACGTCATTGGCACAAAACGAACCACAAGTACTAGTTTCTTGCGAGGCCGAA
TTTGTAGGAGGGAAAGGGGGTAATTACCGGTCAGAGGGTCCCCATAAGCACCCCGTGATA
TCCCTTAGGTCCTGA
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[39-87] 7.26E-6 |
| SMART |
FN3_dom (IPR003961) - T[83-168] 41.0 - T[184-304] 0.0032 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[88-225] 2.67E-14 - T[261-306] 2.67E-14 |
| Gene3D |
Ig-like_fold (IPR013783) - T[169-323] 5.6E-9 |
| CDD |
FN3_dom (IPR003961) - T[184-304] 0.00180164 |
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[531-829] 1.1E-97 - T[831-958] 5.8E-22 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[542-827] 1.84E-91 - T[846-998] 4.57E-27 |
| SMART |
PTPase_domain (IPR000242) - T[562-830] 2.4E-103 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[563-828] 49.362 - T[851-957] 16.196 |
| Pfam |
PTPase_domain (IPR000242) - T[589-827] 3.7E-75 - T[874-948] 8.9E-18 |
| PRINTS |
PTPase_domain (IPR000242) - T[616-623] 8.4E-33 - T[632-652] 8.4E-33 - T[719-736] 8.4E-33 - T[764-782] 8.4E-33 - T[795-810] 8.4E-33 - T[811-821] 8.4E-33 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[720-827] 2.4E-35 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[739-819] 18.974 |
| ProSitePatterns |
Tyr_Pase_AS (IPR016130) - T[767-777] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRA_HUMAN | 32.847 % | 248 | 1.53E-69 |
| PTPRZ_HUMAN | 32.821 % | 256 | 5.59E-70 |
| PTPRE_HUMAN | 36.62 % | 245 | 2.76E-69 |