- Transcript 'KH2012:KH.C1.264.v3....' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- EST 'FF756382.1' >
- Transcript 'KH2012:KH.L87.47.v2....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S14.g07949.01.t
Possible name(s)
CLPX; PSMC5; YME1L1
Gene model
Location
S14 [242,340 / 248,819]
Amino acid sequence
Length: 691
>Harore.CG.MTP2014.S14.g07949.01.p
MSALFFAHPCHSSKMAVSFRSSSTLTSRVGKFVNNKQPEFSRVIGSGTRTKPSSVLSSCM
PFTSSCIDLCEGVDSSRKKWPVPSTNTYLNGYSFPTENPFWNSESQRDFVTLSQVTESSK
SKGSSDGPGMKNGGDKGSNTQDSKNTKKGKGGGSGNSNTGIICPKCGDPTQHVTAVTNRF
VKCSQCQNFFSVTENENAKEQEGVHSRDGPWQNKPPPPPKKIREYLDRYVVGQSDAKKVL
SVAVYNHYKRIFNNAPAPTRQSQVQSDDRPQHMYSSRDVLHMAGIPPGTGLGHGPGSSMR
EELYSDPSSRGVGKLKPKAIAEAIDNDKDSSVVLEKSNILMLGPTGSGKTLLAQTLARCL
DVPFAICDCTTLTQAGYVGEDIESVIGKLLQDANANVEKAQQGIVFLDEVDKIGSVPGVH
QLRDVGGEGVQQGLLKMLEGTIVNVPERNSRKLRGESVAIDTTNILFVASGAFNGLDKII
ARRKNEKSLGFATEPKASRTTHTLQTSDNWSSGLGFTPKETATALQENLERDELLRVTEA
CDLMEFGMIPEFVGRLPITVALHSLTAEHLMQILTEPKNAIVQQFQALFNMDNADLAITP
CALNAIAGLALERKTGARGLRSMMETLLLEAMYEVPGSDIIGVCVDKDVVKGKKAPDYIR
APVVAKDVNSDKADDINDNSTEENSDSRLAL
Nucleotide sequence
Length: 3,099
>Harore.CG.MTP2014.S14.g07949.01.t
ATGTCAGCTCTTTTTTTTGCTCATCCCTGTCACTCTTCAAAAATGGCAGTGTCGTTTCGC
AGCAGCTCCACGCTCACTAGCCGCGTTGGAAAATTTGTTAATAATAAGCAGCCAGAATTT
TCGAGAGTTATTGGATCTGGTACCAGGACAAAACCATCCTCAGTATTGTCAAGTTGTATG
CCTTTCACGAGTTCGTGCATCGATTTATGTGAAGGCGTGGATTCTTCACGTAAGAAGTGG
CCGGTTCCGTCTACTAATACCTATCTAAATGGTTATAGCTTCCCAACAGAGAATCCGTTT
TGGAATTCGGAATCGCAGAGAGATTTTGTGACGCTTAGCCAAGTCACTGAGTCATCTAAA
AGCAAAGGATCCTCTGATGGACCCGGCATGAAAAATGGAGGTGACAAGGGAAGCAATACT
CAAGACAGTAAAAACACCAAGAAGGGGAAAGGAGGAGGGTCTGGGAACAGTAATACTGGG
ATCATTTGTCCGAAATGCGGAGATCCAACACAGCATGTCACCGCCGTTACCAACAGATTT
GTCAAGTGCAGCCAGTGCCAGAACTTTTTCTCTGTTACTGAGAATGAAAATGCGAAAGAA
CAGGAAGGTGTACATAGTCGTGATGGGCCTTGGCAGAACAAACCACCGCCCCCTCCTAAA
AAGATCCGCGAGTATCTCGATAGATACGTTGTTGGCCAGAGCGACGCAAAAAAAGTGCTC
TCCGTTGCAGTTTATAATCATTACAAACGAATTTTTAATAACGCCCCTGCCCCGACAAGA
CAGAGTCAAGTACAAAGCGATGATCGTCCCCAGCATATGTATTCTTCAAGAGATGTTTTG
CATATGGCTGGTATTCCACCGGGAACTGGACTAGGGCATGGACCCGGTAGCTCAATGAGA
GAAGAATTATATTCAGACCCATCAAGCAGAGGTGTCGGTAAATTAAAACCGAAAGCAATA
GCAGAAGCGATCGACAACGATAAAGATAGCTCTGTGGTCCTTGAAAAGAGCAATATTTTG
ATGTTGGGACCTACTGGGTCAGGTAAAACCCTTCTTGCACAAACCCTTGCTCGTTGCCTC
GATGTACCCTTTGCGATTTGCGATTGTACTACTCTCACGCAAGCTGGATATGTGGGTGAA
GACATCGAGTCTGTAATCGGAAAACTCTTGCAAGATGCGAACGCGAATGTTGAGAAGGCG
CAACAAGGTATTGTGTTTCTCGATGAGGTTGACAAGATTGGGAGTGTGCCAGGGGTGCAT
CAGCTCCGTGATGTTGGCGGAGAAGGTGTCCAACAGGGCCTTCTTAAGATGCTCGAGGGA
ACAATTGTTAATGTCCCAGAAAGAAACTCTCGCAAGTTACGTGGAGAGTCGGTTGCCATT
GACACAACAAACATACTTTTTGTTGCGTCTGGGGCCTTCAATGGACTGGATAAGATAATA
GCAAGGAGGAAAAATGAAAAGTCTTTGGGATTTGCAACAGAACCAAAAGCTTCTCGCACT
ACTCACACTTTGCAGACCAGCGACAATTGGTCATCTGGATTAGGATTCACACCAAAAGAG
ACCGCAACAGCGCTGCAAGAAAATCTGGAAAGGGATGAATTACTACGCGTTACAGAGGCA
TGCGATCTTATGGAATTTGGCATGATACCAGAGTTTGTTGGACGGCTACCTATCACCGTC
GCCTTGCATAGTTTGACTGCAGAGCATCTCATGCAGATTCTAACAGAACCTAAAAATGCA
ATTGTTCAGCAATTTCAGGCACTTTTCAACATGGACAATGCTGATTTAGCAATCACACCT
TGTGCTCTCAATGCAATTGCTGGTCTTGCCTTGGAAAGGAAAACTGGGGCAAGAGGTTTA
CGGTCCATGATGGAAACTCTACTTCTGGAAGCTATGTACGAGGTACCAGGTAGCGATATA
ATCGGGGTTTGTGTAGATAAAGATGTTGTCAAAGGAAAAAAGGCACCGGATTACATCAGG
GCTCCTGTTGTGGCCAAGGATGTGAACAGCGATAAAGCAGATGACATAAATGACAATTCC
ACGGAAGAAAATTCGGATTCACGTTTAGCATTGTAATTTGTTCGAAAACTTCATTAGTAG
TGTTACTTCATTCTTGCAAAAGACTGATTGCAACTATATCCTTAATGATGGTTAGGTTAA
CACATATAAATTCAGTATTTTGATCAGGATGACTGTGTCTTTTATTTTAGAAATAGGGTC
TTATAGTGGCCATCATCTTATCTAATCCATCATAGCCGTACTATAGCCTGACCTACTTGT
GCTGTACTGCATAATTTGGTTAATTTGTAATGGTCTTTGTAATAGTGCAACTAAATTATT
TTAATTTTATAGGACATTTATGATGTGTGGTACAGTTTAGTAGTACTGCCATTAGCCTGT
GTGTGGTGGGTTTTTTTGTATATCTTCTATTAAATAATCCCATAAACGAAATAATAATAT
AGTTAATGAAAAAAAATTGTAAGTTCAAAAAAATGTCGTAGTTGTTTCGCACGTATTTGG
TTAAAAATATTCGTTTTCTCGGAGAATATGGTTTTAATGTAAAAATCTCGTTCATTCACT
TCATTTGAAATTTAACCTAACTGTCTATGACTACAGTAGCCAGATAAGTTTCATTTCAAT
GAATTGTATGCAATAAATTCGAAAGGGGAAGTACTTTTCCTGATGTATGCAAGAATATGC
AGTGTATGAACAACAATGATTTTATTATTACTTATTTCGCATTACCACACAAACGAATGA
ATAAAGACGGATTTAAAAAAAAAAGGTTCCCTGTACTGACAGAAATGATGTGTGTTTCTT
TTCAGCCATTGGCATAGTAATGTGATGATCAGTAACTGACTTACTGTCGCCCGGAACAAC
TCCTGAAAATACCGCCTCTATAAAGGTACTTTGTACGACGCTACCGCCACACTCATGCGA
TCCGTCCACAACAAAGCTTTTCCGACTTCAACATTAAACACTTATCAAATAAGTTCACTG
ATAACGGAGGCAGTCTGGAAATATGGAATTTAAAATAAAAAATGGAAGCGTTGTTTTAAC
TAACATTATTTTTGAAATTTCAATATAACCTGTGGTTGC
| PANTHER |
Clp_protease_ATP-bd_su_ClpX (IPR004487) - T[160-675] 6.0E-182 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[217-250] 1.33E-54 - T[326-494] 1.33E-54 - T[525-649] 1.33E-54 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[335-558] 9.0E-40 |
| SMART |
AAA+_ATPase (IPR003593) - T[335-486] 1.7E-12 |
| Pfam |
Clp_ATPase_C (IPR019489) - T[565-636] 5.1E-11 |
| SMART |
Clp_ATPase_C (IPR019489) - T[565-659] 8.6E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLPX_HUMAN | 58.07 % | 575 | 0 |