- Clone 'cigd008a13' >
- Transcript 'KH2012:KH.C11.319.v1...' >
- Transcript 'KH2012:KH.C5.392.v1....' >
- Transcript 'KH2012:KH.C1.1144.v1...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S13.g09951.01.t
Possible name(s)
FBXL2; FBXL20; FBXL4
Gene model
Location
S13 [500,219 / 503,706]
Amino acid sequence
Length: 614
>Harore.CG.MTP2014.S13.g09951.01.p
GVHLLILLKMQNYGESVIRQFAERVTSFSSQYGADISSSFSYCVENITGQPEIMPAYGDY
TKAAVLRTYGPWWKPTHSAEKKIRNSRPRSQAFFSEDYIELEFEKAVIPTSINIYETYNP
GAVVRILALHSSAEKILTADSSTALCPAWEILWECSASNPNVTSISSESRIFSPHLRPVR
FPCKLIRLEFNSRHLQYYTELDAVELIGTELLHLSSSVDPPNELLYQMSIGEEKLDGDAF
TQSKNILAGSNGYFNLLPSEILKYIFSLLSLPDLCRCAATCKLFCSLSYDPSQFTVIDLS
SCWHKVNNNALMSVIRHCTAGSNTSDEGDETPAQQIMVKSIDLSWCGGGSIASSHLIEHF
FKKCSSSMLMQLAIPSSPVVTDPVLSTIANTCSSLSFLDIQSCVNITQKGLEVLSGLHRL
ITLNLYRTKVDDDAILSIIRSNSSLKHLNLGSCIRVLDYDRVLTELSNCCPELCSLDCWR
ARNLTHVGIIAIAEKCRHLEELELGWCAGLQNDANCIQSLAMNCPTLTKLRVTANRTITD
ADVNALAQNCLYLEQLDILGTKLVSLSSVRRLLQSCENLKLLDVSFCFNFTKEAVNDLQE
SFPHVSIKRSFQDE
Nucleotide sequence
Length: 2,247
>Harore.CG.MTP2014.S13.g09951.01.t
AGGTGTACACTTATTAATCCTGTTAAAAATGCAGAATTATGGTGAAAGTGTCATTAGACA
ATTTGCTGAAAGAGTAACCTCTTTCAGTTCACAATATGGCGCGGACATCAGCAGCAGTTT
TTCATATTGTGTCGAAAACATAACTGGACAGCCAGAGATCATGCCAGCTTATGGTGATTA
TACTAAAGCAGCTGTCTTACGCACATATGGACCTTGGTGGAAACCCACTCACTCTGCTGA
AAAAAAAATAAGAAATTCACGTCCTAGGTCACAAGCTTTCTTCAGTGAAGATTACATAGA
ACTGGAGTTTGAAAAAGCAGTAATTCCAACATCAATAAATATTTATGAAACCTATAATCC
TGGAGCTGTAGTTCGGATTTTGGCGCTGCATTCTTCTGCAGAGAAGATCTTAACAGCAGA
CAGTTCTACAGCACTTTGTCCTGCTTGGGAGATTTTGTGGGAATGTTCTGCATCCAATCC
AAATGTTACGAGCATTTCGAGCGAATCACGCATATTTTCACCACATCTCCGGCCAGTCAG
ATTTCCATGCAAGCTTATCCGGTTGGAATTCAACAGTCGTCATTTGCAATATTATACAGA
ACTTGACGCAGTTGAACTTATAGGCACTGAATTACTCCACTTATCATCCTCTGTCGATCC
ACCCAATGAGTTGCTATATCAAATGTCAATCGGAGAAGAGAAACTAGATGGAGATGCATT
TACCCAATCGAAAAATATTCTAGCAGGAAGCAACGGATATTTTAATTTGCTTCCTAGTGA
AATACTGAAGTACATTTTCTCTCTTCTGTCCCTACCGGATTTGTGTCGTTGCGCAGCAAC
TTGCAAACTCTTTTGCAGTCTGAGTTATGATCCTTCACAGTTCACAGTGATTGATCTCAG
CTCATGTTGGCATAAGGTTAACAATAATGCTCTTATGAGTGTGATTAGGCATTGTACGGC
TGGCAGTAATACGAGTGACGAAGGTGATGAAACACCTGCACAACAAATTATGGTGAAATC
CATTGATCTATCTTGGTGTGGAGGTGGAAGCATTGCATCAAGCCATTTGATAGAACATTT
TTTCAAGAAGTGCAGTTCCTCCATGCTCATGCAATTAGCAATACCATCTTCACCGGTAGT
AACGGACCCAGTTCTCTCTACCATTGCAAATACATGTAGTTCTCTATCTTTTTTGGATAT
CCAGTCTTGTGTCAACATTACACAAAAAGGATTGGAAGTTCTTAGCGGTCTGCATCGCTT
GATCACCCTCAACCTCTACAGAACAAAGGTTGATGATGATGCAATTCTTAGTATTATTCG
GTCTAATTCAAGTCTGAAGCACCTAAATTTAGGTAGCTGCATACGAGTTTTAGACTACGA
CAGGGTACTCACCGAACTGTCAAACTGTTGTCCAGAACTGTGTTCGCTAGATTGCTGGCG
TGCACGTAATCTCACTCACGTCGGCATAATCGCAATAGCTGAAAAATGTAGGCACCTTGA
AGAACTGGAGCTAGGATGGTGCGCTGGGTTACAAAATGACGCGAACTGTATACAGTCTCT
TGCTATGAACTGCCCCACACTAACCAAATTACGAGTCACGGCGAATCGTACAATTACAGA
CGCAGATGTGAATGCTTTGGCACAAAATTGTCTATACTTGGAGCAGCTCGATATTCTTGG
CACAAAACTGGTCAGTCTGTCGTCCGTTCGTCGGCTTTTGCAAAGCTGTGAAAATCTAAA
ATTACTTGATGTCTCCTTCTGTTTCAATTTCACTAAAGAGGCTGTGAATGATTTACAAGA
ATCTTTTCCACACGTTAGTATCAAGCGAAGTTTCCAGGATGAATAAAAATGTACTTCGTC
GCTTTTATTTCATTGCTCCATTATAATACGGCCGAACCCATACTTCGGTGTTTCGGCTAT
TAACGTAGCAGTACCTTACTTATGGCTAAACTTATAGTCCAGTAGACATCCTGTATGAAT
GCAAGTATGTTCGACCTCGGTTAACTTGAACTGATTTGATGGTCTTGGTAAAATCACGAT
CAAAATACAGCGCATTTTTTTACTAGCATCTTATATGCCGAATTCTGGAACGTTTGAAGA
ACACAGCTAGCGGCATTCGGGCATTTTTCACGGTTAAAATTACAGCCGGTTTTAAGTACA
TTTTTTTTAGTAAAGTTTTTGAGACAGCAACTATGCATGTATAATATATGTTCAAACCGT
TACATGAAAATTGTTATGGTAAATTCA
| ProSiteProfiles |
F-box_dom (IPR001810) - T[251-306] 9.789 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[252-305] 1.2E-12 |
| Pfam |
F-box_dom (IPR001810) - T[256-291] 1.2E-8 |
| SMART |
F-box_dom (IPR001810) - T[257-296] 9.5E-4 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[300-435] 4.6E-11 - T[436-511] 1.2E-12 - T[512-610] 3.9E-14 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[392-417] 20.0 - T[470-495] 27.0 - T[496-523] 37.0 - T[524-549] 6.2 - T[550-575] 45.0 - T[576-601] 0.0077 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[523-547] 1.5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FXL20_HUMAN | 27.035 % | 109 | 1.13E-25 |
| FBXL4_HUMAN | 39.404 % | 405 | 2.67E-134 |
| FBXL2_HUMAN | 28.818 % | 115 | 9.06E-28 |