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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S13.g04667.02.t

Possible name(s)

PDE6D; UNC119; UNC119B

Gene model

Harore.CG.MTP2014.S13.g04667

Location

S13 [449,665 / 452,799]

Sequences

Amino acid sequence

Length: 147

>Harore.CG.MTP2014.S13.g04667.02.p
MQDKSAQIMEGFTLNWMNLRDAGTGKILWQGSDDLSRPGQEHEARVPKKILKCKAVSREI
NFSSKKSMDKFRLEQKVIFRGRVLEEWYFQFGFVIPDSTNTWQSTIEAAPQGQMMPAHVL
SGNVVIETNFYDEDALVSQSRVRVFYV

Nucleotide sequence

Length: 2,203

>Harore.CG.MTP2014.S13.g04667.02.t
AGATTAACTGAATAGTTAAAATATTTTGACGAAAATGCAAGACAAATCTGCTCAGATAAT
GGAGGGGTTTACTCTGAACTGGATGAATTTACGGGATGCAGGCACAGGAAAAATTTTGTG
GCAAGGGAGCGATGATTTATCAAGGCCAGGGCAAGAGCATGAAGCACGAGTTCCAAAAAA
GATCCTGAAATGTAAAGCAGTCTCTCGTGAAATCAATTTTTCATCAAAGAAATCTATGGA
TAAATTTCGCCTGGAACAGAAAGTAATATTTCGTGGACGTGTTTTGGAAGAATGGTATTT
TCAATTTGGTTTTGTAATACCTGACTCAACAAACACCTGGCAATCTACAATCGAGGCAGC
GCCGCAGGGCCAGATGATGCCAGCTCATGTTTTAAGCGGAAATGTGGTGATAGAAACCAA
TTTTTATGACGAAGACGCCTTGGTCAGTCAATCTCGTGTAAGAGTTTTCTATGTATAAAA
AATACGATGAGTTGAATACGTCAGAAATCCAATCCCACTCCGCACTAATAAAGGGCTGAT
CCTCATTCTGAATAGTTCTAAGTTGTTCGAAATTTTATGATCTGTGATATTTCAAATGCT
TGTATCCAGAACTGACTAGTAAAAGTTTTACTTTAGACAAAAATATTATACATTATCAGC
TCTCGACCCCGCATTCAACACTGTTTTTAATGAAAGTTGAGTGTTGACGTGATGAGATAA
GAAGCAATTGAATATAAGTTTTGTTTTATATCCTGCGGTGATATAGTCGTTGAGCAGTAT
AGGTACTGTTGACCCTTGACCCTTCTCCCGAACTAATTGGGAGGAAATATCAATCTGGAA
ATGAAGAAGTTTGAAAATCTGTCGTGAAAAATAACGTAGTCCCTAAATGTACGAAAACAA
TAAACTGTATACATAACCACTGCATAATAATATAATAGTGTAACAACAATACACCGACAC
AATATATAATTTGGTGGATTGACTGAGAAAGGGGTTACCATGATCATATAATATGAATGA
ATAAGCGTCCGGAAAACCGATGGGTCAACAGTACATCACTAATTGACTATATCTTTTTTT
TTCTGCAAAGCTCCGCTTGTTTGGGAGCATTTTATAGATGAGATTATAATTAAAGTTAAG
CGATCAAAATGCAACAGCAGTTGAACCGCACTATGTTTGGTGTCAGTGAGCTCTACTGGT
TGTGCAAACTTGGTCGGGATTAAAGTCCTCTTTGAAAGGGGGAGGGAGCCCACGAATCTG
CTAGAAAATGGGTGATGCACCTTTTTTGCATACTAATATATTGAGCAGAGCAAGTTTCTA
TCAACCGCTGATATAACTTTCATTTTTATACCTCTTATTGTGGATTTTATTAGATTTAGG
ATGTTGCACACTGTATTACACTAAAAATCTTGAACTACTGTATATAACAAAGTAAACTTC
ACTTAACTGAACAAAATAATCCGCTTGCTAGAAATAAAAAAATTCATTCACCTTAATAGT
GAATTTCACCATAAAGTAGAAATTTTGTAATTTTCCCACTGTTAATTTTTGATTGTTTCA
TTTTGTGGTTGGATTAGTTGTGGGTACCTTTATGCTTCCACATTTACCCAAGTGTTTTAC
TTAAATAGACATTAACATTGAAACCGGTCAGCTTGACATATTAGTAATGTTAATATATAC
CATAACATTACCAGGAACTGAGTTTTAAAAATGCTACATGTTCAGCCATACCGTGTTCGA
GAAAATTTGCAGGCCTCTCGAACTTTGTAAGCGACTTGCATTTCATCCAACTCAAAAACC
ATTATATTTTTAATATCTTTAATTCATCCCAATTTGACAGTTTTTTGGAGTCGAAACAAA
TTGTTTGATTCTGATTATCCTATGGCACTGAGAATTTGTGCAATAGTATTTAATGATTGT
ACAAGAGCTTTCTGACATCCGAGACTACTTGTTTCAGGTATACTTTCCCCCTGAGCATTC
CTTTAATGGGCAACTCTTGTCCGATGTACTTCCTGCCTATTTACATTAACGTGTAACATT
TAAAGCCAATGATTAGATATATTTTTATAAAGCTTGTGGTAATTCTATGGTGCTTTGTTA
CTTATTTGTGTCTATACTATGTCTACTATACAAAATACAGTATACAATACTACGTATGTC
TTGTTGACAGTGAATCGCGCTTAAATAAAGTATGGTAAATGAA

InterProScan

Gene3D
PDED_dom_sf (IPR037036) - T[1-147] 3.1E-71
PIRSF
Rhodop-sen_GMP-Pdiesterase_dsu (IPR017287) - T[1-147] 2.4E-74
SUPERFAMILY
Ig_E-set (IPR014756) - T[3-147] 2.66E-48
Pfam
PDED_dom (IPR008015) - T[7-146] 1.0E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PDE6D_HUMAN 74.483 % 239 9.74E-83