- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S147.g10997.01.t
Possible name(s)
CTBP1; GRHPR; PHGDH
Gene model
Location
S147 [44,471 / 46,025]
Amino acid sequence
Length: 517
>Harore.CG.MTP2014.S147.g10997.01.p
MSVSITKVLLLDNVDPSAKNILESNGIKATICKEKLSAEDLVKTLRDHDGVVVRSATKIT
ESIIESCKSLNIIGRAGTGVDNIDVKAATKNNIVVMNTPNGNTLSAAEHTCALICSLSRN
IPAADAHVKAGKWDRKAFMGNELFGKTLAIVGLGRIGMEVAQRMQSFGMTTIGYDPIVGA
DEANKSNIEWMQLKEIWPLADYITVHTPLIPQTRGLINAASLELCKSGVKLINCARGGII
DEDDLLKALESGKCGGAGLDVFVTEPTTNMTLCNHPKVIACPHLGASTKEGQARCGKDIA
QQFVDVSSGKSYFGVINGHAMLQDTQKWKDVSVALGRAMNAMLGSVKNNKLFLRTGKDLS
KYGKTLSAAACLGLLRDSKVTLMNSVLLAADHGIEVKYESVDNIPGLCSLESVSELKFIK
LCGMVIADKPVLLSINGSAFATPIIMEGSALLVKTSAPSKDMQSAISALAAKGINVSSLS
LAQKDGGDKWIGMALSKGLSDSTESLLPGLEAVAVQF
Nucleotide sequence
Length: 1,554
>Harore.CG.MTP2014.S147.g10997.01.t
ATGTCCGTGTCTATCACCAAAGTTCTTTTGTTGGACAACGTCGATCCGTCGGCAAAAAAT
ATTTTAGAATCCAATGGCATTAAAGCAACTATCTGTAAAGAAAAGTTGTCGGCCGAAGAT
TTGGTGAAGACCTTGAGAGATCACGACGGTGTCGTCGTTCGTTCGGCCACAAAAATCACA
GAGAGCATAATAGAATCATGCAAGTCCCTGAATATCATAGGCAGAGCTGGTACCGGAGTT
GATAACATAGACGTTAAGGCGGCCACCAAAAATAACATCGTAGTTATGAATACACCGAAC
GGTAATACTTTAAGTGCTGCAGAACACACTTGCGCTTTGATCTGCTCGTTGTCTCGTAAT
ATCCCGGCGGCCGACGCGCATGTTAAGGCGGGAAAGTGGGACCGCAAGGCGTTCATGGGT
AACGAATTATTTGGCAAAACTTTGGCTATAGTCGGGCTCGGTAGAATTGGAATGGAAGTT
GCTCAAAGAATGCAGTCATTTGGGATGACCACCATCGGTTACGATCCAATTGTAGGTGCG
GATGAGGCGAACAAATCCAATATTGAGTGGATGCAGCTGAAAGAAATATGGCCCCTCGCC
GACTACATTACAGTTCACACTCCTCTTATCCCGCAAACACGAGGCTTGATAAACGCTGCT
TCTTTGGAGTTGTGCAAATCTGGGGTCAAGTTGATAAATTGTGCCAGAGGTGGAATCATA
GATGAAGATGATCTTCTGAAGGCATTGGAGTCGGGAAAGTGTGGCGGTGCTGGCCTTGAC
GTCTTTGTAACCGAGCCGACCACGAACATGACATTGTGCAACCACCCTAAAGTCATTGCT
TGTCCTCATCTGGGGGCTAGTACTAAAGAGGGTCAAGCTAGATGTGGAAAAGATATTGCA
CAGCAATTTGTTGATGTAAGTTCAGGAAAAAGTTATTTTGGAGTCATAAACGGTCATGCT
ATGCTACAAGACACACAAAAGTGGAAGGACGTCTCCGTGGCATTGGGCCGCGCCATGAAT
GCCATGTTGGGTTCTGTCAAAAACAACAAACTCTTCCTTCGCACTGGTAAAGACCTATCG
AAGTACGGAAAGACTCTAAGTGCCGCAGCATGTCTCGGATTGTTGCGTGACAGCAAAGTT
ACTTTGATGAATTCAGTATTGTTGGCTGCAGATCATGGAATTGAAGTGAAATATGAATCT
GTTGATAATATTCCTGGCTTGTGTTCACTGGAAAGTGTTTCTGAGCTAAAATTCATCAAA
CTATGTGGCATGGTTATTGCAGACAAACCTGTCTTGCTCAGCATCAATGGTAGTGCCTTT
GCGACACCCATCATTATGGAGGGAAGTGCTCTCTTGGTCAAGACATCTGCGCCATCAAAG
GACATGCAGTCGGCTATAAGTGCCTTAGCTGCCAAAGGCATCAATGTCAGTTCATTGTCC
CTGGCACAAAAGGATGGAGGGGATAAGTGGATAGGCATGGCTTTGTCAAAGGGTTTGTCT
GATTCAACCGAAAGTCTGTTGCCTGGGTTGGAGGCTGTGGCTGTCCAATTTTAA
| Pfam |
D-isomer_2_OHA_DH_cat_dom (IPR006139) - T[8-313] 2.8E-34 |
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[105-286] 2.07E-54 |
| Pfam |
D-isomer_DH_NAD-bd (IPR006140) - T[112-285] 5.7E-57 |
| ProSitePatterns |
D-isomer_DH_CS1 (IPR029752) - T[148-175] . |
| SUPERFAMILY |
ASB_dom_sf (IPR029009) - T[326-438] 7.32E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRHPR_HUMAN | 30.798 % | 118 | 1.27E-29 |
| SERA_HUMAN | 44.867 % | 435 | 2.18E-148 |
| CTBP1_HUMAN | 28.435 % | 123 | 1.28E-30 |