- Clone 'man15e24' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S148.g10550.01.t
Possible name(s)
ZNF18; ZNF226; ZNF568
Gene model
Location
S148 [72,939 / 73,347]
Amino acid sequence
Length: 135
>Harore.CG.MTP2014.S148.g10550.01.p
MYIRDISFSRKSSLNSHMRRRLLTHTKEKLLQCCLCPAKFLLNRNCDRHKKCIHGVMYCK
CSVFGYQFTSKYDLKVHKEKHKGSDSQYHCEVCDLIFRNLHNLSEHMRVHTREKPFECEI
CDRPFQYLHNMKVHI
Nucleotide sequence
Length: 408
>Harore.CG.MTP2014.S148.g10550.01.t
ATGTATATTCGCGATATATCGTTCAGTCGGAAATCAAGCTTGAATTCTCACATGAGGAGA
CGTCTGTTAACGCACACAAAGGAGAAATTATTGCAATGTTGTTTGTGCCCTGCAAAATTT
TTACTAAATAGGAATTGCGACAGACACAAGAAATGCATACATGGTGTAATGTACTGCAAG
TGTTCGGTATTTGGATATCAATTCACATCTAAATATGATTTGAAGGTACATAAAGAAAAA
CATAAAGGATCTGATAGCCAATATCATTGTGAAGTTTGTGATTTAATATTTAGAAATCTC
CATAATTTGTCTGAACATATGAGAGTTCATACGAGGGAAAAACCATTCGAATGTGAAATA
TGTGATAGACCATTCCAATATCTTCATAACATGAAAGTGCACATATGA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[7-68] 1.96E-6 - T[68-125] 1.16E-14 |
| SMART |
Znf_C2H2_type (IPR013087) - T[31-54] 37.0 - T[59-81] 29.0 - T[88-110] 7.9E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[33-54] . - T[90-110] . |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[88-115] 14.025 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN226_HUMAN | 35.156 % | 80.9 | 8.27E-19 |
| ZN568_HUMAN | 34.884 % | 79.7 | 2.41E-18 |
| ZNF18_HUMAN | 33.594 % | 79.7 | 2.23E-18 |