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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S147.g09898.01.t

Possible name(s)

LCAT; PLA2G15

Gene model

Harore.CG.MTP2014.S147.g09898

Location

S147 [200,453 / 203,107]

Sequences

Amino acid sequence

Length: 439

>Harore.CG.MTP2014.S147.g09898.01.p
MISFTLWNWFFVSITCLGAAESKYTLNASGKSSIVTPTIIVPGDAASPIYVKVNRKKSSS
DCPNKTNWYRLWLNITDLLPEGLHCTLENIRLVFHPSTNESTPPEGVQIKIPGWGTSKAV
EYVDDSLIARLLHVGYDAAPLVDEMVKWGYERDISIRGAPYDFRLAMASQPDLFVRLKHL
VEDTWAMNKGRKVAILSHSLGGLYATWFLNGQTQEWKDKFIHSFITLSTPWGGSRKTIKV
LTSGVNFEIPFLSPLVGRKVERTFESNYLLLPNRYFFEPDDIFVFTEKRNYTLTPNEMDS
YFMEIGNPVGRLIYHKVKEQNRYTRKVNGVIKHYDGMPPHPRVRTYCLYGVGVKSIGGFR
YKKNFPDGPPEYMTADGDGSISVNSLSGCKYWIRDHPSASNYNSTYHTRQFSFHDVSHVE
IFGSGDAQNVIHSILTGKI

Nucleotide sequence

Length: 1,712

>Harore.CG.MTP2014.S147.g09898.01.t
ACTTACAGTTCTTCTGGTTTGTGAATGTGAATGAGTTGGTTTTCTTTGTAGGTTAGTATT
TGCAATATGATTTCTTTTACGTTGTGGAATTGGTTTTTCGTTAGCATTACATGCCTTGGA
GCGGCTGAGTCGAAGTATACACTAAATGCCTCAGGCAAAAGCTCGATAGTAACTCCTACA
ATAATCGTTCCGGGAGATGCTGCAAGTCCTATATACGTCAAAGTGAACAGAAAAAAATCG
TCATCTGACTGTCCTAACAAAACAAACTGGTATCGTTTGTGGCTTAATATCACGGATTTG
TTGCCCGAAGGCCTGCATTGCACTCTAGAAAACATTCGTCTCGTTTTTCACCCTTCGACG
AACGAAAGCACACCGCCAGAAGGAGTTCAGATCAAGATTCCAGGATGGGGTACGTCGAAG
GCCGTGGAATATGTTGACGATAGCTTAATTGCTAGACTACTGCATGTTGGTTATGATGCA
GCCCCACTGGTCGATGAAATGGTGAAGTGGGGATACGAGAGAGACATATCGATAAGAGGT
GCCCCATACGACTTCAGACTTGCAATGGCTTCTCAGCCTGATCTATTTGTAAGGTTGAAA
CATCTGGTTGAGGACACCTGGGCAATGAACAAAGGAAGAAAGGTTGCAATATTATCGCAC
AGTTTGGGAGGACTTTACGCAACGTGGTTCTTAAACGGACAAACGCAAGAATGGAAGGAC
AAATTTATCCATTCGTTCATTACTCTTTCTACTCCATGGGGAGGATCGAGGAAGACGATA
AAGGTTTTAACGTCAGGAGTGAATTTTGAAATTCCCTTTTTGAGTCCTCTTGTTGGGAGG
AAAGTAGAGCGAACATTTGAATCAAATTATCTCCTACTGCCTAATCGATATTTCTTCGAA
CCAGACGACATATTCGTTTTTACCGAGAAGAGGAATTATACTCTCACGCCAAACGAGATG
GATTCCTATTTTATGGAAATCGGCAACCCCGTCGGTCGTCTGATTTATCATAAGGTCAAA
GAGCAAAATCGCTACACAAGGAAGGTCAACGGAGTCATTAAACATTATGACGGCATGCCA
CCTCATCCGCGTGTCAGGACCTATTGTCTGTACGGAGTGGGCGTGAAATCAATAGGAGGA
TTTCGATACAAGAAGAATTTTCCCGACGGGCCGCCGGAATACATGACGGCGGATGGAGAC
GGCTCTATATCCGTTAATAGCCTTAGCGGGTGTAAATATTGGATCAGGGATCACCCTTCG
GCCAGCAATTACAACAGTACGTACCACACACGACAGTTTTCTTTCCATGACGTGTCCCAT
GTCGAGATATTCGGGTCTGGGGATGCGCAGAACGTCATACATTCAATTCTGACCGGTAAA
ATATAAGATACCTATTTGAGGTTTATGTAGACAGTGCAATGGACTAATCTGTTTTTTAAT
TCGGAGTAATAATCTGGAATATCGCATTTTATATACACGATCAAATTACTACTACTACGT
TATTGCACATTAGGTAATAATCAGAACAAATTGGTTGTCTTCAAAACTCATATGTTTGAT
TGAATGTTTCTGCCATGTTTCTTCATGATTCCTGGTATCACACTGGTCCAAAAATGAACT
TTTTCCTCGGCGAGATTCCGGTCTATGCCGATTGGGTTGTCCAAGATTAAATAGTTCTTT
TTGCGGTTAAATTCCGGCCAGTAGACTTCAAC

InterProScan

Pfam
LACT/PDAT_acylTrfase (IPR003386) - T[70-423] 1.5E-57
Gene3D
AB_hydrolase (IPR029058) - T[86-273] 7.3E-40 - T[305-439] 1.5E-8
SUPERFAMILY
AB_hydrolase (IPR029058) - T[139-387] 1.38E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PAG15_HUMAN 34.916 % 219 3.55E-67
LCAT_HUMAN 31.436 % 195 1.2E-57