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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S13.g04966.01.t

Possible name(s)

Harore.CG.MTP2014.S13.g04966

Location

S13 [216,720 / 223,010]

Sequences

Amino acid sequence

Length: 1,278

>Harore.CG.MTP2014.S13.g04966.01.p
MESSLSNVSGATMAADVINYRTKQIGENTLVLKESAEKNSAYMANMVLPEIVQSSRAYPL
GPDCVITHTECKDPSLMTNMDLYWYISLEKGCVECKIKHNELTNSTTTTDPRCIITRKPR
RFEAYCCTFCRSNFVTVVQALLHMKAFHRQKMKIFIQDQNVFHDIEKAMEVPPVPLPWYA
AKKIFSPIPNTSQNRNSSEYESISIMPSTGDSTEQIVTSTGENNPVTNLLQAIVKEYGKQ
VHTALFGKDFCDVKVQFEDKSVVIAQLPEMISQEASIVEANEDIKEKLEFRVERLVEENG
IETCIVTVNQPALARHLIVSALKQGVSENSGGAIATLDKTEEDQVDEKEANQKPVNEILP
SKDTSARNMEENIPTSQVKLDSRGRPSKTVRFTMGSPDDDEDDNSSVGEKSGWSEQEENK
ETGSEQLSDELKKPKEDEGLQGVVNQLISTASNCNLIPVDPTSPVSTASSMPLPNVREEI
LATAAMHVRSLPKNLSSPNLVMITHANSAIRKSLIPSSVTPVSGMSRAQSWAGKANADTS
QNFTLSTYPRSTSPSFDHLPRADQRKFLTGGRAFTYAEKIRLMKMLNDQDSAITEKHIRR
GLVAETSVNMTNTSTSTTMVSSSMPEKSRSSSSSSSLSSGGDSAKVVNSELSIQTPLKDG
ASSVMIGVKRKKNEWITEGRKKRKSKYDVPQFVQTESKTSLSKEMKKPTSDSSASDNDEK
DTNENEQTEEGDNPPTLLNVMRSAYPAFLASHSGIFSGPTSSHIPTGYPAMLSSEYYGSG
EWANAAMQTLRSLQSTIELQAAVAAAASSGGDSSLQSKKLDKVKNEPAESRQPCANSVTD
ELENPVFDETEDDFLTANDSTETQSHTEDTILTLANQITNEKSKLLVSQNSQRFRSLSPV
SSHRVRADSHNSKSFRSDKIKDPKEKLKKLEIRSASDSNLKKRSIVSAVGSSAGIAQKGD
LLEFLQNLTEESLLDDDVLLLKFHKKGSLNEDQSSNVDMPQIFQNSVETCMKVKYIEKIS
ICRVCGYQITLSDESHSGVMKSHVMEHSLKELLQTGSNVELKLKPIKQNMTETNHDSKYV
KSRNRKQQRPKPIRLATPSGSKIGNNLLQRENANHAVSHCYNLTGFDCDFIIFADILVLT
ILACSFFVVTTKHKRNNNVCIRYVVLPGKLRIYYINELETEDSYSDSKISAFKPQKYENL
VGINRDGIVENVCERSNSSCFGNSLYSIQEFLLFPSTCCHGRMPHTSATWSWSAGSCCTY
GRLQLTVVDSSLLFAFET

Nucleotide sequence

Length: 3,837

>Harore.CG.MTP2014.S13.g04966.01.t
ATGGAGTCTTCTCTTTCCAATGTCTCTGGTGCTACAATGGCAGCTGATGTAATAAACTAC
AGGACGAAACAGATCGGCGAGAACACTCTGGTGTTGAAGGAAAGCGCGGAAAAAAATTCT
GCGTACATGGCAAACATGGTCCTCCCTGAAATAGTACAGTCATCCAGGGCGTATCCTCTC
GGACCAGACTGCGTCATTACACACACGGAGTGTAAGGATCCTTCACTTATGACTAATATG
GACTTGTACTGGTACATCTCATTGGAGAAAGGATGCGTGGAATGTAAAATAAAACACAAC
GAATTAACCAATTCAACCACCACAACGGACCCTCGGTGCATAATTACTCGAAAACCACGT
AGGTTTGAGGCTTATTGCTGCACATTTTGCCGATCCAACTTTGTCACTGTCGTTCAAGCC
CTCTTACACATGAAAGCATTCCACAGACAAAAGATGAAAATTTTCATCCAAGACCAAAAT
GTTTTTCATGACATTGAAAAAGCTATGGAGGTGCCTCCTGTCCCACTGCCGTGGTATGCA
GCAAAAAAGATCTTTTCTCCTATCCCTAACACATCACAGAACAGAAATTCCTCGGAATAC
GAGTCGATTTCTATAATGCCATCAACAGGTGACAGCACAGAGCAAATTGTTACCAGTACT
GGCGAAAACAACCCAGTAACTAACTTATTACAAGCGATTGTCAAGGAATATGGCAAGCAA
GTGCACACCGCTCTCTTTGGTAAAGATTTTTGTGATGTTAAAGTTCAATTTGAGGACAAG
TCTGTTGTAATAGCACAACTTCCTGAAATGATCAGCCAGGAAGCTTCAATTGTAGAAGCA
AACGAAGACATCAAAGAAAAATTGGAATTTCGTGTAGAAAGACTCGTAGAAGAAAACGGC
ATCGAGACATGCATTGTTACAGTTAATCAACCTGCTTTAGCACGTCATTTGATTGTTTCG
GCACTGAAGCAAGGAGTCAGTGAGAATTCTGGTGGAGCTATTGCCACATTGGATAAAACA
GAGGAAGATCAAGTTGATGAGAAGGAAGCGAATCAAAAACCTGTCAATGAAATTCTTCCT
AGCAAAGATACATCAGCACGAAACATGGAAGAAAATATTCCAACGTCTCAAGTAAAGCTA
GACAGCAGAGGAAGGCCAAGCAAAACCGTCCGATTCACGATGGGAAGTCCTGACGATGAC
GAAGATGACAACAGTAGTGTCGGAGAAAAGAGCGGTTGGTCAGAACAAGAAGAGAATAAG
GAGACTGGATCGGAACAATTATCAGATGAATTGAAAAAACCGAAAGAAGATGAAGGTTTG
CAGGGAGTTGTCAACCAACTCATATCAACAGCTTCAAATTGCAACCTCATTCCAGTCGAT
CCTACATCACCCGTTTCTACCGCTTCATCTATGCCTTTGCCAAATGTACGTGAAGAAATT
CTCGCGACCGCAGCCATGCACGTTAGATCACTGCCAAAAAATCTCTCTAGTCCTAACTTA
GTTATGATCACGCATGCAAATTCCGCCATTAGGAAGTCACTAATACCTTCTTCCGTTACA
CCAGTTTCTGGAATGAGTCGAGCTCAGTCTTGGGCTGGCAAAGCGAACGCCGATACATCT
CAGAACTTCACTCTGTCCACGTATCCACGGTCTACCTCACCCAGTTTCGACCACTTGCCA
AGGGCAGATCAACGAAAATTTCTCACTGGTGGCCGAGCATTTACATATGCTGAAAAGATC
AGGCTCATGAAAATGCTAAACGATCAGGACAGCGCTATCACCGAGAAACATATTCGCAGA
GGTTTGGTAGCAGAAACATCCGTCAATATGACCAACACATCAACATCAACAACGATGGTT
TCTTCAAGCATGCCAGAAAAATCTAGAAGTTCTTCATCATCAAGTAGCCTGTCAAGTGGT
GGTGATAGTGCAAAAGTTGTCAATTCTGAACTAAGCATCCAGACACCATTAAAGGATGGT
GCTAGCAGTGTGATGATAGGTGTCAAAAGAAAGAAGAATGAATGGATAACTGAGGGCAGG
AAGAAAAGGAAAAGTAAATATGATGTTCCACAATTTGTGCAAACTGAAAGCAAGACTTCG
TTATCTAAAGAGATGAAAAAACCGACTTCAGACAGTTCCGCATCTGACAATGACGAAAAG
GATACAAATGAAAATGAACAAACAGAGGAAGGGGATAATCCTCCAACGTTGCTAAATGTC
ATGAGGTCTGCGTACCCGGCCTTTCTAGCTTCGCATAGCGGCATCTTTTCTGGTCCAACG
AGCTCTCACATTCCAACCGGATACCCCGCCATGTTATCGTCAGAATATTATGGATCCGGT
GAATGGGCGAACGCTGCCATGCAGACATTACGGAGTCTGCAGTCAACCATAGAGCTTCAA
GCGGCAGTCGCTGCTGCTGCGAGCTCTGGTGGCGACTCAAGTCTACAGTCAAAAAAGCTT
GATAAAGTGAAAAACGAACCTGCTGAAAGCCGACAGCCTTGCGCTAATAGCGTGACTGAT
GAACTAGAAAACCCAGTTTTCGACGAAACGGAAGATGACTTTTTAACAGCAAACGACTCG
ACAGAAACGCAGTCTCATACGGAAGATACTATATTGACTCTGGCTAATCAGATCACGAAT
GAGAAAAGCAAACTGCTAGTGTCGCAAAATTCTCAGCGTTTTAGATCACTCTCACCAGTT
TCGAGCCACCGAGTTCGCGCGGACTCGCATAATTCCAAATCTTTTAGGTCGGACAAGATA
AAGGATCCGAAAGAAAAACTGAAAAAGTTGGAAATCCGTTCAGCATCCGATTCCAATTTG
AAGAAAAGGTCCATAGTGTCCGCAGTGGGGAGCAGCGCTGGCATAGCGCAGAAAGGGGAT
CTCCTAGAATTTCTTCAAAATCTTACAGAAGAATCTCTTCTCGATGATGACGTATTATTG
TTAAAGTTCCATAAAAAAGGCTCATTGAATGAAGACCAAAGCAGCAATGTGGATATGCCA
CAGATATTTCAGAACAGCGTCGAGACATGCATGAAGGTAAAATACATCGAAAAAATAAGT
ATTTGTCGAGTCTGTGGATATCAAATCACTTTGTCTGATGAATCCCATTCTGGTGTCATG
AAATCTCATGTGATGGAACATTCACTGAAAGAGCTATTACAAACCGGATCTAATGTGGAA
TTAAAGTTGAAACCGATAAAGCAAAATATGACTGAAACCAATCACGACAGCAAATATGTG
AAATCACGAAATAGGAAACAGCAAAGACCAAAACCAATAAGGTTGGCCACACCATCTGGC
TCAAAAATTGGAAATAATTTATTGCAAAGAGAAAATGCAAACCATGCAGTCAGTCACTGT
TACAATCTAACTGGTTTTGACTGCGATTTTATTATCTTTGCTGATATTTTGGTTTTAACG
ATTTTAGCATGTAGCTTTTTTGTTGTTACTACGAAGCACAAAAGAAATAATAACGTGTGC
ATTCGTTATGTAGTTCTTCCTGGTAAATTAAGAATATATTACATTAATGAACTTGAAACA
GAGGACTCTTATTCTGACTCAAAGATAAGTGCTTTCAAACCACAGAAATATGAAAACCTT
GTTGGCATTAACAGAGACGGGATAGTAGAAAATGTATGTGAAAGGTCAAATTCATCTTGT
TTTGGAAATTCCCTCTATTCCATCCAGGAATTCTTACTTTTTCCATCTACATGTTGTCAT
GGAAGAATGCCTCATACTTCTGCGACTTGGTCCTGGTCTGCTGGATCCTGTTGCACATAC
GGACGATTGCAACTCACTGTTGTTGATTCTAGCTTGCTGTTTGCTTTTGAAACCTAA

InterProScan

ProSitePatterns
Znf_C2H2_type (IPR013087) - T[126-148] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value