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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S13.g07232.01.t

Possible name(s)

Harore.CG.MTP2014.S13.g07232

Location

S13 [233,206 / 235,916]

Sequences

Amino acid sequence

Length: 309

>Harore.CG.MTP2014.S13.g07232.01.p
MAASSTINQQRILRDLSVSTALQQESVSVRLRFLALSPCKKRKFIEKYGEGEKEKPSTLK
RAVRWSQREIDALIDSIGQNATVILGPKTGSVTAATKKEAWINIREQVNLASCGTISRSV
HQVEHKWWDLKCNARMRVSMVNTKNESKKMTHQRSKYVIHKPTENDYKVMSVITGTYSSE
KKPIDKAVKQKIESKEEDNETLLDSHLPSLKENEKKKQSRLTRKRPWASVDTMNYRNGIG
DAHNKEDSEIAVPAIQDQVYDCEADKQFLLSFLPQLRQCTERQKSKFRTQMCMTIEKILH
GDDETTNQL

Nucleotide sequence

Length: 2,050

>Harore.CG.MTP2014.S13.g07232.01.t
ATCCAGATGATCGGGAACAGCCTTACGAGACAGTAACGAGCACATGACTGAAGGCAAACA
ATATGCGTTGTCATAAAGAAAAATATTGCTGCTGAATTTTCCTAAGGAGATAAGAATTAT
AACCACTCCTTCAAATACTGACTATACCAGATAGCAAAACGTGCTGACGGGATCCCGTAT
AATGATTTACTGCACTAGGCTAATACTAACTACCAAACAATAGACCAATAAATACACGTT
CGCGCAGTTTATACTCCGCCTCCGACTACACACGAGAGAGAAAATTACCGATCACTAAAC
ATCAATGTTATGCGAGGTCGCGCACAGCAGCATTTTTGGGTCGTGTTACTGTCGAACGAA
CAAATAAGAATAATCGAATGACGGCCACTGCGTAATGACTATAGAAAAATGGTATATTCC
TGTATGTGTAGAACGACCAGCGACAGCAAATAATTCAATTACAGTACTGTATTCCACTGC
AACATTCGTTCGATTTTATTAGTCGAAAAGGCCACTGTAGGCTATGCGCATGAATAGCAT
TTCTACCGGTGATGAAATACTTTTGATAATACCGAGAAAGAATGTGTCAAATCGAGATAT
ATCTAAATCCTCGGTAAAATGATAATTTTTTCCAGGAAAAAATAAAGTAATTAAATTTAC
GAGCATTGCTTGCTCCCCCATCTGTGCGCAACTCGCCAGGCTGTCTCGGTACTGCAACGA
GAGAAGACTTCGCTCGCAAACAAAAAAAGCGAGCGATTAACTGGCAAAATGGCCGCGTCA
AGTACTATTAACCAACAACGTATTTTACGAGATCTGTCAGTTAGTACTGCGCTTCAACAA
GAAAGCGTTAGCGTAAGACTGCGCTTTTTAGCGTTATCTCCCTGCAAGAAAAGGAAATTT
ATAGAGAAATATGGCGAAGGGGAAAAGGAAAAACCGAGCACTTTAAAGCGAGCGGTAAGA
TGGTCGCAACGAGAGATAGACGCTCTCATCGACTCTATAGGTCAAAACGCAACTGTAATA
CTCGGCCCAAAAACTGGATCAGTAACTGCAGCGACAAAGAAGGAGGCCTGGATTAATATC
AGAGAGCAGGTGAACCTTGCCAGTTGTGGTACCATCTCGCGTTCAGTACATCAGGTGGAA
CACAAATGGTGGGATTTGAAATGCAATGCAAGAATGAGGGTTTCCATGGTGAATACAAAA
AACGAATCAAAAAAGATGACACACCAGCGTTCCAAGTACGTCATTCATAAGCCCACAGAG
AATGATTATAAAGTGATGTCTGTCATAACTGGAACATACTCAAGTGAAAAAAAACCAATT
GACAAGGCAGTAAAACAAAAGATTGAGTCTAAGGAAGAAGACAATGAGACACTCCTGGAT
TCACATCTTCCTTCACTTAAAGAAAATGAGAAAAAAAAACAGAGTCGTTTAACAAGGAAG
AGACCATGGGCTAGCGTAGATACGATGAATTATCGGAACGGCATCGGAGATGCACATAAT
AAAGAAGATTCCGAAATAGCGGTACCAGCAATACAGGATCAGGTTTATGATTGTGAAGCT
GACAAGCAATTTCTACTGAGCTTCTTACCACAATTACGCCAATGTACCGAGAGACAAAAA
TCAAAATTCCGCACCCAAATGTGCATGACTATTGAAAAAATCCTGCATGGAGACGATGAA
ACAACTAACCAGCTTTAACAAGTTGTGTTGACTGGCTCATGGGGAATGACGTCATCCGAA
AAATCATGATGACTTCAAGAACCATGTTGGTCCAACAGTCAAGAAACTGAGTGGAAGACT
TTAACAACCCACTTTTTCTTCAGACAGAAATCACCCTGATCAAAATGTTAGTCAACTACT
TCAAAGGAGGTTAGGTACAGTGGTGCCACTTGAGAGGACACAAGAAGAAATATGAAGATC
CAGGAGATACTTTACAAGCAATATACTTTCAGATTAACTATTTTTTTAATTAAATTTTTA
CATAATCGAGATGTTGAGTTTTTGAAATGAACTGATAAAAAACTAACCTTTTTATATGCC
GCTTCATCAT

InterProScan

PANTHER
NAIF1 (IPR026753) - T[58-221] 4.1E-14
Pfam
Myb_DNA-bind_5 (IPR028002) - T[61-138] 1.6E-11
ProSiteProfiles
BESS_motif (IPR004210) - T[262-301] 10.593
Pfam
BESS_motif (IPR004210) - T[264-295] 7.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value